Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 7.0e-81 303.9 154 100.0
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 3.0e-60 235.3 154 78.6
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 2.0e-59 232.6 154 76.6
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 3.4e-59 231.9 154 77.3
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 1.0e-55 220.3 153 73.2
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 2.8e-53 212.2 155 69.7
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 3.6e-53 211.8 153 73.2
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 1.7e-50 203.0 154 69.5
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 2.9e-50 202.2 153 69.9
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 4.9e-50 201.4 155 66.5
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 4.9e-50 201.4 153 69.3
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 1.9e-49 199.5 153 66.7
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 1.9e-49 199.5 153 64.7
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 3.2e-49 198.7 154 68.2
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 7.0e-49 197.6 153 64.7
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 9.2e-49 197.2 129 76.0
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 1.2e-48 196.8 149 67.1
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 2.0e-48 196.1 153 69.3
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 2.7e-48 195.7 150 66.7
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 4.6e-48 194.9 150 63.3
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 6.0e-48 194.5 150 67.3
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.8e-48 194.1 156 63.5
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.8e-48 194.1 156 63.5
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 7.8e-48 194.1 153 68.6
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.7e-47 193.0 137 68.6
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 3.0e-47 192.2 156 65.4
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 3.9e-47 191.8 153 68.0
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 6.6e-47 191.0 123 73.2
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 8.6e-47 190.7 150 65.3
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 1.5e-46 189.9 134 71.6
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 3.3e-46 188.7 151 64.2
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 7.3e-46 187.6 150 64.7
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 9.5e-46 187.2 126 71.4
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 1.6e-45 186.4 150 62.0
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 2.1e-45 186.0 168 61.3
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 1.1e-44 183.7 124 71.0
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 4.0e-44 181.8 145 64.1
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 6.8e-44 181.0 144 66.0
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 8.9e-44 180.6 148 63.5
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 2.0e-43 179.5 153 59.5
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 5.8e-43 177.9 124 68.5
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 7.5e-43 177.6 148 62.2
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 7.5e-43 177.6 128 68.8
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 7.5e-43 177.6 125 69.6
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 7.5e-43 177.6 128 67.2
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 9.8e-43 177.2 126 69.8
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 1.3e-42 176.8 136 66.2
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 1.3e-42 176.8 159 62.3
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 1.7e-42 176.4 129 66.7
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.7e-42 176.4 120 73.3
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 2.9e-42 175.6 145 61.4
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 2.9e-42 175.6 120 70.0
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 3.7e-42 175.3 128 66.4
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 4.9e-42 174.9 120 69.2
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 4.9e-42 174.9 120 69.2
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 4.9e-42 174.9 120 69.2
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 4.9e-42 174.9 154 57.8
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 6.4e-42 174.5 145 61.4
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 6.4e-42 174.5 154 58.4
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 1.1e-41 173.7 148 61.5
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 1.4e-41 173.3 128 64.8
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 1.9e-41 172.9 120 69.2
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 3.2e-41 172.2 125 67.2
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 4.1e-41 171.8 148 58.8
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 5.4e-41 171.4 124 68.5
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 5.4e-41 171.4 128 63.3
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 9.2e-41 170.6 120 65.8
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 9.2e-41 170.6 121 69.4
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 1.6e-40 169.9 133 65.4
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 2.1e-40 169.5 121 69.4
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 3.5e-40 168.7 146 56.2
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 6.0e-40 167.9 122 60.7
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 6.0e-40 167.9 121 68.6
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 7.8e-40 167.5 121 65.3
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.0e-39 167.2 123 66.7
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.0e-39 167.2 127 65.4
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 3.0e-39 165.6 141 58.2
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 5.1e-39 164.9 141 58.2
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 5.1e-39 164.9 128 61.7
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 8.6e-39 164.1 123 62.6
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 1.5e-38 163.3 120 65.8
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 1.5e-38 163.3 122 62.3
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 3.3e-38 162.2 122 65.6
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 4.3e-38 161.8 191 49.7
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 4.3e-38 161.8 127 70.1
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 1.2e-37 160.2 121 60.3
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.2e-37 160.2 156 56.4
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 1.6e-37 159.8 149 59.7
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 4.7e-37 158.3 151 57.6
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 6.2e-37 157.9 125 70.4
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 6.2e-37 157.9 155 55.5
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.1e-36 157.1 163 56.4
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 5.4e-33 144.8 98 71.4
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 1.2e-32 143.7 126 61.1
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 7.8e-32 141.0 102 68.6
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 7.8e-32 141.0 120 59.2
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 3.9e-31 138.7 167 46.7
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 3.9e-31 138.7 119 52.9
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.1e-30 137.1 122 55.7
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.5e-30 136.7 122 55.7
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 5.6e-30 134.8 94 69.1
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 6.2e-29 131.3 99 64.6
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 1.1e-28 130.6 115 58.3
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.1e-28 130.6 103 55.3
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 5.2e-28 128.3 120 50.8
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 2.0e-27 126.3 122 50.0
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 5.8e-27 124.8 95 63.2
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 3.8e-26 122.1 94 66.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 6.4e-26 121.3 96 63.5
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 1.7e-23 113.2 92 64.1
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.9e-23 112.1 90 65.6
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 3.6e-21 105.5 101 47.5
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 4.0e-20 102.1 90 58.9
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 2.0e-19 99.8 101 47.5
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 4.2e-17 92.0 99 46.5
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 4.2e-17 92.0 74 62.2
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.5e-16 89.0 94 52.1
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.0e-15 87.4 71 57.7
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 2.3e-15 86.3 155 38.1
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 2.4e-12 76.3 108 33.3
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 1.2e-11 73.9 84 50.0


User provided reference genes

Program Settings