Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 4.1e-72 274.6 138 100.0
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 9.4e-53 210.3 142 76.8
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 1.3e-49 199.9 140 76.4
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.8e-48 196.1 138 70.3
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 5.0e-46 188.0 141 70.2
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 1.1e-45 186.8 139 66.9
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 3.6e-44 181.8 139 69.1
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 3.6e-44 181.8 139 69.1
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 1.5e-42 176.4 138 67.4
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 4.4e-42 174.9 137 67.9
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 8.3e-41 170.6 140 61.4
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 1.4e-40 169.9 141 65.2
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 2.4e-40 169.1 140 60.7
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 7.0e-40 167.5 138 62.3
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 2.0e-39 166.0 143 67.8
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 1.0e-38 163.7 141 65.2
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 1.7e-38 162.9 140 57.1
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 1.7e-38 162.9 138 62.3
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 2.2e-38 162.5 136 64.7
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 2.2e-38 162.5 140 60.7
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 1.2e-36 156.8 140 57.1
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 3.6e-36 155.2 139 57.6
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 8.0e-36 154.1 139 55.4
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 8.0e-36 154.1 143 58.7
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 1.4e-35 153.3 140 53.6
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 1.8e-35 152.9 144 59.0
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 3.0e-35 152.1 142 61.3
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 2.8e-33 145.6 143 58.7
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 5.4e-32 141.4 144 55.6
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 7.0e-32 141.0 144 54.2
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 9.1e-32 140.6 141 60.3
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 2.0e-31 139.4 140 55.0
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 2.7e-31 139.0 140 55.0
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 3.5e-31 138.7 140 55.0
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 4.5e-31 138.3 140 54.3
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 5.9e-31 137.9 138 53.6
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.3e-30 136.7 136 56.6
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 1.3e-30 136.7 141 55.3
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 1.7e-30 136.3 137 53.3
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 2.3e-30 136.0 138 56.5
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 5.0e-30 134.8 142 57.7
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 6.6e-30 134.4 138 50.7
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 6.6e-30 134.4 117 64.1
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 8.6e-30 134.0 138 52.2
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 1.1e-29 133.7 142 54.2
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 1.5e-29 133.3 145 51.7
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 1.5e-29 133.3 140 50.7
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 1.5e-29 133.3 136 55.1
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 1.9e-29 132.9 142 54.9
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 2.5e-29 132.5 142 53.5
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 3.3e-29 132.1 142 52.8
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 5.5e-29 131.3 111 60.4
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 7.2e-29 131.0 143 58.0
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 7.2e-29 131.0 102 58.8
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 7.2e-29 131.0 142 52.8
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 3.6e-28 128.6 142 51.4
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 3.6e-28 128.6 138 55.1
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 3.6e-28 128.6 139 51.8
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 3.6e-28 128.6 141 52.5
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 3.6e-28 128.6 145 50.3
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 4.7e-28 128.3 140 53.6
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 4.7e-28 128.3 142 53.5
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 4.7e-28 128.3 140 53.6
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 4.7e-28 128.3 143 51.7
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 6.1e-28 127.9 145 48.3
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 8.0e-28 127.5 145 49.7
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 8.0e-28 127.5 140 49.3
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.0e-27 127.1 140 50.0
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 1.4e-27 126.7 143 50.3
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 1.8e-27 126.3 143 51.7
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 2.3e-27 125.9 139 51.8
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 2.3e-27 125.9 138 53.6
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 3.0e-27 125.6 134 51.5
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 4.0e-27 125.2 136 47.8
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 5.2e-27 124.8 137 53.3
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 5.2e-27 124.8 141 49.6
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 5.2e-27 124.8 137 53.3
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 6.8e-27 124.4 141 53.9
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 1.2e-26 123.6 164 47.0
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 7.5e-26 120.9 148 49.3
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 1.7e-25 119.8 120 65.8
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 1.7e-25 119.8 113 54.9
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 2.2e-25 119.4 134 50.0
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 2.9e-25 119.0 112 55.4
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 3.7e-25 118.6 141 47.5
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 4.9e-25 118.2 131 49.6
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 8.3e-25 117.5 136 47.8
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 1.1e-24 117.1 120 51.7
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 2.4e-24 115.9 139 46.0
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 2.4e-24 115.9 138 49.3
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 3.2e-24 115.5 71 71.8
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 3.2e-24 115.5 138 45.7
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 9.2e-24 114.0 139 47.5
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 1.2e-23 113.6 149 46.3
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 1.6e-23 113.2 161 45.3
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 2.0e-23 112.8 111 51.4
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 3.5e-23 112.1 77 64.9
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 3.5e-23 112.1 100 55.0
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 4.6e-23 111.7 78 65.4
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 5.9e-23 111.3 95 61.1
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 1.0e-22 110.5 142 48.6
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 3.9e-22 108.6 142 50.0
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 6.6e-22 107.8 140 48.6
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 1.9e-21 106.3 141 48.2
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 4.3e-21 105.1 135 47.4
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 2.1e-20 102.8 78 59.0
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 2.8e-20 102.4 78 59.0
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 8.0e-20 100.9 80 58.8
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 8.9e-19 97.4 87 52.9
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 2.0e-18 96.3 116 54.3
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 7.5e-18 94.4 77 57.1
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 8.3e-17 90.9 100 50.0
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 1.1e-16 90.5 86 52.3
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 1.4e-16 90.1 121 45.5
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 3.2e-16 89.0 73 56.2
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 5.4e-16 88.2 121 44.6
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 7.0e-16 87.8 148 40.5
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 2.7e-15 85.9 68 57.4
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 3.0e-14 82.4 78 53.8
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 4.3e-13 78.6 72 54.2
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 9.5e-13 77.4 105 40.0
BolC2t11399H Brassica oleracea HOM05D006427 ORTHO05D008147 2.8e-12 75.9 108 47.2
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 6.2e-12 74.7 91 39.6
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 1.5e-10 70.1 147 34.7
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 2.0e-10 69.7 81 42.0
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 3.7e-09 65.5 103 41.7
Atru.chr1.3017 Acer truncatum HOM05D006427 ORTHO05D008147 1.6e-07 60.1 89 40.4
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 6.0e-07 58.2 71 39.4


User provided reference genes

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