Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 1.9e-274 949.1 719 100.0
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 1.5e-205 720.3 523 79.3
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 1.5e-197 693.7 521 77.4
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 2.0e-194 683.3 523 78.2
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 8.9e-171 604.7 523 60.6
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.4e-155 554.3 535 63.6
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 5.8e-154 548.9 510 66.1
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 5.8e-154 548.9 511 66.1
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 9.3e-152 541.6 522 64.9
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 4.8e-148 529.3 521 64.9
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 2.0e-146 523.9 529 61.6
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 5.8e-146 522.3 526 63.9
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 2.9e-145 520.0 529 61.8
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 4.6e-143 512.7 521 58.9
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 3.0e-142 510.0 452 69.5
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 5.6e-141 505.8 451 57.2
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.3e-140 504.6 526 62.7
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 6.2e-140 502.3 530 62.8
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.1e-139 501.5 523 59.7
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 9.0e-139 498.4 452 67.9
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 5.8e-138 495.7 526 60.6
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 4.9e-137 492.7 531 58.4
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.4e-136 491.1 418 69.1
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.9e-136 490.7 531 58.2
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 3.2e-136 490.0 452 67.0
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 4.2e-136 489.6 527 61.3
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 1.6e-135 487.6 526 59.5
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.1e-135 487.3 520 59.6
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.3e-134 484.6 496 63.3
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 1.8e-134 484.2 514 61.3
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 5.7e-133 479.2 519 60.7
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 7.4e-133 478.8 526 61.6
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 4.8e-132 476.1 525 59.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 8.2e-132 475.3 525 60.4
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 1.4e-131 474.6 525 59.6
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 5.3e-131 472.6 524 59.0
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.2e-130 471.5 538 58.6
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 5.8e-130 469.2 543 57.1
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.4e-129 465.3 535 57.4
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.4e-129 465.3 535 57.4
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 4.6e-127 459.5 450 62.2
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 2.3e-126 457.2 437 67.0
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.9e-126 456.4 359 73.3
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 5.1e-126 456.1 450 62.2
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.1e-125 454.9 521 57.6
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 1.5e-125 454.5 460 62.6
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 3.3e-125 453.4 515 58.1
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 7.4e-125 452.2 557 54.9
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 7.4e-125 452.2 516 55.0
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 9.7e-125 451.8 521 57.0
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 6.3e-124 449.1 538 55.0
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 8.2e-124 448.7 401 66.6
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 4.1e-123 446.4 524 56.1
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 9.0e-123 445.3 515 52.6
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 1.5e-122 444.5 515 56.3
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 1.5e-122 444.5 546 54.8
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 5.9e-122 442.6 524 55.3
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 7.7e-122 442.2 524 56.5
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 2.2e-121 440.7 533 57.8
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.9e-120 437.6 429 65.0
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 4.2e-120 436.4 535 56.1
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 1.2e-119 434.9 472 50.4
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.6e-119 434.5 432 63.0
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.7e-119 433.7 445 61.8
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 4.6e-119 433.0 520 55.4
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.6e-119 433.0 529 54.4
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 6.1e-119 432.6 436 63.5
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 1.8e-118 431.0 522 55.4
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 3.0e-118 430.3 434 62.4
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 3.0e-118 430.3 576 52.1
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 8.8e-118 428.7 387 68.7
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 2.5e-117 427.2 502 56.4
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 9.7e-117 425.2 328 77.7
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 1.7e-116 424.5 518 55.8
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 3.7e-116 423.3 515 50.3
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 8.2e-116 422.2 577 51.3
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 1.4e-115 421.4 438 62.3
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.8e-115 421.0 487 56.9
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 2.0e-114 417.5 378 66.4
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 2.5e-112 410.6 460 58.7
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 3.2e-112 410.2 527 53.7
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 1.6e-111 407.9 350 68.6
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 6.1e-111 406.0 448 50.0
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 8.8e-110 402.1 435 50.8
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 4.8e-108 396.4 328 72.9
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.1e-107 395.2 529 52.0
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.4e-107 394.8 318 73.6
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 4.5e-106 389.8 304 76.0
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 1.7e-105 387.9 446 57.0
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 8.5e-105 385.6 445 57.8
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 1.9e-104 384.4 360 65.8
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 1.9e-104 384.4 360 65.8
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 4.2e-104 383.3 318 71.7
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 3.6e-103 380.2 374 64.2
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 1.4e-102 378.3 341 65.1
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 6.7e-102 375.9 360 65.0
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 1.1e-101 375.2 374 63.6
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 3.7e-100 370.2 354 62.7
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.1e-99 368.6 445 56.4
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.5e-96 357.5 428 56.3
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 5.4e-91 339.7 362 61.0
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 1.5e-72 278.5 361 45.4
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 5.6e-72 276.6 520 37.3
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 7.0e-67 259.6 189 65.6
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 1.8e-62 245.0 284 46.5
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.7e-57 228.4 204 56.4
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 2.6e-37 161.4 395 38.5
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 3.8e-36 157.5 400 35.0
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.5e-29 135.6 384 37.8
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 1.3e-28 132.5 214 56.1
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 2.0e-21 108.6 159 36.5
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 3.7e-15 87.8 130 39.2
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.7e-15 87.8 49 79.6


User provided reference genes

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