Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p066700 Quercus lobata HOM05D004087 ORTHO05D004787 1.3e-68 263.5 192 100.0
CiPaw.06G078300 Carya illinoinensis HOM05D004087 ORTHO05D004787 2.4e-30 136.3 193 52.3
Haze_12080 Corylus avellana HOM05D004087 ORTHO05D004787 4.5e-29 132.1 192 54.2
Ciclev10032809m.g Citrus clementina HOM05D004087 ORTHO05D004787 3.6e-26 122.5 194 45.9
Cfa009049 Carpinus fangiana HOM05D004087 ORTHO05D004787 2.6e-24 116.3 194 53.1
GSVIVG01020122001 Vitis vinifera HOM05D004087 ORTHO05D004787 6.3e-23 111.7 198 44.9
Glyma.02G025600 Glycine max HOM05D004087 ORTHO05D004787 1.4e-22 110.5 202 50.5
Lalb_Chr05g0217411 Lupinus albus HOM05D004087 ORTHO05D004787 1.2e-21 107.5 196 44.4
Glyma.01G039100 Glycine max HOM05D004087 ORTHO05D004787 2.0e-21 106.7 193 42.5
Actinidia01168 Actinidia chinensis HOM05D004087 ORTHO05D004787 2.7e-21 106.3 200 42.5
Gohir.D04G136500 Gossypium hirsutum HOM05D004087 ORTHO05D004787 2.7e-21 106.3 193 43.5
Gorai.012G120300 Gossypium raimondii HOM05D004087 ORTHO05D004787 2.7e-21 106.3 193 43.5
Manes.05G094600 Manihot esculenta HOM05D004087 ORTHO05D004787 2.7e-21 106.3 201 42.3
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 5.9e-21 105.1 191 41.9
VMungo1215G1106 Vigna mungo HOM05D004087 ORTHO05D004787 2.3e-20 103.2 199 45.2
Phvul.002G079300 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.9e-20 102.8 198 45.5
Atru.chr11.1891 Acer truncatum HOM05D004087 ORTHO05D004787 6.6e-20 101.7 65 81.5
TPR.G26706 Trifolium pratense HOM05D004087 ORTHO05D004787 8.6e-20 101.3 197 41.1
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea HOM05D004087 ORTHO05D004787 1.5e-19 100.5 63 85.7
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea HOM05D004087 ORTHO05D004787 1.5e-19 100.5 63 85.7
Hma1.2p1_0289F.1_g114450 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 2.5e-19 99.8 217 38.2
COL.COLO4_36242 Corchorus olitorius HOM05D004087 ORTHO05D004787 3.3e-19 99.4 67 80.6
PGR119G1273 Punica granatum HOM05D004087 ORTHO05D004787 3.3e-19 99.4 67 76.1
Eucgr.B02582 Eucalyptus grandis HOM05D004087 ORTHO05D004787 5.5e-19 98.6 197 40.6
Lj2g0011291 Lotus japonicus HOM05D004087 ORTHO05D004787 7.2e-19 98.2 63 79.4
Dinv24938 Davidia involucrata HOM05D004087 ORTHO05D004787 9.5e-19 97.8 67 79.1
TAR622G0570 Trochodendron aralioides HOM05D004087 ORTHO05D004787 1.2e-18 97.4 143 49.0
Medtr5g037230 Medicago truncatula HOM05D004087 ORTHO05D004787 1.6e-18 97.1 196 41.3
Sabra08G0144800 Salix brachista HOM05D004087 ORTHO05D004787 2.3e-17 93.2 67 76.1
Psat2g117160 Pisum sativum HOM05D004087 ORTHO05D004787 4.0e-17 92.4 63 77.8
Rhsim12G0127500 Rhododendron simsii HOM05D004087 ORTHO05D004787 4.0e-17 92.4 68 76.5
Nitab4.5_0000710g0070 Nicotiana tabacum HOM05D004087 ORTHO05D004787 6.8e-17 91.7 67 70.1
Potri.008G190900 Populus trichocarpa HOM05D004087 ORTHO05D004787 8.9e-17 91.3 204 38.7
Peaxi162Scf00187g00617 Petunia axillaris HOM05D004087 ORTHO05D004787 1.2e-16 90.9 67 70.1
PGSC0003DMG400001914 Solanum tuberosum HOM05D000067 ORTHO05D000097 1.5e-16 90.5 66 68.2
CAN.G300.5 Capsicum annuum HOM05D004087 ORTHO05D004787 4.4e-16 89.0 196 41.3
MBI01_g41231_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 7.5e-16 88.2 67 74.6
THA.LOC104822080 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 7.5e-16 88.2 63 73.0
Solyc04g005120.3 Solanum lycopersicum HOM05D004087 ORTHO05D004787 2.8e-15 86.3 63 69.8
Sopen04g001140 Solanum pennellii HOM05D004087 ORTHO05D004787 2.8e-15 86.3 63 69.8
PSO832G0995 Papaver somniferum HOM05D004087 ORTHO05D004787 3.7e-15 85.9 64 76.6
Ca_28186_v3 Cicer arietinum L. HOM05D004087 ORTHO05D004787 4.9e-15 85.5 196 54.6
PSO591G0142 Papaver somniferum HOM05D004087 ORTHO05D004787 6.3e-15 85.1 64 76.6
Aqoxy3G03190 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 1.4e-14 84.0 189 41.8
vmacro16306 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 1.4e-14 84.0 201 60.7
AL2G29180 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 6.6e-12 75.1 56 67.9
AT1G69935 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 6.6e-12 75.1 56 67.9
Thhalv10019201m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 6.6e-12 75.1 56 69.6
BcaB03g14773 Brassica carinata HOM05D004087 ORTHO05D004787 1.5e-11 73.9 56 67.9
BcaC08g46444 Brassica carinata HOM05D004087 ORTHO05D004787 2.5e-11 73.2 56 66.1
C06p43810 Brassica napus HOM05D004087 ORTHO05D004787 2.5e-11 73.2 56 66.1
BolC6t39453H Brassica oleracea HOM05D004087 ORTHO05D004787 2.5e-11 73.2 56 66.1
CARHR063040 Cardamine hirsuta HOM05D004087 ORTHO05D004787 2.5e-11 73.2 55 69.1
Sp5g25060 Schrenkiella parvula HOM05D004087 ORTHO05D004787 3.3e-11 72.8 56 66.1
A07p36390 Brassica napus HOM05D004087 ORTHO05D004787 5.6e-11 72.0 56 66.1
BraA07t31211Z Brassica rapa HOM05D004087 ORTHO05D004787 2.1e-10 70.1 56 64.3
Carub.0002s1665 Capsella rubella HOM05D004087 ORTHO05D004787 6.1e-10 68.6 56 62.5
Nn1g03866 Nelumbo nucifera HOM05D004087 ORTHO05D004787 2.3e-09 66.6 44 75.0
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 7.5e-08 61.6 63 54.0
vmacro01944 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 2.2e-07 60.1 53 60.4
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 2.9e-07 59.7 55 60.0
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 2.9e-07 59.7 55 60.0
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 2.9e-07 59.7 55 60.0
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 2.9e-07 59.7 55 60.0
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 2.9e-07 59.7 55 60.0
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 2.9e-07 59.7 54 57.4
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 3.7e-07 59.3 71 49.3
MD05G1106700 Malus domestica HOM05D004087 ORTHO05D004787 3.7e-07 59.3 71 50.7
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 4.9e-07 58.9 54 57.4
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 6.4e-07 58.5 57 57.9
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 8.3e-07 58.2 54 57.4
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 8.3e-07 58.2 52 59.6
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 8.3e-07 58.2 52 59.6
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 8.3e-07 58.2 55 56.4
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 1.1e-06 57.8 55 54.5
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 1.1e-06 57.8 55 58.2
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 1.1e-06 57.8 55 58.2
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 1.1e-06 57.8 54 59.3
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 1.1e-06 57.8 69 50.7
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 1.1e-06 57.8 55 52.7
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 1.1e-06 57.8 55 52.7
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 1.4e-06 57.4 55 58.2
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 1.4e-06 57.4 55 58.2
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 1.4e-06 57.4 55 58.2
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 1.4e-06 57.4 55 58.2
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 1.4e-06 57.4 55 58.2
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 1.4e-06 57.4 52 59.6
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 1.4e-06 57.4 50 64.0
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 1.4e-06 57.4 54 59.3
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 1.4e-06 57.4 71 49.3
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 1.4e-06 57.4 55 58.2
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 1.4e-06 57.4 52 57.7
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 1.9e-06 57.0 55 56.4
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 1.9e-06 57.0 52 59.6
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 1.9e-06 57.0 55 56.4
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.9e-06 57.0 55 56.4
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.9e-06 57.0 55 56.4
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 1.9e-06 57.0 55 54.5
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 1.9e-06 57.0 54 55.6
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 2.4e-06 56.6 54 57.4
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 2.4e-06 56.6 55 56.4
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 2.4e-06 56.6 52 59.6
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 2.4e-06 56.6 52 59.6
Oeu028917.1 Olea europaea HOM05D004087 ORTHO05D004787 3.2e-06 56.2 52 57.7
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 4.1e-06 55.8 54 57.4
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 4.1e-06 55.8 55 56.4
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 4.1e-06 55.8 55 56.4
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 4.1e-06 55.8 52 57.7
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 4.1e-06 55.8 52 55.8
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 4.1e-06 55.8 55 56.4
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 4.1e-06 55.8 55 54.5
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 4.1e-06 55.8 54 59.3
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 5.4e-06 55.5 54 57.4
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 5.4e-06 55.5 50 60.0
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 5.4e-06 55.5 52 57.7
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 5.4e-06 55.5 54 53.7
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 5.4e-06 55.5 54 53.7
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 5.4e-06 55.5 52 57.7
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 7.0e-06 55.1 52 57.7
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 9.2e-06 54.7 52 55.8
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 9.2e-06 54.7 52 53.8
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 9.2e-06 54.7 66 53.0
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 9.2e-06 54.7 59 50.8
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 9.2e-06 54.7 59 50.8


User provided reference genes

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