Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p024609 Quercus lobata HOM05D009728 ORTHO05D011965 7.0e-102 374.0 196 100.0
QL03p024758 Quercus lobata HOM05D009728 ORTHO05D011965 3.4e-96 355.1 212 90.6
Manes.08G128200 Manihot esculenta HOM05D009728 ORTHO05D011965 2.8e-42 176.0 197 52.3
Manes.09G155500 Manihot esculenta HOM05D009728 ORTHO05D011965 1.7e-39 166.8 201 50.7
TWI12G0190 Tripterygium wilfordii HOM05D009728 ORTHO05D011965 4.9e-39 165.2 207 52.2
Eucgr.L02102 Eucalyptus grandis HOM05D009728 ORTHO05D011965 2.4e-38 162.9 183 53.0
Gohir.D08G231300 Gossypium hirsutum HOM05D009728 ORTHO05D011965 3.0e-36 156.0 202 46.5
Gorai.004G245700 Gossypium raimondii HOM05D009728 ORTHO05D011965 3.9e-36 155.6 202 46.5
Ciclev10002536m.g Citrus clementina HOM05D009728 ORTHO05D011965 2.5e-35 152.9 209 49.3
GSVIVG01021841001 Vitis vinifera HOM05D009728 ORTHO05D011965 3.7e-34 149.1 145 60.7
Gohir.A08G214300 Gossypium hirsutum HOM05D009728 ORTHO05D011965 4.8e-34 148.7 202 44.6
Sabra13G0035900 Salix brachista HOM05D009728 ORTHO05D011965 1.4e-33 147.1 199 49.7
Duzib106G1249 Durio zibethinus HOM05D009728 ORTHO05D011965 1.8e-33 146.7 205 47.3
PGR004G2732 Punica granatum HOM05D009728 ORTHO05D011965 2.4e-33 146.4 205 48.3
Prupe.6G340300 Prunus persica HOM05D009728 ORTHO05D011965 1.9e-30 136.7 116 64.7
Potri.013G037900 Populus trichocarpa HOM05D009728 ORTHO05D011965 7.9e-29 131.3 152 53.3
TAR362G0291 Trochodendron aralioides HOM05D009728 ORTHO05D011965 1.3e-28 130.6 129 56.6
COL.COLO4_15288 Corchorus olitorius HOM05D009728 ORTHO05D011965 6.7e-28 128.3 213 42.3
arahy.Tifrunner.gnm1.ann1.UKXE3V Arachis hypogaea HOM05D009728 ORTHO05D011965 1.6e-26 123.6 193 44.6
arahy.Tifrunner.gnm1.ann1.06AVZ6 Arachis hypogaea HOM05D009728 ORTHO05D011965 6.2e-26 121.7 188 45.2
Thecc.05G288100 Theobroma cacao HOM05D009728 ORTHO05D011965 1.2e-24 117.5 157 45.9
Nn1g02325 Nelumbo nucifera HOM05D009728 ORTHO05D011965 5.7e-19 98.6 104 50.0
Dinv11539 Davidia involucrata HOM05D009728 ORTHO05D011965 1.2e-16 90.9 71 64.8
Potri.005G050800 Populus trichocarpa HOM05D009728 ORTHO05D011965 9.4e-14 81.3 74 58.1
Mapoly0004s0228 Marchantia polymorpha HOM05D002614 ORTHO05D002794 7.4e-11 71.6 119 37.0
TAR362G0346 Trochodendron aralioides HOM05D009728 ORTHO05D414740 4.8e-10 68.9 116 42.2
EL10Ac4g07676 Beta vulgaris HOM05D002614 ORTHO05D002794 9.1e-09 64.7 105 35.2
Cpa.g.sc117.68 Carica papaya HOM05D009728 ORTHO05D011965 9.1e-09 64.7 115 46.1
Carub.0002s2647 Capsella rubella HOM05D002614 ORTHO05D002794 1.3e-07 60.8 102 34.3
CBR_g90925 Chara braunii HOM05D002614 ORTHO05D002794 1.3e-07 60.8 147 31.3
Pp3c11_4820 Physcomitrium patens HOM05D002614 ORTHO05D002794 1.3e-07 60.8 147 34.7
Peaxi162Scf00235g00833 Petunia axillaris HOM05D002614 ORTHO05D002794 2.9e-07 59.7 143 32.2
Ah.06g182130 Amaranthus hybridus HOM05D002614 ORTHO05D002794 5.0e-07 58.9 105 35.2
Nitab4.5_0003869g0080 Nicotiana tabacum HOM05D002614 ORTHO05D002794 1.1e-06 57.8 143 30.8
Nitab4.5_0005965g0010 Nicotiana tabacum HOM05D002614 ORTHO05D002794 1.1e-06 57.8 122 31.1
AUR62015900 Chenopodium quinoa HOM05D002614 ORTHO05D002794 1.4e-06 57.4 148 30.4
SGA_v2.0_scaffold97G29136 Striga asiatica HOM05D002614 ORTHO05D002794 2.5e-06 56.6 102 31.4
SGA_v2.0_scaffold97G29138 Striga asiatica HOM05D002614 ORTHO05D002794 2.5e-06 56.6 102 31.4
vmacro22995 Vaccinium macrocarpon HOM05D002614 ORTHO05D002794 2.5e-06 56.6 102 32.4
MSTRG.6965 Avicennia marina HOM05D002614 ORTHO05D002794 3.2e-06 56.2 94 31.9
CARHR073320 Cardamine hirsuta HOM05D002614 ORTHO05D002794 3.2e-06 56.2 102 32.4
AUR62020322 Chenopodium quinoa HOM05D002614 ORTHO05D002794 3.2e-06 56.2 148 29.7
AL2G40260 Arabidopsis lyrata HOM05D002614 ORTHO05D002794 4.2e-06 55.8 102 32.4
CAN.G337.49 Capsicum annuum HOM05D002614 ORTHO05D002794 4.2e-06 55.8 124 31.5
Thhalv10019084m.g Eutrema salsugineum HOM05D002614 ORTHO05D002794 4.2e-06 55.8 102 32.4
Nitab4.5_0001160g0040 Nicotiana tabacum HOM05D002614 ORTHO05D002794 4.2e-06 55.8 143 30.1
CSS0025854 Camellia sinensis var. sinensis HOM05D002614 ORTHO05D002794 5.5e-06 55.5 145 29.0
TPR.G30646 Trifolium pratense HOM05D002614 ORTHO05D002794 7.2e-06 55.1 94 33.0
Cpa.g.sc117.69 Carica papaya HOM05D009728 ORTHO05D011965 9.4e-06 54.7 55 50.9
SGA_v2.0_scaffold8G04387 Striga asiatica HOM05D002614 ORTHO05D002794 9.4e-06 54.7 102 31.4


User provided reference genes

Program Settings