Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.3e-125 453.0 217 100.0
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 5.2e-106 387.9 217 86.2
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 5.2e-98 361.3 217 79.7
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 1.3e-96 356.7 212 82.5
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 5.2e-90 334.7 217 72.4
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 1.5e-89 333.2 217 72.4
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 2.0e-89 332.8 217 74.7
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 3.2e-87 325.5 217 72.4
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 3.2e-87 325.5 217 72.4
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 1.3e-85 320.1 205 75.6
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.5e-84 316.6 217 70.0
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 2.8e-83 312.4 217 69.1
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 3.6e-83 312.0 217 71.0
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 8.0e-83 310.8 217 69.6
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 1.0e-82 310.5 222 70.3
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 3.4e-81 305.4 192 74.0
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 3.4e-81 305.4 217 65.9
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 5.8e-81 304.7 217 68.7
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 9.8e-81 303.9 217 66.8
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 1.7e-80 303.1 217 67.3
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.7e-80 303.1 217 67.3
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 3.7e-80 302.0 217 67.3
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.1e-79 300.4 217 65.9
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 1.4e-79 300.1 215 70.2
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 5.4e-79 298.1 219 63.5
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 9.2e-79 297.4 217 64.5
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 3.5e-78 295.4 217 62.7
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 3.5e-78 295.4 218 64.2
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 6.0e-78 294.7 217 64.1
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 6.0e-78 294.7 217 63.6
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 7.8e-78 294.3 217 64.5
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 1.0e-77 293.9 203 69.5
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 2.3e-77 292.7 217 67.3
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 6.6e-77 291.2 217 65.9
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 6.6e-77 291.2 218 64.2
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 1.5e-76 290.0 218 62.8
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 2.5e-76 289.3 217 65.4
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 2.5e-76 289.3 217 65.4
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 2.5e-76 289.3 218 63.3
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 3.3e-76 288.9 220 64.5
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 3.3e-76 288.9 217 62.2
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 3.3e-76 288.9 218 66.5
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 4.3e-76 288.5 217 63.6
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 7.3e-76 287.7 217 62.7
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 4.7e-75 285.0 217 60.8
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 6.2e-75 284.6 217 63.6
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 1.4e-74 283.5 217 63.6
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.4e-74 283.5 217 65.0
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.4e-74 283.5 219 62.6
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 1.8e-74 283.1 217 63.6
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 3.1e-74 282.3 219 61.6
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.0e-74 282.0 219 62.1
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 5.2e-74 281.6 193 65.8
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 6.8e-74 281.2 222 62.2
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 4.4e-73 278.5 255 58.4
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 9.8e-73 277.3 211 63.5
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.9e-72 275.8 217 60.8
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 2.4e-71 272.7 167 75.4
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 7.1e-71 271.2 224 62.1
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 2.7e-70 269.2 220 60.5
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 3.5e-70 268.9 166 69.3
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.0e-69 267.3 223 58.7
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.1e-68 263.8 216 59.3
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 4.3e-68 261.9 219 59.8
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 5.6e-68 261.5 218 61.9
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 1.6e-67 260.0 217 59.0
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 2.1e-67 259.6 221 58.4
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 3.6e-67 258.8 217 59.9
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 6.2e-67 258.1 217 57.1
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 8.1e-67 257.7 217 58.5
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 8.1e-67 257.7 220 60.0
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.4e-66 256.9 169 68.6
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.5e-65 253.4 217 55.8
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 5.8e-65 251.5 219 58.9
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 3.8e-64 248.8 217 56.7
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 8.4e-64 247.7 219 58.0
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 2.4e-63 246.1 218 57.3
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 7.1e-63 244.6 218 57.8
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 2.7e-62 242.7 218 56.0
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 4.6e-62 241.9 222 55.9
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.3e-61 240.4 218 55.5
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 3.0e-61 239.2 218 56.9
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 5.1e-61 238.4 218 54.6
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 6.6e-61 238.0 218 54.6
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 6.6e-61 238.0 218 54.6
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 3.6e-59 232.3 200 57.5
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 1.1e-58 230.7 219 53.9
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 4.9e-56 221.9 154 66.9
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 6.4e-56 221.5 191 59.2
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 2.4e-55 219.5 217 49.8
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 1.8e-50 203.4 161 59.0
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 9.9e-49 197.6 224 43.3
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 2.9e-48 196.1 157 56.1
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 1.5e-41 173.7 149 52.3
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 9.9e-41 171.0 134 52.2
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 2.9e-40 169.5 149 58.4
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 9.3e-39 164.5 234 39.7
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 1.2e-38 164.1 153 45.1
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.5e-36 157.1 140 58.6
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 4.8e-35 152.1 150 46.7
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 3.8e-32 142.5 137 46.7
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 2.1e-27 126.7 79 72.2
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 2.9e-24 116.3 144 36.8
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 5.1e-21 105.5 51 84.3
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 1.9e-20 103.6 156 38.5
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.2e-16 90.1 54 79.6
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 7.9e-14 81.6 44 81.8
Haze_07210 Corylus avellana HOM05D004747 ORTHO05D164832 6.5e-08 62.0 42 73.8
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 8.5e-08 61.6 74 40.5


User provided reference genes

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