Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 5.9e-173 610.9 339 100.0
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 1.3e-108 397.1 342 72.5
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 4.6e-93 345.5 336 61.6
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.1e-89 332.8 345 59.1
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 1.3e-82 310.8 329 65.3
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 2.1e-82 310.1 296 68.6
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 1.2e-80 304.3 343 60.1
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 1.2e-80 304.3 343 60.1
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 9.9e-80 301.2 344 56.1
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 9.9e-80 301.2 333 58.6
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 4.9e-79 298.9 348 60.6
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 6.4e-79 298.5 280 64.6
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 3.2e-78 296.2 343 58.6
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 9.3e-78 294.7 347 58.8
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 9.3e-78 294.7 333 55.3
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 1.6e-77 293.9 318 60.1
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 2.7e-77 293.1 348 59.5
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 2.3e-76 290.0 352 54.5
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 8.7e-76 288.1 329 61.4
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 9.6e-75 284.6 351 56.1
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 2.8e-74 283.1 354 55.4
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 4.8e-74 282.3 337 56.4
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 1.1e-73 281.2 327 56.9
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.1e-73 279.6 320 58.4
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 3.1e-73 279.6 342 57.3
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 2.0e-72 276.9 345 52.5
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 2.0e-72 276.9 264 64.4
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 2.6e-72 276.6 261 65.1
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 3.4e-72 276.2 367 49.9
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.4e-72 276.2 319 58.6
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 3.4e-72 276.2 255 60.4
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 1.3e-71 274.2 317 56.2
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.3e-71 274.2 323 57.3
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 1.3e-71 274.2 262 59.9
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 1.7e-71 273.9 353 54.7
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 2.2e-71 273.5 320 57.5
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 4.9e-71 272.3 365 51.2
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 8.4e-71 271.6 354 53.1
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 1.4e-70 270.8 354 52.8
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 5.5e-70 268.9 361 52.6
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 7.1e-70 268.5 324 53.7
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 1.2e-69 267.7 329 50.5
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 2.7e-69 266.5 380 48.2
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 3.5e-69 266.2 334 59.0
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 1.0e-68 264.6 309 56.3
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.0e-68 264.6 330 54.5
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 1.0e-68 264.6 270 57.8
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 1.3e-68 264.2 300 55.0
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 3.0e-68 263.1 264 59.1
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 3.9e-68 262.7 346 52.9
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 6.7e-68 261.9 350 54.0
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 6.7e-68 261.9 340 51.8
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 1.1e-67 261.2 310 57.1
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 1.1e-67 261.2 348 48.0
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.5e-67 260.8 350 53.4
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 3.3e-67 259.6 272 55.1
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 4.3e-67 259.2 329 57.4
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 1.6e-66 257.3 270 56.3
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 1.6e-66 257.3 295 58.0
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 1.6e-66 257.3 269 56.5
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 1.4e-65 254.2 289 56.4
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 1.4e-65 254.2 347 53.6
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 5.3e-65 252.3 356 50.8
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 2.0e-64 250.4 350 52.6
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 4.5e-64 249.2 357 52.4
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 4.5e-64 249.2 256 61.7
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 5.9e-64 248.8 262 60.3
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 7.7e-64 248.4 339 50.4
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.0e-63 248.1 349 51.6
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.7e-63 247.3 265 58.9
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 3.8e-63 246.1 355 52.1
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 3.8e-63 246.1 263 59.7
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 5.0e-63 245.7 336 50.3
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 5.0e-63 245.7 311 48.2
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.4e-62 244.2 320 56.2
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 2.5e-62 243.4 337 51.9
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 2.5e-62 243.4 305 57.0
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 9.4e-62 241.5 275 56.7
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 3.6e-61 239.6 253 60.1
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 1.0e-60 238.0 255 54.1
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 1.8e-60 237.3 286 51.0
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 3.9e-60 236.1 341 49.9
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.0e-59 233.8 404 44.3
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 7.4e-59 231.9 264 56.1
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 2.2e-58 230.3 346 50.0
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 2.2e-58 230.3 350 46.3
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 3.7e-58 229.6 340 51.5
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 3.7e-58 229.6 276 50.4
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 8.2e-58 228.4 276 50.4
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 1.8e-57 227.3 266 52.6
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.3e-57 225.7 253 58.9
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 1.5e-56 224.2 308 47.4
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 2.6e-56 223.4 229 55.5
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 6.5e-55 218.8 271 49.1
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 8.5e-55 218.4 294 49.3
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 3.6e-53 213.0 338 46.2
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 4.4e-51 206.1 318 50.0
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 5.5e-46 189.1 151 66.2
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 2.1e-45 187.2 233 54.1
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 2.7e-45 186.8 165 63.6
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 1.3e-42 177.9 151 67.5
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 2.7e-37 160.2 123 69.1
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.6e-29 134.4 272 37.5
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 8.8e-28 128.6 313 37.4
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 3.7e-26 123.2 255 40.4
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 1.3e-23 114.8 115 53.9
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 3.8e-23 113.2 311 32.8
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 2.0e-19 100.9 143 53.1
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 3.7e-18 96.7 225 38.2
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 6.6e-15 85.9 46 84.8
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 6.6e-15 85.9 177 40.1
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 2.6e-11 73.9 45 68.9
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 4.4e-11 73.2 112 57.1
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 8.3e-10 68.9 132 36.4
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 1.9e-09 67.8 86 50.0
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 1.9e-09 67.8 54 51.9
Psat5g000080 Pisum sativum HOM05D006924 ORTHO05D008218 7.0e-09 65.9 88 48.9


User provided reference genes

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