Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p073821 Quercus lobata HOM05D005949 ORTHO05D006945 1.4e-230 802.7 444 100.0
Haze_14768 Corylus avellana HOM05D005949 ORTHO05D006945 9.0e-190 667.2 450 80.0
Cfa007328 Carpinus fangiana HOM05D005949 ORTHO05D006945 1.7e-188 662.9 439 81.8
CiPaw.03G046600 Carya illinoinensis HOM05D005949 ORTHO05D006945 4.3e-184 648.3 444 83.1
Manes.17G110300 Manihot esculenta HOM05D005949 ORTHO05D006945 1.0e-180 637.1 440 71.8
GSVIVG01032367001 Vitis vinifera HOM05D005949 ORTHO05D006945 3.5e-173 612.1 445 76.4
TAR374G0398 Trochodendron aralioides HOM05D005949 ORTHO05D006945 3.2e-171 605.5 440 68.4
CANSAT64G2213 Cannabis sativa HOM05D005949 ORTHO05D006945 1.4e-169 600.1 443 74.5
MSTRG.15541 Avicennia marina HOM05D005949 ORTHO05D006945 2.8e-167 592.4 443 65.0
Nn2g12389 Nelumbo nucifera HOM05D005949 ORTHO05D006945 8.2e-167 590.9 434 74.0
CSS0029670 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 2.4e-166 589.3 433 66.5
Nitab4.5_0001562g0070 Nicotiana tabacum HOM05D005949 ORTHO05D006945 5.3e-166 588.2 444 64.6
RhsimUnG0006400 Rhododendron simsii HOM05D005949 ORTHO05D006945 1.3e-164 583.6 443 65.0
RhsimUnG0087200 Rhododendron simsii HOM05D005949 ORTHO05D006945 1.3e-164 583.6 443 65.0
CAN.G1235.24 Capsicum annuum HOM05D005949 ORTHO05D006945 2.5e-163 579.3 443 64.6
Nitab4.5_0006683g0100 Nicotiana tabacum HOM05D005949 ORTHO05D006945 2.5e-163 579.3 431 65.0
Ciclev10015245m.g Citrus clementina HOM05D005949 ORTHO05D006945 2.1e-162 576.2 442 65.8
Eucgr.J02262 Eucalyptus grandis HOM05D005949 ORTHO05D006945 6.1e-162 574.7 429 73.7
PGR083G1217 Punica granatum HOM05D005949 ORTHO05D006945 6.3e-159 564.7 444 71.6
Aqoxy5G03678 Aquilegia oxysepala HOM05D005949 ORTHO05D006945 1.4e-158 563.5 446 63.7
Sed0011104 Sechium edule HOM05D005949 ORTHO05D006945 2.4e-158 562.8 439 70.6
Ca_04380_v3 Cicer arietinum L. HOM05D005949 ORTHO05D006945 2.0e-157 559.7 429 72.0
ClCG10G013730 Citrullus lanatus HOM05D005949 ORTHO05D006945 2.2e-156 556.2 441 68.7
Lj7C602T3 Lonicera japonica HOM05D005949 ORTHO05D006945 3.2e-155 552.4 461 60.5
PGSC0003DMG400018653 Solanum tuberosum HOM05D005949 ORTHO05D006945 7.2e-155 551.2 438 62.1
Thecc.04G021200 Theobroma cacao HOM05D005949 ORTHO05D006945 7.2e-155 551.2 445 69.9
TWI12G1469 Tripterygium wilfordii HOM05D005949 ORTHO05D006945 1.6e-154 550.1 438 71.2
Phvul.004G060400 Phaseolus vulgaris HOM05D005949 ORTHO05D006945 2.1e-154 549.7 428 67.5
Sopen01g054070 Solanum pennellii HOM05D005949 ORTHO05D006945 1.0e-153 547.4 438 61.6
Solyc01g112020.3 Solanum lycopersicum HOM05D005949 ORTHO05D006945 5.2e-153 545.0 438 61.4
Duzib264G1167 Durio zibethinus HOM05D005949 ORTHO05D006945 1.5e-152 543.5 441 60.5
COL.COLO4_29188 Corchorus olitorius HOM05D005949 ORTHO05D006945 3.4e-152 542.3 444 64.9
Glyma.05G115200 Glycine max HOM05D005949 ORTHO05D006945 2.8e-151 539.3 437 66.6
Gohir.D10G085800 Gossypium hirsutum HOM05D005949 ORTHO05D006945 2.8e-151 539.3 444 68.2
SGA_v2.0_scaffold47G17523 Striga asiatica HOM05D005949 ORTHO05D006945 2.8e-151 539.3 436 61.0
HanXRQChr15g0486811 Helianthus annuus HOM05D005949 ORTHO05D006945 1.1e-150 537.3 441 59.9
Gohir.A10G101600 Gossypium hirsutum HOM05D005949 ORTHO05D006945 1.8e-150 536.6 445 69.2
Gorai.011G094000 Gossypium raimondii HOM05D005949 ORTHO05D006945 1.8e-150 536.6 445 68.3
MD17G1021300 Malus domestica HOM05D005949 ORTHO05D006945 7.0e-150 534.6 438 70.1
MD09G1021300 Malus domestica HOM05D005949 ORTHO05D006945 4.5e-149 531.9 440 69.3
ATR0199G040 Amborella trichopoda HOM05D005949 ORTHO05D006945 1.7e-148 530.0 417 70.7
Prupe.3G295200 Prunus persica HOM05D005949 ORTHO05D006945 1.7e-148 530.0 443 71.8
TPR.G8694 Trifolium pratense HOM05D005949 ORTHO05D006945 2.3e-148 529.6 438 69.2
Migut.K01417 Erythranthe guttata HOM05D005949 ORTHO05D006945 1.9e-147 526.6 445 64.9
Lsat_1_v5_gn_4_184520 Lactuca sativa HOM05D005949 ORTHO05D006945 1.9e-147 526.6 423 60.5
EL10Ac6g14123 Beta vulgaris HOM05D005949 ORTHO05D006945 2.5e-147 526.2 501 53.9
Glyma.19G052100 Glycine max HOM05D005949 ORTHO05D006945 4.2e-147 525.4 425 67.5
TPR.G16864 Trifolium pratense HOM05D005949 ORTHO05D006945 8.0e-146 521.2 422 68.5
Cc09_g05780 Coffea canephora HOM05D005949 ORTHO05D006945 2.0e-144 516.5 445 68.5
Medtr6g021740 Medicago truncatula HOM05D005949 ORTHO05D006945 2.0e-144 516.5 429 64.6
FAN09G2334 Fragaria x ananassa HOM05D005949 ORTHO05D006945 3.7e-143 512.3 444 58.1
Peaxi162Scf00420g00016 Petunia axillaris HOM05D005949 ORTHO05D006945 1.8e-142 510.0 441 59.2
ECA232G4961 Erigeron canadensis HOM05D005949 ORTHO05D006945 1.7e-140 503.4 436 56.7
arahy.Tifrunner.gnm1.ann1.4A4JE9 Arachis hypogaea HOM05D005949 ORTHO05D006945 2.9e-140 502.7 438 68.0
AUR62043287 Chenopodium quinoa HOM05D005949 ORTHO05D006945 1.1e-139 500.7 409 60.4
THA.LOC104819734 Tarenaya hassleriana HOM05D005949 ORTHO05D006945 3.3e-139 499.2 444 63.3
PSO063G1157 Papaver somniferum HOM05D005949 ORTHO05D006945 1.6e-138 496.9 447 56.6
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 2.1e-138 496.5 429 62.9
Lalb_Chr06g0174481 Lupinus albus HOM05D005949 ORTHO05D006945 3.6e-138 495.7 441 61.9
Lj2g0004695 Lotus japonicus HOM05D005949 ORTHO05D006945 8.0e-138 494.6 433 65.4
PSO754G0010 Papaver somniferum HOM05D005949 ORTHO05D006945 1.4e-137 493.8 447 56.6
arahy.Tifrunner.gnm1.ann1.BK7H4N Arachis hypogaea HOM05D005949 ORTHO05D006945 1.8e-137 493.4 457 65.6
RcHm_v2.0_Chr2g0173461 Rosa chinensis HOM05D005949 ORTHO05D006945 1.9e-134 483.4 443 63.7
Atru.chr6.2442 Acer truncatum HOM05D005949 ORTHO05D006945 3.2e-134 482.6 353 71.1
Ah.02g128260 Amaranthus hybridus HOM05D005949 ORTHO05D006945 3.2e-134 482.6 445 54.8
Potri.001G341400 Populus trichocarpa HOM05D005949 ORTHO05D006945 3.5e-133 479.2 441 65.1
BcaNung00787 Brassica carinata HOM05D005949 ORTHO05D006945 1.1e-131 474.2 437 54.9
CARHR244220 Cardamine hirsuta HOM05D005949 ORTHO05D006945 1.5e-131 473.8 445 59.6
AL7G15220 Arabidopsis lyrata HOM05D005949 ORTHO05D006945 4.3e-131 472.2 444 58.3
FvH4_6g51990 Fragaria vesca HOM05D005949 ORTHO05D006945 1.2e-130 470.7 443 63.0
AT4G35850 Arabidopsis thaliana HOM05D005949 ORTHO05D006945 2.1e-130 469.9 444 58.1
Sabra16G0221400 Salix brachista HOM05D005949 ORTHO05D006945 2.8e-130 469.5 428 65.4
FAN14G1023 Fragaria x ananassa HOM05D005949 ORTHO05D006945 3.6e-130 469.2 435 63.7
Carub.0007s0438 Capsella rubella HOM05D005949 ORTHO05D006945 4.7e-130 468.8 444 58.6
FAN05G2654 Fragaria x ananassa HOM05D005949 ORTHO05D006945 8.0e-130 468.0 442 62.0
Aa31LG6G12800 Aethionema arabicum HOM05D005949 ORTHO05D006945 2.9e-127 459.5 444 58.1
FAN02G3213 Fragaria x ananassa HOM05D005949 ORTHO05D006945 2.9e-127 459.5 442 62.0
MELO3C026595.2 Cucumis melo HOM05D005949 ORTHO05D006945 9.2e-126 454.5 373 68.6
CsaV3_3G042930 Cucumis sativus L. HOM05D000631 ORTHO05D000524 1.2e-125 454.1 389 65.8
Thhalv10025194m.g Eutrema salsugineum HOM05D005949 ORTHO05D006945 2.1e-125 453.4 440 56.4
Sc09g0007150 Simmondsia chinensis HOM05D005949 ORTHO05D006945 7.8e-125 451.4 370 65.1
AUR62028447 Chenopodium quinoa HOM05D005949 ORTHO05D006945 8.6e-124 448.0 351 61.3
BolC1t00304H Brassica oleracea HOM05D005949 ORTHO05D006945 1.9e-123 446.8 440 55.5
C01p03190 Brassica napus HOM05D005949 ORTHO05D006945 3.3e-123 446.0 441 55.6
BraA01t00268Z Brassica rapa HOM05D005949 ORTHO05D006945 1.6e-122 443.7 440 55.0
BcaNung04881 Brassica carinata HOM05D005949 ORTHO05D006945 8.1e-122 441.4 441 56.5
HPP92_016937 Vanilla planifolia HOM05D005949 ORTHO05D006945 1.1e-121 441.0 431 53.6
A01p02870 Brassica napus HOM05D005949 ORTHO05D006945 1.5e-120 437.2 432 54.9
DCAR_021740 Daucus carota HOM05D005949 ORTHO05D006945 2.0e-120 436.8 548 46.2
Os05g0145600 Oryza sativa ssp. japonica HOM05D005949 ORTHO05D006945 1.7e-119 433.7 425 63.3
Zm00001eb354320 Zea mays HOM05D005949 ORTHO05D006945 3.9e-116 422.5 430 60.9
SEGI_30195 Sequoiadendron giganteum HOM05D005949 ORTHO05D006945 9.9e-112 407.9 411 56.9
Thhalv10023015m.g Eutrema salsugineum HOM05D005949 ORTHO05D006945 1.3e-111 407.5 440 56.1
Dinv25719 Davidia involucrata HOM05D005949 ORTHO05D006945 2.7e-109 399.8 327 60.6
Psat5g064960 Pisum sativum HOM05D005949 ORTHO05D006945 1.7e-103 380.6 327 57.5
unitig_88.g27782 Utricularia gibba HOM05D005949 ORTHO05D006945 4.6e-101 372.5 272 67.3
vmacro05885 Vaccinium macrocarpon HOM05D005949 ORTHO05D006945 1.5e-99 367.5 317 59.3
SHI03792 Sapria himalayana HOM05D005949 ORTHO05D006945 1.9e-94 350.5 241 68.5
CSS0002019 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 3.3e-91 339.7 271 62.0
Actinidia36133 Actinidia chinensis HOM05D005949 ORTHO05D006945 4.3e-91 339.3 314 63.7
CDE04G3569 Ceratophyllum demersum HOM05D005949 ORTHO05D006945 1.5e-88 330.9 330 62.7
Cpa.g.sc130.71 Carica papaya HOM05D005949 ORTHO05D006945 3.7e-82 309.7 266 71.8
Duzib147G0933 Durio zibethinus HOM05D005949 ORTHO05D006945 8.4e-79 298.5 326 48.8
Mapoly0062s0069 Marchantia polymorpha HOM05D005949 ORTHO05D006945 2.2e-66 257.3 408 44.1
Psat1g081720 Pisum sativum HOM05D005949 ORTHO05D006945 4.8e-66 256.1 241 56.0
SMO201G0168 Selaginella moellendorffii HOM05D005949 ORTHO05D006945 1.5e-64 251.1 409 44.3
Pp3c1_21850 Physcomitrium patens HOM05D005949 ORTHO05D006945 3.2e-62 243.4 393 44.5
Pp3c14_7210 Physcomitrium patens HOM05D005949 ORTHO05D006945 6.3e-58 229.2 428 40.2
CSS0020931 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 1.7e-55 221.1 159 66.0
CBR_g20407 Chara braunii HOM05D005949 ORTHO05D006945 9.4e-54 215.3 433 38.8
CBR_g20410 Chara braunii HOM05D005949 ORTHO05D006945 9.4e-54 215.3 425 39.3
AL7G15200 Arabidopsis lyrata HOM05D005949 ORTHO05D006945 6.7e-52 209.1 218 50.0
MBI10_g37260_MAGBIO Magnolia biondii HOM05D005949 ORTHO05D006945 3.7e-50 203.4 212 69.3
AagrBONN_evm.TU.Sc2ySwM_117.2156 Anthoceros agrestis HOM05D005949 ORTHO05D006945 5.9e-48 196.1 404 40.8
Actinidia36134 Actinidia chinensis HOM05D005949 ORTHO05D006945 5.2e-44 183.0 116 75.0
MD09G1021100 Malus domestica HOM05D005949 ORTHO05D006945 4.4e-43 179.9 114 71.1
MBI10_g15883_MAGBIO Magnolia biondii HOM05D005949 ORTHO05D006945 2.8e-42 177.2 206 48.1
SHI03793 Sapria himalayana HOM05D005949 ORTHO05D006945 7.2e-38 162.5 113 68.1
Psat1g081680 Pisum sativum HOM05D005949 ORTHO05D006945 2.0e-35 154.5 100 71.0
Hma1.2p1_0818F.1_g223360 Hydrangea macrophylla HOM05D005949 ORTHO05D006945 4.9e-34 149.8 107 69.2
CAN.G479.6 Capsicum annuum HOM05D005949 ORTHO05D006945 3.1e-33 147.1 216 41.7
Sc07g0004380 Simmondsia chinensis HOM05D005949 ORTHO05D006945 9.1e-33 145.6 132 55.3
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 3.8e-31 140.2 194 44.3
CAN.G370.99 Capsicum annuum HOM05D000140 ORTHO05D000087 5.6e-30 136.3 104 59.6
Zm00001eb120940 Zea mays HOM05D005949 ORTHO05D006945 6.1e-29 132.9 131 53.4
CAN.G1258.5 Capsicum annuum HOM05D005949 ORTHO05D006945 2.4e-25 120.9 80 68.8
Sp7g33630 Schrenkiella parvula HOM05D005949 ORTHO05D006945 2.0e-19 101.3 105 52.4
Sc07g0004370 Simmondsia chinensis HOM05D005949 ORTHO05D006945 7.0e-17 92.8 66 69.7
Cpa.g.sc130.69 Carica papaya HOM05D005949 ORTHO05D006945 9.2e-17 92.4 58 75.9
CDE04G3731 Ceratophyllum demersum HOM05D005949 ORTHO05D006945 3.9e-15 87.0 63 65.1
CAN.G153.13 Capsicum annuum HOM05D001265 ORTHO05D006945 3.4e-11 73.9 55 61.8
CAN.G15.16 Capsicum annuum HOM05D005949 ORTHO05D006945 1.7e-07 61.6 48 58.3
MBI10_g15884_MAGBIO Magnolia biondii HOM05D045841 ORTHO05D006945 6.6e-07 59.7 65 52.3
CAN.G898.5 Capsicum annuum HOM05D005949 ORTHO05D006945 1.5e-06 58.5 182 25.8


User provided reference genes

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