Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p055459 Quercus lobata HOM05D008226 ORTHO05D010321 3.5e-71 271.6 141 100.0
QL93p0228_0028 Quercus lobata HOM05D008226 ORTHO05D010321 3.5e-71 271.6 141 100.0
QL02p056502 Quercus lobata HOM05D008226 ORTHO05D010321 1.1e-69 266.5 143 98.6
Sopen02g026170 Solanum pennellii HOM05D008226 ORTHO05D010321 8.2e-20 100.9 133 48.9
PGSC0003DMG400017740 Solanum tuberosum HOM05D008226 ORTHO05D010321 1.4e-19 100.1 133 48.9
Solyc02g081540.2 Solanum lycopersicum HOM05D008226 ORTHO05D010321 2.4e-19 99.4 133 48.9
CAN.G809.80 Capsicum annuum HOM05D008226 ORTHO05D010321 1.5e-18 96.7 133 47.4
Nitab4.5_0006392g0020 Nicotiana tabacum HOM05D008226 ORTHO05D010321 3.4e-18 95.5 133 51.1
Nitab4.5_0000108g0030 Nicotiana tabacum HOM05D008226 ORTHO05D010321 5.9e-18 94.7 131 51.1
Lj6g0027436 Lotus japonicus HOM05D008226 ORTHO05D010321 1.6e-15 86.7 145 42.1
Ciclev10013928m.g Citrus clementina HOM05D008226 ORTHO05D010321 3.6e-15 85.5 135 43.7
Carub.0007s3221 Capsella rubella HOM05D008226 ORTHO05D010321 1.4e-14 83.6 135 43.7
ClCG03G014230 Citrullus lanatus HOM05D008226 ORTHO05D010321 3.0e-14 82.4 143 44.8
AT5G36960 Arabidopsis thaliana HOM05D008226 ORTHO05D010321 3.9e-14 82.0 135 44.4
Dinv19504 Davidia involucrata HOM05D008226 ORTHO05D010321 6.7e-14 81.3 135 42.2
Phvul.006G022000 Phaseolus vulgaris HOM05D008226 ORTHO05D010321 6.7e-14 81.3 143 42.0
Glyma.18G047600 Glycine max HOM05D008226 ORTHO05D010321 8.8e-14 80.9 152 42.1
EL10Ac1g01457 Beta vulgaris HOM05D008226 ORTHO05D010321 1.5e-13 80.1 134 44.0
EL10Ac4g08882 Beta vulgaris HOM05D008226 ORTHO05D010321 1.5e-13 80.1 134 44.0
Hund06853 Selenicereus undatus HOM05D008226 ORTHO05D010321 2.0e-13 79.7 139 43.2
Medtr3g063340 Medicago truncatula HOM05D008226 ORTHO05D010321 2.6e-13 79.3 140 40.7
MELO3C015616.2 Cucumis melo HOM05D008226 ORTHO05D010321 3.3e-13 79.0 142 42.3
Psat5g144560 Pisum sativum HOM05D008226 ORTHO05D010321 3.3e-13 79.0 136 41.9
Glyma.11G203200 Glycine max HOM05D008226 ORTHO05D010321 4.4e-13 78.6 152 41.4
Sp7g05530 Schrenkiella parvula HOM05D008226 ORTHO05D010321 4.4e-13 78.6 141 41.8
Lalb_Chr18g0053921 Lupinus albus HOM05D008226 ORTHO05D010321 7.4e-13 77.8 147 40.8
Hma1.2p1_0085F.1_g043950 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 1.3e-12 77.0 140 45.0
Peaxi162Scf00344g00172 Petunia axillaris HOM05D008226 ORTHO05D010321 1.7e-12 76.6 131 42.0
CsaV3_1G042000 Cucumis sativus L. HOM05D008226 ORTHO05D010321 4.8e-12 75.1 142 42.3
PGR119G1943 Punica granatum HOM05D008226 ORTHO05D010321 1.4e-11 73.6 134 42.5
Eucgr.J00616 Eucalyptus grandis HOM05D008226 ORTHO05D010321 5.3e-11 71.6 133 39.1
MBI06_g27514_MAGBIO Magnolia biondii HOM05D008226 ORTHO05D010321 5.3e-11 71.6 134 41.8
Thhalv10027988m.g Eutrema salsugineum HOM05D008226 ORTHO05D010321 7.0e-11 71.2 135 40.0
A04p10380 Brassica napus HOM05D008226 ORTHO05D010321 1.6e-10 70.1 134 41.0
BraA04t16709Z Brassica rapa HOM05D008226 ORTHO05D010321 1.6e-10 70.1 134 41.0
CARHR216130 Cardamine hirsuta HOM05D008226 ORTHO05D010321 1.6e-10 70.1 141 40.4
Cpa.g.sc108.24 Carica papaya HOM05D008226 ORTHO05D010321 1.6e-10 70.1 134 40.3
Hma1.2p1_0085F.1_g043955 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 1.6e-10 70.1 65 64.6
Hma1.2p1_0085F.1_g043980 Hydrangea macrophylla HOM05D008226 ORTHO05D010321 1.6e-10 70.1 65 64.6
BcaC02g09537 Brassica carinata HOM05D008226 ORTHO05D010321 2.6e-10 69.3 137 40.1
VMungo0540G0585 Vigna mungo HOM05D008226 ORTHO05D010321 2.6e-10 69.3 135 42.2
BcaB06g27049 Brassica carinata HOM05D008226 ORTHO05D010321 4.5e-10 68.6 137 40.1
C04p43890 Brassica napus HOM05D008226 ORTHO05D010321 4.5e-10 68.6 137 40.1
BolC4t25969H Brassica oleracea HOM05D008226 ORTHO05D010321 4.5e-10 68.6 137 40.1
vmacro20433 Vaccinium macrocarpon HOM05D008226 ORTHO05D010321 5.9e-10 68.2 135 38.5
Rhsim10G0187600 Rhododendron simsii HOM05D008226 ORTHO05D010321 7.7e-10 67.8 138 37.7
AL7G45590 Arabidopsis lyrata HOM05D008226 ORTHO05D010321 2.2e-09 66.2 134 38.8
TPR.G37332 Trifolium pratense HOM05D008226 ORTHO05D010321 6.5e-09 64.7 144 37.5
arahy.Tifrunner.gnm1.ann1.LH74FI Arachis hypogaea HOM05D008226 ORTHO05D010321 8.5e-09 64.3 147 36.1
TWI34G0961 Tripterygium wilfordii HOM05D008226 ORTHO05D010321 1.5e-08 63.5 133 38.3
PSO063G5747 Papaver somniferum HOM05D033406 ORTHO05D010321 2.5e-08 62.8 143 39.9
PSO782G3837 Papaver somniferum HOM05D033406 ORTHO05D010321 2.5e-08 62.8 143 39.9
Cc07_g12530 Coffea canephora HOM05D008226 ORTHO05D010321 3.2e-08 62.4 137 38.0
THA.LOC104805671 Tarenaya hassleriana HOM05D008226 ORTHO05D010321 3.2e-08 62.4 134 40.3
Aa31LG9G17730 Aethionema arabicum HOM05D008226 ORTHO05D010321 4.2e-08 62.0 135 36.3
Migut.K01185 Erythranthe guttata HOM05D008226 ORTHO05D010321 4.2e-08 62.0 138 40.6
arahy.Tifrunner.gnm1.ann1.H2M7G4 Arachis hypogaea HOM05D008226 ORTHO05D010321 7.2e-08 61.2 153 36.6
Actinidia33003 Actinidia chinensis HOM05D008226 ORTHO05D010321 1.2e-07 60.5 58 63.8
CDE04G1260 Ceratophyllum demersum HOM05D008226 ORTHO05D010321 1.2e-07 60.5 133 39.8
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.6e-07 58.9 135 35.6
THA.LOC104823832 Tarenaya hassleriana HOM05D008226 ORTHO05D010321 4.0e-06 55.5 134 34.3


User provided reference genes

Program Settings