Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p025990 Quercus lobata HOM05D000086 ORTHO05D002912 2.3e-37 158.3 75 100.0
Prupe.8G002900 Prunus persica HOM05D000086 ORTHO05D002912 1.3e-11 72.8 64 57.8
FvH4_2g00300 Fragaria vesca HOM05D000086 ORTHO05D002912 3.7e-11 71.2 72 55.6
FAN24G0014 Fragaria x ananassa HOM05D000086 ORTHO05D002912 3.7e-11 71.2 72 55.6
TWI12G1094 Tripterygium wilfordii HOM05D000086 ORTHO05D002912 4.8e-11 70.9 54 57.4
RcHm_v2.0_Chr6g0249581 Rosa chinensis HOM05D000086 ORTHO05D002912 8.3e-11 70.1 72 55.6
Ciclev10021842m.g Citrus clementina HOM05D000086 ORTHO05D002912 1.1e-10 69.7 64 54.7
FAN20G1107 Fragaria x ananassa HOM05D000086 ORTHO05D002912 1.1e-10 69.7 71 54.9
QL09p001255 Quercus lobata HOM05D000086 ORTHO05D002912 1.1e-10 69.7 61 52.5
FAN19G2136 Fragaria x ananassa HOM05D000086 ORTHO05D002912 1.4e-10 69.3 64 56.2
Dinv37400 Davidia involucrata HOM05D004360 ORTHO05D005195 2.7e-09 65.1 72 47.2
Potri.013G095100 Populus trichocarpa HOM05D000086 ORTHO05D002912 4.5e-09 64.3 64 46.9
GSVIVG01037142001 Vitis vinifera HOM05D000086 ORTHO05D002912 4.5e-09 64.3 69 44.9
Nitab4.5_0007657g0010 Nicotiana tabacum HOM05D000086 ORTHO05D002912 7.7e-09 63.5 75 44.0
Manes.02G200348 Manihot esculenta HOM05D000086 ORTHO05D002912 1.0e-08 63.2 72 41.7
Cc10_g16100 Coffea canephora HOM05D000086 ORTHO05D002912 2.9e-08 61.6 79 40.5
Sabra13G0081100 Salix brachista HOM05D000086 ORTHO05D002912 2.9e-08 61.6 66 43.9
Hma1.2p1_0016F.1_g010970 Hydrangea macrophylla HOM05D000086 ORTHO05D002912 3.8e-08 61.2 75 45.3
Thecc.08G168700 Theobroma cacao HOM05D004360 ORTHO05D005195 5.0e-08 60.8 64 46.9
Lj9A695T55 Lonicera japonica HOM05D000086 ORTHO05D002912 6.5e-08 60.5 69 47.8
TAR628G0190 Trochodendron aralioides HOM05D000086 ORTHO05D002912 8.5e-08 60.1 39 66.7
Atru.chr13.2582 Acer truncatum HOM05D000086 ORTHO05D002912 1.5e-07 59.3 64 46.9
Nitab4.5_0000079g0170 Nicotiana tabacum HOM05D000086 ORTHO05D002912 4.2e-07 57.8 70 41.4
Cpa.g.sc142.4 Carica papaya HOM05D000086 ORTHO05D002912 5.5e-07 57.4 71 45.1
Eucgr.F04086 Eucalyptus grandis HOM05D000086 ORTHO05D002912 5.5e-07 57.4 63 46.0
Solyc06g064440.3 Solanum lycopersicum HOM05D000086 ORTHO05D002912 7.2e-07 57.0 66 37.9
Peaxi162Scf00078g01140 Petunia axillaris HOM05D000086 ORTHO05D002912 9.4e-07 56.6 70 41.4
Cfa012935 Carpinus fangiana HOM05D000086 ORTHO05D002912 1.6e-06 55.8 48 60.4
PSO210G5455 Papaver somniferum HOM05D000086 ORTHO05D002912 1.6e-06 55.8 39 59.0
PSO761G0411 Papaver somniferum HOM05D000086 ORTHO05D002912 1.6e-06 55.8 39 59.0
TPR.G4399 Trifolium pratense HOM05D000086 ORTHO05D002912 1.6e-06 55.8 61 42.6
Haze_21295 Corylus avellana HOM05D000086 ORTHO05D002912 2.1e-06 55.5 30 76.7
CSS0038596 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D002912 2.7e-06 55.1 36 61.1
Ca_19799_v3 Cicer arietinum L. HOM05D000086 ORTHO05D002912 2.7e-06 55.1 61 44.3
Os02g0557300 Oryza sativa ssp. japonica HOM05D000086 ORTHO05D002912 2.7e-06 55.1 62 41.9
Sed0023160 Sechium edule HOM05D000086 ORTHO05D002912 2.7e-06 55.1 63 36.5
Aqoxy5G01852 Aquilegia oxysepala HOM05D000086 ORTHO05D002912 3.6e-06 54.7 29 72.4
AT4G10150 Arabidopsis thaliana HOM05D000086 ORTHO05D002912 4.7e-06 54.3 66 43.9
Nitab4.5_0007335g0030 Nicotiana tabacum HOM05D000086 ORTHO05D002912 4.7e-06 54.3 74 37.8
Actinidia28220 Actinidia chinensis HOM05D000086 ORTHO05D002912 6.1e-06 53.9 62 45.2
Actinidia29365 Actinidia chinensis HOM05D000086 ORTHO05D002912 6.1e-06 53.9 62 45.2
MELO3C022123.2 Cucumis melo HOM05D000086 ORTHO05D002912 6.1e-06 53.9 68 41.2
Peaxi162Scf00818g00319 Petunia axillaris HOM05D000086 ORTHO05D002912 6.1e-06 53.9 71 42.3
PGSC0003DMG400033135 Solanum tuberosum HOM05D000086 ORTHO05D002912 6.1e-06 53.9 64 37.5
AT4G10160 Arabidopsis thaliana HOM05D000086 ORTHO05D002912 8.0e-06 53.5 64 42.2
AUR62000873 Chenopodium quinoa HOM05D000157 ORTHO05D000691 8.0e-06 53.5 71 35.2
Manes.18G109000 Manihot esculenta HOM05D000086 ORTHO05D002912 8.0e-06 53.5 55 45.5
Nn5g27230 Nelumbo nucifera HOM05D000086 ORTHO05D002912 8.0e-06 53.5 29 72.4
Phvul.011G215400 Phaseolus vulgaris HOM05D000086 ORTHO05D002912 8.0e-06 53.5 61 44.3
THA.LOC104813084 Tarenaya hassleriana HOM05D000086 ORTHO05D002912 8.0e-06 53.5 25 84.0
THA.LOC104815780 Tarenaya hassleriana HOM05D000086 ORTHO05D002912 8.0e-06 53.5 25 84.0


User provided reference genes

Program Settings