Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p102610 Quercus lobata HOM05D008417 ORTHO05D010741 2.8e-154 548.5 266 100.0
QL03p072831 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-20 104.0 266 27.8
QL03p059859 Quercus lobata HOM05D000003 ORTHO05D010741 5.3e-20 102.4 271 27.7
QL02p095363 Quercus lobata HOM05D008417 ORTHO05D010741 7.7e-19 98.6 270 26.3
QL06p036222 Quercus lobata HOM05D008417 ORTHO05D010741 1.7e-18 97.4 270 25.9
QL02p078700 Quercus lobata HOM05D008417 ORTHO05D010741 3.8e-18 96.3 259 25.9
QL04p070512 Quercus lobata HOM05D008417 ORTHO05D010741 1.5e-14 84.3 205 31.2
QL04p041207 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-14 83.2 137 32.8
Lj5g0002145 Lotus japonicus HOM05D000003 ORTHO05D000167 4.4e-14 82.8 159 28.3
QL05p050385 Quercus lobata HOM05D008417 ORTHO05D010741 4.4e-14 82.8 209 27.8
QL06p036576 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-13 78.6 268 24.6
QL03p019159 Quercus lobata HOM05D008417 ORTHO05D010741 1.4e-12 77.8 92 40.2
QL03p049951 Quercus lobata HOM05D008417 ORTHO05D010741 3.1e-12 76.6 162 25.3
QL11p016914 Quercus lobata HOM05D008417 ORTHO05D010741 1.6e-11 74.3 259 24.3
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 3.5e-11 73.2 259 26.6
QL07p016748 Quercus lobata HOM05D000003 ORTHO05D010741 3.5e-11 73.2 204 25.0
PSO782G4857 Papaver somniferum HOM05D000003 ORTHO05D001026 5.0e-10 69.3 100 29.0
QL04p019975 Quercus lobata HOM05D008417 ORTHO05D010741 8.5e-10 68.6 221 24.4
PSO339G4796 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-09 68.2 151 27.8
PSO837G0074 Papaver somniferum HOM05D000003 ORTHO05D001026 1.1e-09 68.2 116 31.0
Lj1g0027700 Lotus japonicus HOM05D000003 ORTHO05D025264 1.5e-09 67.8 92 30.4
PSO063G7282 Papaver somniferum HOM05D000003 ORTHO05D001026 1.5e-09 67.8 142 28.9
QL02p033589 Quercus lobata HOM05D000003 ORTHO05D010741 1.9e-09 67.4 80 36.2
TAR346G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.9e-09 67.4 263 21.7
CANSAT25G2194 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-09 66.6 247 24.7
PSO675G8709 Papaver somniferum HOM05D000003 ORTHO05D000004 5.5e-09 65.9 98 32.7
Lj1g0000509 Lotus japonicus HOM05D000003 ORTHO05D000004 7.2e-09 65.5 135 28.1
PSO478G2166 Papaver somniferum HOM05D000003 ORTHO05D000004 9.4e-09 65.1 100 36.0
CANSAT54G1060 Cannabis sativa HOM05D000003 ORTHO05D011885 1.2e-08 64.7 93 34.4
COL.COLO4_22747 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.2e-08 64.7 92 28.3
PSO170G6243 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-08 64.7 96 37.5
Phvul.002G171400 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.2e-08 64.7 88 35.2
Glyma.08G301200 Glycine max HOM05D000005 ORTHO05D000012 1.6e-08 64.3 88 35.2
PSO675G0956 Papaver somniferum HOM05D003407 ORTHO05D001026 1.6e-08 64.3 100 28.0
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-08 63.9 97 38.1
FvH4_2g05763 Fragaria vesca HOM05D000003 ORTHO05D000004 2.7e-08 63.5 86 36.0
PSO782G0080 Papaver somniferum HOM05D003407 ORTHO05D001026 2.7e-08 63.5 178 26.4
BolC4t23405H Brassica oleracea HOM05D001239 ORTHO05D000925 3.6e-08 63.2 243 24.7
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 3.6e-08 63.2 110 35.5
CANSAT56G3310 Cannabis sativa HOM05D000003 ORTHO05D000004 4.7e-08 62.8 245 24.1
Aqoxy3G02214 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.0e-08 62.0 113 29.2
BcaC03g13498 Brassica carinata HOM05D001239 ORTHO05D000925 8.0e-08 62.0 207 23.7
PSO339G1863 Papaver somniferum HOM05D009877 ORTHO05D001026 8.0e-08 62.0 104 35.6
TAR351G0004 Trochodendron aralioides HOM05D000003 ORTHO05D009135 8.0e-08 62.0 242 24.0
CANSAT80G0216 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-07 61.6 224 26.3
FvH4_4g05481 Fragaria vesca HOM05D008133 ORTHO05D009449 1.0e-07 61.6 87 33.3
PSO425G0063 Papaver somniferum HOM05D000003 ORTHO05D001026 1.0e-07 61.6 84 33.3
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 1.0e-07 61.6 213 26.3
CANSAT21G1868 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-07 61.2 91 38.5
Lj1g0015020 Lotus japonicus HOM05D000003 ORTHO05D001406 1.4e-07 61.2 101 27.7
Nn2g11814 Nelumbo nucifera HOM05D000003 ORTHO05D046789 1.4e-07 61.2 106 31.1
PSO063G3219 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-07 61.2 100 38.0
Aqoxy1G02620 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-07 60.8 125 28.0
Aqoxy2G00807 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 1.8e-07 60.8 125 28.0
COL.COLO4_10073 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.8e-07 60.8 138 29.7
QL04p013586 Quercus lobata HOM05D008417 ORTHO05D010741 1.8e-07 60.8 266 24.4
RcHm_v2.0_Chr7g0210911 Rosa chinensis HOM05D000003 ORTHO05D000004 1.8e-07 60.8 92 33.7
TPR.G26335 Trifolium pratense HOM05D000007 ORTHO05D048973 1.8e-07 60.8 98 32.7
Atru.chr4.575 Acer truncatum HOM05D000003 ORTHO05D000651 2.3e-07 60.5 97 34.0
Atru.chr4.578 Acer truncatum HOM05D000003 ORTHO05D000651 2.3e-07 60.5 97 34.0
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 2.3e-07 60.5 101 32.7
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-07 60.1 101 33.7
BcaC02g10519 Brassica carinata HOM05D001239 ORTHO05D000925 3.0e-07 60.1 196 25.0
CANSAT78G2359 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-07 60.1 100 25.0
PSO081G0047 Papaver somniferum HOM05D000003 ORTHO05D001026 3.0e-07 60.1 101 25.7
PSO384G4399 Papaver somniferum HOM05D000003 ORTHO05D001026 3.0e-07 60.1 147 32.0
Prupe.1G283700 Prunus persica HOM05D008133 ORTHO05D009449 3.0e-07 60.1 81 30.9
Atru.chr3.1897 Acer truncatum HOM05D000003 ORTHO05D000651 4.0e-07 59.7 97 33.0
ECA233G2306 Erigeron canadensis HOM05D000296 ORTHO05D000175 4.0e-07 59.7 100 35.0
HanXRQChr05g0145581 Helianthus annuus HOM05D059960 ORTHO05D025729 4.0e-07 59.7 89 32.6
Lj3g0003452 Lotus japonicus HOM05D000003 ORTHO05D000004 4.0e-07 59.7 129 29.5
PSO170G4686 Papaver somniferum HOM05D000003 ORTHO05D001026 4.0e-07 59.7 136 32.4
PSO782G4682 Papaver somniferum HOM05D003407 ORTHO05D001026 4.0e-07 59.7 202 23.3
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 5.2e-07 59.3 210 24.8
COL.COLO4_26731 Corchorus olitorius HOM05D015047 ORTHO05D006738 5.2e-07 59.3 95 31.6
Lj1g0000256 Lotus japonicus HOM05D000003 ORTHO05D007254 5.2e-07 59.3 125 25.6
PSO063G0862 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-07 59.3 141 22.0
Aqoxy5G02643 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.7e-07 58.9 107 28.0
CANSAT11G0650 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-07 58.9 80 33.8
CANSAT21G0556 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-07 58.9 240 25.0
Lj4g0023123 Lotus japonicus HOM05D000003 ORTHO05D000004 6.7e-07 58.9 206 21.8
MBI19_g12139_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.7e-07 58.9 95 35.8
VMungo0251G1159 Vigna mungo HOM05D000005 ORTHO05D000012 6.7e-07 58.9 88 31.8
Aa31LG2G13330 Aethionema arabicum HOM05D000003 ORTHO05D001091 8.8e-07 58.5 104 32.7
Aa31LG8G4340 Aethionema arabicum HOM05D000003 ORTHO05D001091 8.8e-07 58.5 104 32.7
COL.COLO4_22232 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.8e-07 58.5 75 32.0
MD07G1135800 Malus domestica HOM05D000003 ORTHO05D000004 8.8e-07 58.5 95 34.7
PSO384G1061 Papaver somniferum HOM05D007919 ORTHO05D006738 8.8e-07 58.5 123 35.0
Atru.chr1.2142 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-06 58.2 97 33.0
Atru.chr2.1816 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-06 58.2 93 33.3
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-06 57.8 151 27.2
PSO675G0166 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 57.8 100 34.0
Atru.chr10.59 Acer truncatum HOM05D000003 ORTHO05D002259 2.0e-06 57.4 107 30.8
Atru.chr12.2056 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-06 57.4 97 32.0
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 57.4 134 24.6
Aa31sc248G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 57.4 134 24.6
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-06 57.4 174 24.1
COL.COLO4_32288 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.0e-06 57.4 100 25.0
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 2.0e-06 57.4 209 21.1
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 2.0e-06 57.4 119 31.9
PSO339G3113 Papaver somniferum HOM05D000003 ORTHO05D001026 2.0e-06 57.4 128 25.8
PSO339G5115 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-06 57.4 92 28.3
TAR133G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.0e-06 57.4 81 34.6
Aa31LG6G7760 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-06 57.0 124 33.9
AT3G25270 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 2.6e-06 57.0 211 23.7
CSS0013596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.6e-06 57.0 92 27.2
Lj1g0000828 Lotus japonicus HOM05D000003 ORTHO05D000167 2.6e-06 57.0 90 28.9
LjContig00155g0012392 Lotus japonicus HOM05D002777 ORTHO05D001516 2.6e-06 57.0 112 28.6
PSO675G1606 Papaver somniferum HOM05D000003 ORTHO05D001026 2.6e-06 57.0 160 29.4
PSO675G2188 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-06 57.0 106 25.5
TAR090G0006 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.6e-06 57.0 82 36.6
TAR211G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.6e-06 57.0 94 31.9
TAR273G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.6e-06 57.0 212 24.1
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 56.6 105 30.5
Aqoxy1G03455 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.3e-06 56.6 87 40.2
Aqoxy3G01419 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.3e-06 56.6 108 29.6
CANSAT80G0278 Cannabis sativa HOM05D000003 ORTHO05D011885 3.3e-06 56.6 225 24.9
PSO478G1036 Papaver somniferum HOM05D003407 ORTHO05D001026 3.3e-06 56.6 105 26.7
Aa31LG10G9800 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-06 56.2 103 31.1
Aa31LG2G21080 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-06 56.2 103 31.1
Aqoxy4G01216 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.4e-06 56.2 119 31.1
Aqoxy5G02498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.4e-06 56.2 106 30.2
BcaC05g28305 Brassica carinata HOM05D000003 ORTHO05D001091 4.4e-06 56.2 119 23.5
CANSAT25G0899 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-06 56.2 96 26.0
CANSAT80G2799 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-06 56.2 97 30.9
COL.COLO4_18924 Corchorus olitorius HOM05D000003 ORTHO05D009449 4.4e-06 56.2 104 25.0
PSO357G0561 Papaver somniferum HOM05D000003 ORTHO05D001026 4.4e-06 56.2 131 25.2
Aa31LG6G3800 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-06 55.8 124 33.1
Aa31sc142G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-06 55.8 124 33.1
BcaB01g00937 Brassica carinata HOM05D000003 ORTHO05D000004 5.7e-06 55.8 133 28.6
BcaNung01203 Brassica carinata HOM05D000003 ORTHO05D000004 5.7e-06 55.8 206 26.2
COL.COLO4_07290 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.7e-06 55.8 92 28.3
RcHm_v2.0_Chr6g0249781 Rosa chinensis HOM05D000003 ORTHO05D000004 5.7e-06 55.8 103 28.2
TPR.G27707 Trifolium pratense HOM05D000003 ORTHO05D000004 5.7e-06 55.8 100 29.0
BcaC03g15774 Brassica carinata HOM05D001239 ORTHO05D000925 7.5e-06 55.5 98 32.7
AUR62031346 Chenopodium quinoa HOM05D007772 ORTHO05D009623 7.5e-06 55.5 72 38.9
PSO478G4157 Papaver somniferum HOM05D000003 ORTHO05D001026 7.5e-06 55.5 94 37.2
PSO541G4818 Papaver somniferum HOM05D000003 ORTHO05D000004 7.5e-06 55.5 156 26.3
QL05p060609 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-06 55.5 64 37.5
RcHm_v2.0_Chr1g0334101 Rosa chinensis HOM05D000005 ORTHO05D000012 7.5e-06 55.5 102 26.5
Aa31LG3G12630 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.7e-06 55.1 281 23.5
CANSAT01G2103 Cannabis sativa HOM05D000003 ORTHO05D011885 9.7e-06 55.1 108 32.4
CANSAT64G0029 Cannabis sativa HOM05D000003 ORTHO05D000167 9.7e-06 55.1 174 24.7
PSO017G1601 Papaver somniferum HOM05D007919 ORTHO05D006738 9.7e-06 55.1 96 31.2
PSO339G4317 Papaver somniferum HOM05D007919 ORTHO05D006738 9.7e-06 55.1 96 28.1
QL10p053620 Quercus lobata HOM05D000477 ORTHO05D000338 9.7e-06 55.1 70 30.0


User provided reference genes

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