Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p072114 Quercus lobata HOM05D001331 ORTHO05D001157 5.4e-184 647.5 323 100.0
QL02p072043 Quercus lobata HOM05D001331 ORTHO05D001157 6.4e-161 570.9 309 92.6
QL93p1844_0084 Quercus lobata HOM05D001331 ORTHO05D001157 3.8e-129 465.3 248 94.8
Haze_14837 Corylus avellana HOM05D001331 ORTHO05D001157 5.0e-89 332.0 302 58.6
CiPaw.03G052700 Carya illinoinensis HOM05D001331 ORTHO05D001157 3.1e-83 312.8 307 59.9
Prupe.3G302600 Prunus persica HOM05D001331 ORTHO05D001157 3.6e-55 219.5 308 45.5
MD17G1015200 Malus domestica HOM05D001331 ORTHO05D001157 4.4e-53 212.6 308 43.5
Potri.017G067400 Populus trichocarpa HOM05D001331 ORTHO05D001157 4.1e-51 206.1 309 41.7
Sabra17G0062300 Salix brachista HOM05D001331 ORTHO05D001157 2.5e-48 196.8 306 41.8
RcHm_v2.0_Chr2g0174831 Rosa chinensis HOM05D001331 ORTHO05D001157 2.1e-42 177.2 306 37.6
MD09G1015100 Malus domestica HOM05D001331 ORTHO05D001157 2.8e-39 166.8 286 41.6
Manes.15G158100 Manihot esculenta HOM05D001331 ORTHO05D001157 1.4e-38 164.5 333 33.0
Ciclev10014314m.g Citrus clementina HOM05D001331 ORTHO05D001157 3.2e-35 153.3 307 37.5
FAN05G4290 Fragaria x ananassa HOM05D001331 ORTHO05D001157 1.1e-32 144.8 306 34.6
RcHm_v2.0_Chr2g0174821 Rosa chinensis HOM05D001331 ORTHO05D001157 2.2e-28 130.6 341 33.7
TWI12G0610 Tripterygium wilfordii HOM05D001331 ORTHO05D001157 1.2e-26 124.8 320 31.2
FAN09G0670 Fragaria x ananassa HOM05D001331 ORTHO05D001157 2.3e-25 120.6 357 29.1
Gorai.009G259300 Gossypium raimondii HOM05D001331 ORTHO05D001157 3.0e-25 120.2 210 41.4
Gohir.A05G246800 Gossypium hirsutum HOM05D001331 ORTHO05D001157 3.9e-25 119.8 210 41.9
Gohir.D05G248300 Gossypium hirsutum HOM05D001331 ORTHO05D001157 2.5e-24 117.1 210 41.0
FvH4_6g53040 Fragaria vesca HOM05D001331 ORTHO05D001157 9.6e-24 115.2 347 32.0
Duzib093G1964 Durio zibethinus HOM05D001331 ORTHO05D001157 1.6e-23 114.4 225 37.3
Sed0009999 Sechium edule HOM05D001331 ORTHO05D001157 6.2e-23 112.5 311 30.9
FvH4_6g53050 Fragaria vesca HOM05D001331 ORTHO05D001157 1.1e-22 111.7 355 28.7
ClCG11G006940 Citrullus lanatus HOM05D001331 ORTHO05D001157 2.4e-22 110.5 287 31.0
Rhsim08G0045100 Rhododendron simsii HOM05D001331 ORTHO05D001157 3.1e-22 110.2 167 42.5
Atru.chr6.2517 Acer truncatum HOM05D001331 ORTHO05D001157 9.0e-22 108.6 253 32.0
TAR622G0469 Trochodendron aralioides HOM05D001331 ORTHO05D001157 1.5e-21 107.8 139 50.4
Thecc.08G160900 Theobroma cacao HOM05D001331 ORTHO05D001157 2.6e-21 107.1 336 34.2
Dinv25676 Davidia involucrata HOM05D001331 ORTHO05D001157 7.6e-21 105.5 261 31.4
CANSAT64G1743 Cannabis sativa HOM05D001331 ORTHO05D001157 4.9e-20 102.8 172 39.0
Actinidia30892 Actinidia chinensis HOM05D001331 ORTHO05D001157 1.9e-19 100.9 164 40.2
COL.COLO4_13736 Corchorus olitorius HOM05D001331 ORTHO05D001157 1.2e-18 98.2 387 28.2
CsaV3_6G001130 Cucumis sativus L. HOM05D001331 ORTHO05D001157 6.0e-18 95.9 314 29.6
GSVIVG01001820001 Vitis vinifera HOM05D001331 ORTHO05D001157 3.0e-17 93.6 162 38.3
CSS0043172 Camellia sinensis var. sinensis HOM05D001331 ORTHO05D001157 3.9e-17 93.2 170 38.8
CSS0001891 Camellia sinensis var. sinensis HOM05D005595 ORTHO05D006962 1.1e-16 91.7 170 38.2
arahy.Tifrunner.gnm1.ann1.ZV22RA Arachis hypogaea HOM05D001331 ORTHO05D001157 1.5e-16 91.3 329 28.6
Nn4g22389 Nelumbo nucifera HOM05D001331 ORTHO05D001157 4.3e-16 89.7 134 42.5
MELO3C008211.2 Cucumis melo HOM05D001331 ORTHO05D001157 4.8e-15 86.3 302 26.8
Dinv33363 Davidia involucrata HOM05D001331 ORTHO05D001157 4.8e-15 86.3 84 51.2
TAR629G1584 Trochodendron aralioides HOM05D001331 ORTHO05D001157 1.8e-14 84.3 138 42.8
Phvul.001G096000 Phaseolus vulgaris HOM05D001331 ORTHO05D001157 2.4e-14 84.0 325 27.4
Hma1.2p1_1219F.1_g267890 Hydrangea macrophylla HOM05D001331 ORTHO05D001157 5.3e-14 82.8 164 34.8
vmacro00334 Vaccinium macrocarpon HOM05D001331 ORTHO05D001157 1.2e-13 81.6 199 33.2
PGR083G0547 Punica granatum HOM05D001331 ORTHO05D001157 2.2e-12 77.4 159 34.6
VMungo1383G0313 Vigna mungo HOM05D001331 ORTHO05D001157 1.4e-11 74.7 317 27.1
Sabra14G0091800 Salix brachista HOM05D002182 ORTHO05D004671 6.1e-10 69.3 109 39.4
Medtr7g031420 Medicago truncatula HOM05D001331 ORTHO05D001157 7.9e-10 68.9 346 26.6
EL10Ac5g12161 Beta vulgaris HOM05D001331 ORTHO05D001157 1.0e-09 68.6 132 35.6
Sabra11G0021400 Salix brachista HOM05D002182 ORTHO05D004671 1.0e-09 68.6 107 40.2
Oeu013649.1 Olea europaea HOM05D001331 ORTHO05D001157 1.8e-09 67.8 97 41.2
Sabra16G0195800 Salix brachista HOM05D002182 ORTHO05D004671 2.3e-09 67.4 105 39.0
Hund14414 Selenicereus undatus HOM05D001331 ORTHO05D001157 3.0e-09 67.0 127 33.9
AT5G40840 Arabidopsis thaliana HOM05D001331 ORTHO05D001157 5.1e-09 66.2 198 28.3
Sp7g01090 Schrenkiella parvula HOM05D001331 ORTHO05D001157 6.7e-09 65.9 181 32.0
Thhalv10027644m.g Eutrema salsugineum HOM05D001331 ORTHO05D001157 3.3e-08 63.5 243 28.0
CAN.G473.78 Capsicum annuum HOM05D001331 ORTHO05D001157 4.3e-08 63.2 171 30.4
MBI11_g38640_MAGBIO Magnolia biondii HOM05D001331 ORTHO05D001157 4.3e-08 63.2 133 37.6
BcaB06g27563 Brassica carinata HOM05D001331 ORTHO05D001157 9.7e-08 62.0 212 27.8
BcaC02g09000 Brassica carinata HOM05D001331 ORTHO05D001157 9.7e-08 62.0 181 30.4
C04p47650 Brassica napus HOM05D001331 ORTHO05D001157 9.7e-08 62.0 181 30.4
Ca_06999_v3 Cicer arietinum L. HOM05D001331 ORTHO05D001157 1.3e-07 61.6 317 24.6
BolC4t26366H Brassica oleracea HOM05D001331 ORTHO05D001157 1.7e-07 61.2 181 30.9
Cpa.g.sc130.6 Carica papaya HOM05D023558 ORTHO05D001157 3.7e-07 60.1 100 37.0
FAN14G3720 Fragaria x ananassa HOM05D001331 ORTHO05D001157 4.8e-07 59.7 225 28.9
Psat3g172880 Pisum sativum HOM05D001331 ORTHO05D001157 1.1e-06 58.5 313 26.8
BraA04t17054Z Brassica rapa HOM05D001331 ORTHO05D001157 1.4e-06 58.2 335 25.7
Cc07_g00590 Coffea canephora HOM05D001331 ORTHO05D001157 1.4e-06 58.2 92 37.0
A04p13890 Brassica napus HOM05D001331 ORTHO05D001157 2.4e-06 57.4 177 28.8
Carub.0007s3466 Capsella rubella HOM05D001331 ORTHO05D001157 4.1e-06 56.6 199 26.6


User provided reference genes

Program Settings