Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 0.0e+00 1300.8 677 100.0
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.2e-238 830.1 721 66.3
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 2.2e-227 792.7 723 63.8
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 4.1e-226 788.5 723 63.3
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 4.3e-215 751.9 699 61.2
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 1.7e-211 740.0 683 63.0
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 1.4e-210 736.9 682 61.3
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 1.3e-208 730.3 692 60.3
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 6.6e-208 728.0 715 59.2
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.9e-207 726.5 680 60.3
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 3.3e-207 725.7 682 61.3
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 2.1e-206 723.0 689 59.5
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.6e-206 722.2 683 60.3
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 3.6e-206 722.2 683 62.4
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 8.0e-206 721.1 697 59.4
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 3.1e-205 719.2 712 61.1
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 4.4e-204 715.3 681 59.6
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 9.8e-204 714.1 698 60.2
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 4.9e-203 711.8 684 59.6
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 4.1e-202 708.8 683 59.9
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 4.1e-202 708.8 710 58.0
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 5.4e-202 708.4 687 60.0
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 1.2e-201 707.2 684 58.9
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 4.6e-201 705.3 701 59.6
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 8.6e-200 701.0 690 59.0
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 1.1e-199 700.7 705 58.0
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 1.1e-199 700.7 703 58.0
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.5e-199 700.3 696 58.9
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 9.5e-199 697.6 722 57.6
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 1.2e-198 697.2 731 56.9
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 6.2e-198 694.9 682 59.5
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 6.2e-198 694.9 722 57.1
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 3.4e-196 689.1 709 57.8
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.2e-194 682.6 711 57.1
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 8.6e-192 674.5 622 60.6
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.1e-191 674.1 693 57.9
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 2.8e-190 669.5 720 55.7
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 8.1e-190 667.9 655 59.1
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 5.8e-188 661.8 712 55.3
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 4.9e-187 658.7 495 70.3
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 7.1e-186 654.8 687 56.6
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 1.2e-185 654.1 721 54.9
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 1.7e-184 650.2 676 56.8
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 2.3e-184 649.8 702 55.7
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 2.3e-184 649.8 681 56.1
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 3.0e-184 649.4 625 58.7
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 3.9e-184 649.0 683 55.9
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 6.6e-184 648.3 689 55.3
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.1e-183 647.5 659 58.3
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 7.3e-183 644.8 706 55.2
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-182 643.7 701 55.2
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 2.8e-182 642.9 693 56.4
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 2.0e-180 636.7 696 56.0
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 7.6e-180 634.8 714 55.0
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 1.7e-179 633.6 690 53.5
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 1.4e-178 630.6 702 54.0
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 5.4e-178 628.6 690 53.3
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 1.2e-177 627.5 693 53.2
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 2.3e-176 623.2 695 56.0
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 3.3e-175 619.4 694 53.7
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 7.3e-175 618.2 705 52.3
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 9.6e-175 617.8 686 54.7
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.1e-173 614.4 466 68.7
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 1.4e-173 614.0 690 52.8
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 2.0e-172 610.1 704 51.7
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 1.1e-170 604.4 459 69.3
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 1.9e-170 603.6 692 52.0
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 1.3e-168 597.4 628 57.6
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 1.3e-166 590.9 730 49.5
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 1.8e-165 587.0 729 51.6
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 1.8e-165 587.0 648 56.2
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 1.5e-164 583.9 652 53.5
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 2.6e-164 583.2 679 52.6
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 7.6e-164 581.6 677 52.9
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.3e-163 580.9 629 56.1
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 4.9e-163 578.9 667 51.9
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 1.1e-162 577.8 477 64.2
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 1.4e-162 577.4 702 50.3
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 7.4e-159 565.1 689 50.1
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 8.2e-158 561.6 629 54.8
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 1.5e-156 557.4 703 47.8
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 1.0e-152 544.7 592 53.4
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 1.5e-151 540.8 512 56.4
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 8.2e-150 535.0 711 48.5
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 4.6e-145 519.2 656 48.9
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 4.6e-145 519.2 677 47.4
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 6.9e-141 505.4 620 49.8
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 8.5e-139 498.4 688 45.6
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 1.6e-137 494.2 685 45.4
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 3.9e-136 489.6 427 61.4
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 2.4e-133 480.3 648 46.8
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 1.2e-132 478.0 687 46.0
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 2.1e-129 467.2 449 57.2
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 3.3e-127 459.9 501 53.5
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 1.1e-125 454.9 635 45.7
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 1.2e-119 434.9 495 49.5
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 3.3e-119 433.3 469 53.3
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 7.5e-119 432.2 534 50.7
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 4.8e-118 429.5 823 37.5
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 5.2e-112 409.5 643 41.2
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 2.2e-110 404.1 349 62.8
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 9.1e-109 398.7 575 42.1
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 1.3e-107 394.8 644 41.0
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 1.0e-104 385.2 418 52.6
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 2.6e-103 380.6 488 50.2
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.7e-100 370.5 635 41.1
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 5.0e-99 366.3 610 43.1
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 3.3e-98 363.6 344 58.7
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 2.6e-87 327.4 475 45.1
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 6.4e-86 322.8 192 82.3
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 3.3e-82 310.5 464 45.3
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 4.7e-81 306.6 404 45.5
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 1.8e-80 304.7 468 43.6
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 2.3e-80 304.3 464 44.6
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 3.2e-77 293.9 692 34.2
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 2.7e-76 290.8 168 83.9
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 6.6e-75 286.2 496 37.5
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 5.2e-72 276.6 465 41.9
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 2.6e-71 274.2 161 81.4
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 7.1e-69 266.2 336 51.2
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 4.6e-68 263.5 160 78.1
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 5.1e-67 260.0 173 73.4
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 1.6e-65 255.0 161 75.8
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 2.4e-64 251.1 189 69.3
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.2e-63 248.8 624 35.7
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 4.0e-56 223.8 123 85.4
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 5.1e-51 206.8 124 79.0
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.5e-50 205.3 340 43.5
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 2.5e-50 204.5 226 47.8
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-45 188.7 187 57.8
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 6.2e-41 173.3 124 68.5
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 4.0e-40 170.6 158 61.4
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 7.6e-39 166.4 190 52.6
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 4.9e-38 163.7 297 40.7
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 1.3e-35 155.6 137 59.1
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 1.1e-34 152.5 450 27.8
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 6.3e-33 146.7 453 29.6
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.1e-32 146.0 115 67.0
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 1.4e-32 145.6 264 42.0
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 2.4e-32 144.8 239 38.1
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 2.4e-32 144.8 239 38.1
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 2.6e-31 141.4 86 82.6
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.4e-29 135.6 194 47.4
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 6.7e-27 126.7 68 85.3
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 4.8e-25 120.6 508 24.0
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 1.1e-24 119.4 91 68.1
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 1.9e-21 108.6 68 70.6
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 7.9e-20 103.2 88 65.9
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-19 102.4 102 53.9
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-19 102.4 102 53.9
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-19 102.4 102 53.9
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-19 102.4 102 53.9
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 1.1e-18 99.4 82 67.1
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 1.5e-18 99.0 94 57.4
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.3e-17 95.9 96 53.1
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 3.1e-16 91.3 54 79.6
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 1.0e-14 86.3 171 38.6
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 3.8e-14 84.3 137 35.8
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.1e-13 82.8 91 48.4
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 1.5e-13 82.4 64 62.5
CSS0003774 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 1.2e-12 79.3 219 38.8
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.6e-12 79.0 342 27.5
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.0e-11 76.3 47 87.2
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-11 74.3 246 34.1
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 6.7e-11 73.6 50 78.0
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 1.5e-10 72.4 49 77.6
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.3e-09 69.3 79 46.8
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 1.3e-09 69.3 46 56.5
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 1.3e-09 69.3 46 56.5
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 3.7e-09 67.8 128 34.4
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 3.7e-09 67.8 46 54.3
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 4.8e-09 67.4 40 80.0
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 9.1e-08 63.2 39 76.9
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 9.1e-08 63.2 39 74.4
CAN.G17.4 Capsicum annuum HOM05D003836 ORTHO05D004556 3.5e-07 61.2 228 29.8
arahy.Tifrunner.gnm1.ann1.35E9MG Arachis hypogaea HOM05D003836 ORTHO05D004556 8.5e-06 56.6 48 60.4


User provided reference genes

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