Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 0.0e+00 1326.6 668 100.0
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 4.2e-247 858.2 671 68.4
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 4.3e-244 848.2 672 68.5
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.2e-232 809.3 674 66.3
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.5e-212 743.4 675 59.9
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 2.4e-210 736.1 667 60.7
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 9.4e-207 724.2 666 59.9
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 3.0e-205 719.2 668 59.7
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.7e-203 713.4 662 58.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.2e-203 713.0 670 58.7
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 4.8e-203 711.8 675 58.8
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.8e-202 709.9 666 59.0
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 8.5e-200 701.0 660 57.9
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 8.5e-200 701.0 675 57.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 3.9e-197 692.2 679 55.1
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.7e-195 686.8 670 55.8
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.7e-195 686.8 682 57.3
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 2.2e-195 686.4 652 57.1
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 4.8e-195 685.3 654 56.9
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 1.1e-194 684.1 673 55.3
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 3.5e-193 679.1 666 57.7
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 4.5e-193 678.7 669 55.8
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 1.0e-192 677.6 669 55.9
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 5.0e-192 675.2 656 54.6
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 9.4e-191 671.0 653 56.5
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 6.7e-189 664.8 656 55.3
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 8.8e-189 664.5 656 55.6
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.2e-188 664.1 678 54.0
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 1.2e-188 664.1 654 56.3
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.4e-186 657.1 667 55.2
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 4.1e-186 655.6 656 54.9
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 5.9e-185 651.7 655 55.4
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.1e-183 647.5 670 54.2
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 8.8e-181 637.9 717 52.0
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 2.6e-180 636.3 665 54.7
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 1.7e-179 633.6 644 53.3
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.8e-179 632.9 670 53.3
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.4e-178 629.8 652 53.2
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 5.4e-178 628.6 672 53.3
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 2.0e-177 626.7 616 57.0
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 5.0e-176 622.1 650 55.4
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.4e-173 614.0 665 52.3
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 1.2e-172 610.9 661 51.1
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 3.1e-170 602.8 666 49.8
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 4.5e-169 599.0 664 51.8
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 1.9e-167 593.6 671 51.7
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 3.6e-166 589.3 675 49.5
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 3.6e-166 589.3 675 49.5
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 3.1e-165 586.3 662 48.6
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 4.0e-165 585.9 657 48.7
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 4.0e-165 585.9 663 51.0
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 5.2e-165 585.5 670 48.7
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 5.8e-164 582.0 660 50.8
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.9e-159 567.0 723 45.2
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.9e-159 567.0 655 48.2
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 6.2e-158 562.0 722 46.1
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 1.8e-157 560.5 670 47.8
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 2.4e-154 550.1 662 49.4
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 9.2e-154 548.1 668 47.6
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 4.3e-151 539.3 657 46.6
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.2e-150 537.7 632 48.6
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 3.6e-150 536.2 602 51.0
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 2.0e-148 530.4 669 46.5
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 5.4e-146 522.3 673 46.5
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 9.5e-143 511.5 641 47.1
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 6.4e-139 498.8 540 51.7
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.1e-138 498.0 601 47.3
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 2.1e-137 493.8 681 42.9
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.7e-136 490.7 661 44.8
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 3.0e-136 490.0 664 44.4
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 3.0e-136 490.0 664 44.3
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.8e-132 475.7 377 66.3
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 2.2e-131 473.8 666 44.7
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 6.4e-131 472.2 376 66.5
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 3.9e-128 463.0 671 41.6
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.5e-127 461.1 377 65.0
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 2.5e-127 460.3 669 41.4
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 3.3e-127 459.9 685 41.9
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 3.6e-126 456.4 711 41.9
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 6.2e-126 455.7 670 41.0
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 3.1e-125 453.4 493 52.5
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 4.5e-124 449.5 562 49.1
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 3.2e-122 443.4 671 40.5
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.4e-117 427.9 659 38.8
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.6e-116 423.7 669 39.3
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 3.4e-116 423.3 485 49.1
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 7.6e-116 422.2 672 40.3
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.3e-115 421.4 466 51.9
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.2e-115 420.6 377 60.5
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 7.1e-114 415.6 661 38.0
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.8e-112 411.0 591 43.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 6.7e-112 409.1 715 38.5
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 2.8e-110 403.7 557 43.8
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.8e-109 401.0 643 39.0
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 3.2e-106 390.2 699 38.1
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 7.9e-105 385.6 352 59.4
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.7e-102 376.7 643 39.3
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 7.9e-89 332.4 465 40.4
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 2.2e-86 324.3 660 35.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.6e-76 291.6 285 56.1
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 6.3e-70 269.6 520 37.1
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.9e-67 260.8 307 49.8
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.1e-40 172.6 293 36.5
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.4e-40 172.2 434 29.7
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 5.1e-35 153.7 677 26.1
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 8.6e-35 152.9 355 33.0
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.2e-33 149.1 87 82.8
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 3.6e-33 147.5 225 40.0
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 1.2e-31 142.5 491 27.7
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.5e-31 142.1 608 25.7
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 5.4e-29 133.7 150 48.0
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.3e-27 129.0 160 46.2
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 2.8e-25 121.3 564 22.7
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 2.3e-19 101.7 99 58.6
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 5.1e-19 100.5 164 39.6
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 3.4e-15 87.8 82 56.1
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 2.1e-12 78.6 253 26.9
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.1e-11 73.9 63 55.6
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.9e-10 72.0 62 56.5
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.3e-10 70.9 68 52.9
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.3e-09 69.3 63 54.0
MELO3C031505.2 Cucumis melo HOM05D006351 ORTHO05D007796 8.1e-09 66.6 104 39.4
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 5.3e-08 63.9 51 60.8
Medtr1g013010 Medicago truncatula HOM05D006351 ORTHO05D007796 7.6e-07 60.1 71 46.5


User provided reference genes

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