Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p097286 Quercus lobata HOM05D000306 ORTHO05D005993 1.3e-78 296.2 143 100.0
QL02p097337 Quercus lobata HOM05D000306 ORTHO05D005993 5.9e-74 280.8 143 95.8
Cfa013519 Carpinus fangiana HOM05D000306 ORTHO05D005993 3.8e-65 251.5 143 86.0
CiPaw.07G190100 Carya illinoinensis HOM05D000306 ORTHO05D005993 3.7e-60 235.0 143 80.4
Duzib150G0339 Durio zibethinus HOM05D000306 ORTHO05D005993 3.6e-55 218.4 143 76.2
Cpa.g.sc95.64 Carica papaya HOM05D000306 ORTHO05D005993 1.4e-54 216.5 142 74.6
GSVIVG01029151001 Vitis vinifera HOM05D000306 ORTHO05D005993 1.8e-54 216.1 142 73.2
Atru.chr7.720 Acer truncatum HOM05D000306 ORTHO05D005993 2.3e-54 215.7 142 74.6
Manes.06G023800 Manihot esculenta HOM05D000306 ORTHO05D005993 5.2e-54 214.5 142 76.1
VMungo1215G0493 Vigna mungo HOM05D000306 ORTHO05D005993 3.3e-53 211.8 143 74.1
Thecc.09G168600 Theobroma cacao HOM05D000306 ORTHO05D005993 7.5e-53 210.7 143 73.4
Prupe.1G089300 Prunus persica HOM05D000306 ORTHO05D005993 9.7e-53 210.3 143 72.7
Lj4g0011507 Lotus japonicus HOM05D000306 ORTHO05D005993 2.8e-52 208.8 143 74.8
Lalb_Chr07g0180301 Lupinus albus HOM05D000306 ORTHO05D005993 3.7e-52 208.4 143 72.7
Glyma.13G094700 Glycine max HOM05D000306 ORTHO05D005993 6.3e-52 207.6 143 72.7
Lj9A687T82 Lonicera japonica HOM05D000306 ORTHO05D005993 8.2e-52 207.2 144 72.9
Actinidia04131 Actinidia chinensis HOM05D000306 ORTHO05D005993 1.1e-51 206.8 142 71.8
Potri.006G170400 Populus trichocarpa HOM05D000306 ORTHO05D005993 1.8e-51 206.1 142 73.2
TWI34G1047 Tripterygium wilfordii HOM05D000306 ORTHO05D005993 9.1e-51 203.8 143 69.9
A03p12730 Brassica napus HOM05D000306 ORTHO05D005993 1.6e-50 203.0 142 71.8
BraA03t10584Z Brassica rapa HOM05D000306 ORTHO05D005993 1.6e-50 203.0 142 71.8
vmacro13109 Vaccinium macrocarpon HOM05D000306 ORTHO05D005993 2.0e-50 202.6 148 70.3
Gohir.D13G216000 Gossypium hirsutum HOM05D000306 ORTHO05D005993 2.7e-50 202.2 144 71.5
Phvul.003G147900 Phaseolus vulgaris HOM05D000306 ORTHO05D005993 2.7e-50 202.2 143 70.6
CsaV3_1G031330 Cucumis sativus L. HOM05D000306 ORTHO05D005993 3.5e-50 201.8 143 71.3
Gohir.A13G211900 Gossypium hirsutum HOM05D000306 ORTHO05D005993 3.5e-50 201.8 144 71.5
Gorai.013G246300 Gossypium raimondii HOM05D000306 ORTHO05D005993 4.5e-50 201.4 144 71.5
MD13G1267300 Malus domestica HOM05D000306 ORTHO05D005993 4.5e-50 201.4 143 68.5
C03p14920 Brassica napus HOM05D000306 ORTHO05D005993 5.9e-50 201.1 142 71.1
BolC3t13934H Brassica oleracea HOM05D000306 ORTHO05D005993 5.9e-50 201.1 142 71.1
BcaC01g06481 Brassica carinata HOM05D000306 ORTHO05D005993 1.0e-49 200.3 142 71.1
Hma1.2p1_1022F.1_g248760 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.3e-49 199.9 142 69.0
BolC9t57799H Brassica oleracea HOM05D000306 ORTHO05D005993 2.2e-49 199.1 142 69.7
CANSAT11G2131 Cannabis sativa HOM05D000306 ORTHO05D005993 2.2e-49 199.1 143 69.9
MELO3C017490.2 Cucumis melo HOM05D000306 ORTHO05D005993 2.2e-49 199.1 143 70.6
Nn8g40500 Nelumbo nucifera HOM05D000306 ORTHO05D005993 2.9e-49 198.7 142 69.0
Thhalv10012677m.g Eutrema salsugineum HOM05D000306 ORTHO05D005993 3.8e-49 198.4 142 69.7
RcHm_v2.0_Chr4g0403051 Rosa chinensis HOM05D000306 ORTHO05D005993 3.8e-49 198.4 143 69.2
Rhsim01G0006800 Rhododendron simsii HOM05D000306 ORTHO05D005993 6.5e-49 197.6 148 68.9
Sp6g19290 Schrenkiella parvula HOM05D000306 ORTHO05D005993 6.5e-49 197.6 142 70.4
BcaC04g19951 Brassica carinata HOM05D000306 ORTHO05D005993 1.1e-48 196.8 142 69.0
A10p15010 Brassica napus HOM05D000306 ORTHO05D005993 1.1e-48 196.8 142 69.0
BraA10t43578Z Brassica rapa HOM05D000306 ORTHO05D005993 1.1e-48 196.8 142 69.0
BcaB08g36111 Brassica carinata HOM05D000306 ORTHO05D005993 1.5e-48 196.4 142 69.7
PSO782G0277 Papaver somniferum HOM05D000306 ORTHO05D005993 1.9e-48 196.1 142 69.7
C09p49460 Brassica napus HOM05D000306 ORTHO05D005993 2.5e-48 195.7 142 69.0
Dinv41268 Davidia involucrata HOM05D000306 ORTHO05D005993 2.5e-48 195.7 142 68.3
PSO063G2401 Papaver somniferum HOM05D000306 ORTHO05D005993 2.5e-48 195.7 142 69.7
Psat4g011120 Pisum sativum HOM05D000306 ORTHO05D005993 3.2e-48 195.3 143 69.2
AT5G57590 Arabidopsis thaliana HOM05D000306 ORTHO05D005993 4.2e-48 194.9 142 68.3
BcaC05g28220 Brassica carinata HOM05D000306 ORTHO05D005993 4.2e-48 194.9 142 69.0
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 5.5e-48 194.5 142 64.8
FvH4_4g09130 Fragaria vesca HOM05D000306 ORTHO05D005993 5.5e-48 194.5 143 66.4
Eucgr.C00186 Eucalyptus grandis HOM05D000306 ORTHO05D005993 1.2e-47 193.4 143 69.2
Aqoxy7G03117 Aquilegia oxysepala HOM05D000306 ORTHO05D005993 1.6e-47 193.0 142 66.9
Medtr4g128620 Medicago truncatula HOM05D000306 ORTHO05D005993 1.6e-47 193.0 143 68.5
HanXRQChr03g0068921 Helianthus annuus HOM05D000306 ORTHO05D005993 2.1e-47 192.6 142 64.8
TPR.G5323 Trifolium pratense HOM05D000306 ORTHO05D005993 2.1e-47 192.6 143 67.8
Sed0027913 Sechium edule HOM05D000306 ORTHO05D005993 2.7e-47 192.2 143 69.2
TAR625G0692 Trochodendron aralioides HOM05D000306 ORTHO05D005993 2.7e-47 192.2 153 64.1
PGR142G2544 Punica granatum HOM05D000306 ORTHO05D005993 3.6e-47 191.8 143 66.4
AL8G33620 Arabidopsis lyrata HOM05D000306 ORTHO05D005993 8.0e-47 190.7 142 68.3
Ca_21207_v3 Cicer arietinum L. HOM05D000306 ORTHO05D005993 1.0e-46 190.3 143 67.8
Ciclev10007423m.g Citrus clementina HOM05D000306 ORTHO05D005993 1.0e-46 190.3 142 67.6
ClCG06G013170 Citrullus lanatus HOM05D000306 ORTHO05D005993 1.8e-46 189.5 143 68.5
arahy.Tifrunner.gnm1.ann1.MG2J04 Arachis hypogaea HOM05D000306 ORTHO05D005993 2.3e-46 189.1 163 64.4
CAN.G584.9 Capsicum annuum HOM05D000306 ORTHO05D005993 2.3e-46 189.1 142 66.9
Carub.0008s1810 Capsella rubella HOM05D000306 ORTHO05D005993 5.2e-46 188.0 142 66.2
FAN22G2400 Fragaria x ananassa HOM05D000306 ORTHO05D005993 1.5e-45 186.4 151 62.9
FAN17G3079 Fragaria x ananassa HOM05D000306 ORTHO05D005993 2.6e-45 185.7 151 62.3
Sc14g0001190 Simmondsia chinensis HOM05D000306 ORTHO05D005993 4.4e-45 184.9 142 66.2
HPP92_013429 Vanilla planifolia HOM05D000306 ORTHO05D005993 4.4e-45 184.9 142 63.4
ATR0580G146 Amborella trichopoda HOM05D000306 ORTHO05D005993 7.5e-45 184.1 147 66.0
C01p37640 Brassica napus HOM05D000306 ORTHO05D005993 1.3e-44 183.3 161 60.9
C05p43000 Brassica napus HOM05D000306 ORTHO05D005993 1.3e-44 183.3 161 60.9
BolC1t03728H Brassica oleracea HOM05D000306 ORTHO05D005993 1.3e-44 183.3 161 60.9
Lsat_1_v5_gn_7_54301 Lactuca sativa HOM05D000306 ORTHO05D005993 1.7e-44 183.0 142 64.1
Sopen07g002910 Solanum pennellii HOM05D000306 ORTHO05D005993 2.8e-44 182.2 142 65.5
MSTRG.19696 Avicennia marina HOM05D000306 ORTHO05D005993 4.8e-44 181.4 142 62.7
Solyc07g006810.3 Solanum lycopersicum HOM05D000306 ORTHO05D005993 1.1e-43 180.3 142 64.8
Migut.J01457 Erythranthe guttata HOM05D000306 ORTHO05D005993 4.1e-43 178.3 143 60.8
CDE02G3177 Ceratophyllum demersum HOM05D000306 ORTHO05D005993 5.4e-43 177.9 141 63.8
Haze_22119 Corylus avellana HOM05D000306 ORTHO05D005993 5.4e-43 177.9 125 73.6
BcaC08g43477 Brassica carinata HOM05D000306 ORTHO05D005993 5.9e-42 174.5 154 61.0
C06p08630 Brassica napus HOM05D000306 ORTHO05D005993 5.9e-42 174.5 154 61.0
Os08g0245400 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D005993 7.7e-42 174.1 142 64.1
Aa31LG3G13440 Aethionema arabicum HOM05D000306 ORTHO05D005993 2.3e-41 172.6 190 51.6
BraA02t08063Z Brassica rapa HOM05D000306 ORTHO05D005993 2.9e-41 172.2 143 63.6
Zm00001eb412500 Zea mays HOM05D000306 ORTHO05D005993 3.8e-41 171.8 142 62.0
BcaB01g04449 Brassica carinata HOM05D000306 ORTHO05D005993 1.1e-40 170.2 127 66.9
Hund09018 Selenicereus undatus HOM05D000306 ORTHO05D005993 1.1e-40 170.2 142 62.0
Mapoly0061s0099 Marchantia polymorpha HOM05D000306 ORTHO05D005993 9.5e-40 167.2 145 57.9
unitig_749.g14164 Utricularia gibba HOM05D000306 ORTHO05D005993 2.3e-38 162.5 173 51.4
Nitab4.5_0000244g0320 Nicotiana tabacum HOM05D000306 ORTHO05D005993 4.0e-38 161.8 164 52.4
Peaxi162Scf00050g00628 Petunia axillaris HOM05D000306 ORTHO05D005993 4.4e-37 158.3 143 58.7
Cc06_g13480 Coffea canephora HOM05D000306 ORTHO05D005993 2.8e-36 155.6 119 63.0
SMO146G0375 Selaginella moellendorffii HOM05D000306 ORTHO05D005993 2.8e-36 155.6 142 54.2
Pp3c17_24020 Physcomitrium patens HOM05D000306 ORTHO05D005993 4.1e-35 151.8 142 55.6
C09p62180 Brassica napus HOM05D000306 ORTHO05D005993 7.3e-32 141.0 142 54.2
SHI02942 Sapria himalayana HOM05D000306 ORTHO05D005993 6.1e-31 137.9 105 63.8
arahy.Tifrunner.gnm1.ann1.6YA4AW Arachis hypogaea HOM05D000306 ORTHO05D005993 1.8e-30 136.3 143 51.7
CBR_g30689 Chara braunii HOM05D000306 ORTHO05D005993 3.4e-29 132.1 155 47.7
EL10Ac8g18271 Beta vulgaris HOM05D000306 ORTHO05D005993 4.4e-29 131.7 115 58.3
Sabra06G0131200 Salix brachista HOM05D000306 ORTHO05D005993 2.2e-28 129.4 142 50.7
DCAR_009913 Daucus carota HOM05D000306 ORTHO05D005993 4.9e-28 128.3 142 48.6
MBI14_g17347_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D005993 8.3e-28 127.5 142 50.7
MCO16G292 Micromonas commoda HOM05D000306 ORTHO05D005993 6.0e-26 121.3 152 44.7
AUR62040306 Chenopodium quinoa HOM05D000306 ORTHO05D005993 3.9e-25 118.6 142 46.5
AUR62040000 Chenopodium quinoa HOM05D000306 ORTHO05D005993 8.6e-25 117.5 142 46.5
SGA_v2.0_scaffold69G23277 Striga asiatica HOM05D000306 ORTHO05D005993 5.6e-24 114.8 182 39.6
Ah.09g229770 Amaranthus hybridus HOM05D000306 ORTHO05D005993 1.4e-22 110.2 69 75.4
Cfa024735 Carpinus fangiana HOM05D000306 ORTHO05D005993 5.8e-21 104.8 140 42.9
Cre06.g277200 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D005993 3.1e-14 82.4 185 31.4
Hma1.2p1_1423F.1_g282660 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 3.5e-10 68.9 96 41.7
Hma1.2p1_1022F.1_g248750 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.0e-09 67.4 33 90.9
Hma1.2p1_1423F.1_g282650 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.0e-09 67.4 33 90.9


User provided reference genes

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