Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 2.1e-258 895.2 451 100.0
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 2.1e-234 815.5 459 89.8
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 3.9e-233 811.2 455 89.2
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 2.1e-226 788.9 451 87.6
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 2.7e-226 788.5 451 86.5
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 3.0e-225 785.0 433 90.5
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 4.8e-223 777.7 449 86.9
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 4.8e-223 777.7 451 86.3
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 1.4e-222 776.2 451 86.7
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.8e-222 775.8 456 86.0
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 1.8e-222 775.8 456 86.0
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 2.4e-222 775.4 451 85.8
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 2.4e-222 775.4 456 86.0
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 5.3e-222 774.2 460 85.9
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 5.3e-222 774.2 451 84.7
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 9.1e-222 773.5 453 85.4
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 2.6e-221 771.9 451 85.8
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 7.7e-221 770.4 425 90.8
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 1.7e-220 769.2 447 84.8
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 2.2e-220 768.8 450 85.8
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 2.9e-220 768.5 449 85.7
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 2.9e-220 768.5 451 85.4
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 6.5e-220 767.3 450 85.8
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 8.5e-220 766.9 451 85.4
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 1.5e-219 766.1 425 89.9
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 1.5e-219 766.1 449 84.9
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 2.5e-219 765.4 430 88.1
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 2.1e-218 762.3 455 84.0
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 2.7e-218 761.9 451 84.0
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 2.7e-218 761.9 451 84.3
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 3.6e-218 761.5 451 84.0
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 1.0e-217 760.0 449 84.6
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 1.4e-217 759.6 451 84.0
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.4e-217 759.6 450 84.2
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 1.8e-217 759.2 448 84.8
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 1.5e-216 756.1 445 85.4
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 2.0e-216 755.7 449 83.7
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 2.6e-216 755.4 454 83.9
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 3.3e-216 755.0 449 83.5
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 1.3e-215 753.1 424 87.3
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 2.8e-215 751.9 453 82.6
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 4.8e-215 751.1 449 84.4
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 6.3e-215 750.7 449 83.7
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 8.2e-215 750.4 450 82.7
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 8.2e-215 750.4 449 84.2
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 1.1e-214 750.0 453 82.3
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 3.1e-214 748.4 449 84.2
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 4.1e-214 748.0 450 82.0
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 5.3e-214 747.7 450 82.0
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 9.1e-214 746.9 429 85.3
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 4.5e-213 744.6 449 84.0
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 5.9e-213 744.2 420 87.1
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 1.0e-212 743.4 463 80.3
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 1.7e-212 742.7 454 83.7
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.7e-212 742.7 452 83.0
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.2e-212 742.3 457 82.1
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 5.0e-212 741.1 457 81.8
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 8.5e-212 740.3 447 83.0
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 1.1e-211 740.0 447 82.8
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 1.5e-211 739.6 457 81.8
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 3.2e-211 738.4 447 82.6
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 4.2e-211 738.0 457 81.8
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 5.5e-211 737.6 445 82.7
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 7.2e-211 737.3 448 81.9
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 7.2e-211 737.3 502 75.7
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 1.2e-210 736.5 445 82.7
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.2e-210 736.5 457 81.6
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 2.7e-210 735.3 430 87.0
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 2.7e-210 735.3 430 87.0
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 6.1e-210 734.2 447 82.1
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 6.1e-210 734.2 450 82.2
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 1.4e-209 733.0 420 85.7
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 4.4e-208 728.0 434 84.8
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 4.4e-208 728.0 469 78.7
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 7.5e-208 727.2 518 75.3
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 9.8e-208 726.9 449 81.7
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 9.8e-208 726.9 449 81.7
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 1.3e-207 726.5 449 82.0
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 1.3e-207 726.5 449 82.0
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 2.2e-207 725.7 430 82.8
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 3.7e-207 724.9 449 81.7
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 3.7e-207 724.9 449 81.7
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 3.7e-207 724.9 430 83.5
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 1.8e-206 722.6 429 82.5
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 1.8e-206 722.6 435 83.4
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 4.1e-206 721.5 422 84.4
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 5.4e-206 721.1 414 86.0
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 7.0e-206 720.7 429 82.3
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 9.1e-206 720.3 465 78.9
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 1.6e-205 719.5 460 81.1
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.7e-204 716.1 428 83.2
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 2.9e-204 715.3 430 83.0
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 1.9e-203 712.6 428 82.0
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 4.2e-203 711.4 447 80.5
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 7.2e-203 710.7 419 82.3
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 2.0e-200 702.6 415 82.9
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 2.8e-199 698.7 437 81.5
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 2.8e-199 698.7 417 82.7
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 4.5e-197 691.4 390 87.2
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 3.8e-196 688.3 474 74.5
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 4.4e-192 674.9 384 87.8
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 2.9e-191 672.2 451 77.4
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 3.2e-190 668.7 384 86.7
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 7.8e-189 664.1 441 76.6
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 1.3e-188 663.3 402 84.1
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.1e-187 660.2 444 76.1
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 8.0e-186 654.1 450 75.3
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 2.6e-184 649.0 450 75.1
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 2.4e-182 642.5 430 76.0
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 1.2e-181 640.2 413 78.5
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 4.6e-181 638.3 441 74.4
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 7.3e-179 630.9 450 73.3
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 6.2e-178 627.9 433 73.4
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 1.2e-176 623.6 412 76.2
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 3.7e-175 618.6 409 74.3
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 1.4e-174 616.7 410 75.1
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 7.6e-168 594.3 473 68.1
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 7.6e-168 594.3 409 71.9
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 5.2e-161 571.6 425 71.5
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 3.4e-152 542.3 579 54.9
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 3.7e-146 522.3 327 81.7
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 1.2e-144 517.3 428 59.6
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 3.3e-139 499.2 330 77.9
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 1.4e-129 467.2 410 58.3
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 1.5e-120 437.2 369 60.4
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 3.8e-119 432.6 387 59.4
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 2.6e-112 409.8 275 74.9
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 7.7e-112 408.3 252 81.3
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.0e-108 397.9 412 50.5
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 2.4e-105 386.7 427 51.5
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 2.2e-82 310.5 173 90.2
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 6.6e-79 298.9 188 81.9
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 2.8e-77 293.5 387 42.4
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 2.6e-75 287.0 275 57.1
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 6.2e-61 239.2 358 41.1
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 2.9e-58 230.3 136 77.9
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.5e-46 191.4 387 34.4
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 4.4e-43 179.9 116 78.4
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 7.4e-30 136.0 143 52.4
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 8.1e-29 132.5 81 86.4
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 6.9e-28 129.4 71 87.3
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 2.6e-27 127.5 69 88.4
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 5.7e-22 109.8 67 88.1
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 2.0e-19 101.3 99 57.6
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 4.5e-19 100.1 75 68.0
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 7.9e-16 89.4 59 79.7
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.3e-15 88.6 296 27.0
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 2.3e-15 87.8 61 70.5
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 8.5e-10 69.3 50 68.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 3.0e-07 60.8 74 45.9
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 3.0e-07 60.8 74 45.9
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 1.1e-06 58.9 36 72.2
AUR62002710 Chenopodium quinoa HOM05D004870 ORTHO05D138226 2.0e-06 58.2 30 90.0


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