Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p073354 Quercus lobata HOM05D006539 ORTHO05D008694 8.8e-66 253.4 125 100.0
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 3.3e-36 155.2 128 71.1
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 3.3e-36 155.2 128 71.1
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 2.9e-29 132.1 128 60.9
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 1.9e-28 129.4 125 62.4
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 1.2e-27 126.7 129 58.9
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 1.6e-27 126.3 127 59.1
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 8.0e-27 124.0 125 58.4
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 4.0e-26 121.7 132 56.8
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 8.9e-26 120.6 127 58.3
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 1.2e-25 120.2 127 59.8
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 1.2e-25 120.2 141 57.4
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.2e-25 120.2 127 58.3
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 2.0e-25 119.4 127 57.5
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 3.4e-25 118.6 129 58.9
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 3.4e-25 118.6 126 59.5
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 5.8e-25 117.9 127 59.1
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 5.8e-25 117.9 151 53.6
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 9.8e-25 117.1 149 53.0
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 1.7e-24 116.3 128 56.2
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 3.7e-24 115.2 128 55.5
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 3.7e-24 115.2 125 58.4
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 3.7e-24 115.2 128 57.8
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 4.9e-24 114.8 149 52.3
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 8.3e-24 114.0 129 55.8
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 8.3e-24 114.0 132 56.8
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 1.1e-23 113.6 148 52.0
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 1.1e-23 113.6 125 56.8
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 1.1e-23 113.6 125 56.0
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 1.1e-23 113.6 125 53.6
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 1.1e-23 113.6 125 56.0
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 1.4e-23 113.2 125 56.0
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 1.9e-23 112.8 132 56.1
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 1.9e-23 112.8 125 56.0
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 2.4e-23 112.5 121 57.9
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 2.4e-23 112.5 125 56.8
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 2.4e-23 112.5 125 56.0
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 3.2e-23 112.1 150 49.3
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 4.1e-23 111.7 129 54.3
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 5.4e-23 111.3 123 56.1
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 5.4e-23 111.3 146 50.0
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 7.0e-23 110.9 125 55.2
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 7.0e-23 110.9 125 56.8
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 7.0e-23 110.9 145 51.7
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 7.0e-23 110.9 140 49.3
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 7.0e-23 110.9 127 52.0
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 9.2e-23 110.5 129 57.4
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 9.2e-23 110.5 151 49.7
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 9.2e-23 110.5 125 55.2
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 9.2e-23 110.5 125 55.2
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 9.2e-23 110.5 131 55.0
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 9.2e-23 110.5 157 47.1
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 1.2e-22 110.2 127 55.1
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 1.6e-22 109.8 129 51.9
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 2.0e-22 109.4 125 54.4
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 2.7e-22 109.0 130 52.3
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 2.7e-22 109.0 107 59.8
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 4.6e-22 108.2 142 51.4
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 6.0e-22 107.8 125 56.0
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 7.8e-22 107.5 126 54.8
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 7.8e-22 107.5 141 53.2
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 1.0e-21 107.1 137 54.7
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 1.3e-21 106.7 125 53.6
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 1.7e-21 106.3 139 51.8
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 1.7e-21 106.3 125 52.8
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 1.7e-21 106.3 126 55.6
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 3.0e-21 105.5 129 50.4
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 3.9e-21 105.1 125 52.0
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 3.9e-21 105.1 121 54.5
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 6.6e-21 104.4 124 53.2
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 6.6e-21 104.4 124 53.2
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 6.6e-21 104.4 135 51.1
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 6.6e-21 104.4 125 52.0
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 8.6e-21 104.0 128 53.9
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 8.6e-21 104.0 125 55.2
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 1.1e-20 103.6 124 51.6
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 1.5e-20 103.2 141 48.9
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 1.9e-20 102.8 145 49.7
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 1.9e-20 102.8 145 49.7
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 2.5e-20 102.4 145 49.7
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 2.5e-20 102.4 126 51.6
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 2.5e-20 102.4 150 46.7
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 7.3e-20 100.9 142 47.9
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 7.3e-20 100.9 130 53.1
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 1.2e-19 100.1 143 48.3
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 1.6e-19 99.8 125 52.0
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 2.8e-19 99.0 129 52.7
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 2.8e-19 99.0 126 51.6
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 6.2e-19 97.8 127 53.5
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.4e-18 96.7 133 47.4
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 1.8e-18 96.3 113 56.6
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 3.1e-18 95.5 99 57.6
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 3.1e-18 95.5 125 52.0
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 3.1e-18 95.5 128 53.1
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 6.8e-18 94.4 135 48.9
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 2.6e-17 92.4 127 52.0
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 7.5e-17 90.9 103 53.4
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.3e-16 90.1 125 48.0
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 2.9e-16 89.0 125 48.0
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 9.2e-15 84.0 117 48.7
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 2.7e-14 82.4 115 46.1
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 6.0e-14 81.3 109 54.1
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 5.1e-13 78.2 105 48.6
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 9.5e-12 73.9 108 46.3
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 1.4e-10 70.1 104 42.3
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 1.7e-08 63.2 83 48.2
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 9.2e-07 57.4 108 41.7
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 6.0e-06 54.7 101 39.6


User provided reference genes

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