Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 9.2e-87 323.6 167 100.0
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 7.1e-55 217.6 168 72.6
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 3.7e-51 205.3 169 70.4
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 1.8e-34 149.8 168 53.0
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 9.1e-34 147.5 171 53.8
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 3.2e-31 139.0 177 49.2
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 3.2e-31 139.0 177 49.2
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 3.6e-30 135.6 155 55.5
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 7.9e-30 134.4 171 51.5
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 8.8e-29 131.0 172 46.5
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 3.3e-28 129.0 168 50.6
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 5.7e-28 128.3 172 45.9
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 1.8e-26 123.2 172 47.1
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 4.1e-26 122.1 172 43.0
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 4.1e-26 122.1 186 48.9
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 9.1e-26 120.9 168 44.6
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 1.2e-25 120.6 165 41.8
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 2.0e-25 119.8 171 46.8
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.0e-24 117.5 170 45.9
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 1.0e-24 117.5 172 41.9
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 1.3e-24 117.1 165 41.2
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.9e-24 115.9 192 42.2
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 8.5e-24 114.4 170 44.1
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 1.4e-23 113.6 119 53.8
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 5.5e-23 111.7 166 45.2
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.6e-22 110.2 194 41.2
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 2.7e-22 109.4 170 44.7
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 2.7e-22 109.4 167 44.3
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 6.1e-22 108.2 170 44.7
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 3.0e-21 105.9 171 40.4
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 3.0e-21 105.9 170 44.1
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 2.8e-19 99.4 168 39.9
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 3.7e-19 99.0 171 40.9
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 6.3e-19 98.2 171 41.5
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 8.2e-19 97.8 151 42.4
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 1.1e-18 97.4 158 45.6
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 1.4e-18 97.1 113 51.3
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 2.4e-18 96.3 172 42.4
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 9.1e-18 94.4 151 41.7
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 9.1e-18 94.4 167 35.3
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 2.6e-17 92.8 109 49.5
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.0e-16 90.9 183 38.3
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 2.9e-16 89.4 144 38.9
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 8.5e-16 87.8 166 38.6
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 8.5e-16 87.8 170 41.2
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 5.5e-15 85.1 73 61.6
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 7.2e-15 84.7 173 35.3
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 2.1e-14 83.2 165 37.6
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 2.7e-14 82.8 168 35.7
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 2.7e-14 82.8 167 35.9
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 2.7e-14 82.8 167 40.1
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 8.0e-14 81.3 169 33.1
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 1.8e-13 80.1 114 41.2
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 1.8e-13 80.1 114 41.2
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 8.8e-13 77.8 152 40.1
Lalb_Chr24g0401951 Lupinus albus HOM05D008192 ORTHO05D010301 1.2e-12 77.4 163 36.8
Hund02985 Selenicereus undatus HOM05D008192 ORTHO05D010301 2.0e-12 76.6 181 37.0
arahy.Tifrunner.gnm1.ann1.XVGB1U Arachis hypogaea HOM05D008192 ORTHO05D010301 5.7e-12 75.1 186 30.6
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 5.7e-12 75.1 158 40.5
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 9.7e-12 74.3 193 33.2
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 3.7e-11 72.4 95 46.3
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 3.7e-11 72.4 148 33.8
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 1.4e-10 70.5 156 36.5
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 2.4e-10 69.7 89 47.2
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 2.4e-10 69.7 197 33.5
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 2.4e-10 69.7 75 52.0
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 4.1e-10 68.9 153 39.2
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 5.3e-10 68.6 168 30.4
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 7.0e-10 68.2 170 34.7
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 1.2e-09 67.4 114 39.5
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 1.2e-09 67.4 115 39.1
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.7e-09 66.2 158 33.5
Sopen06g014330 Solanum pennellii HOM05D000014 ORTHO05D010301 4.5e-09 65.5 141 38.3
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 7.7e-09 64.7 77 48.1
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 1.0e-08 64.3 134 37.3
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 2.2e-08 63.2 93 43.0
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 2.9e-08 62.8 79 44.3
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 3.8e-08 62.4 75 49.3
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 5.0e-08 62.0 73 42.5
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 5.0e-08 62.0 79 48.1
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 6.5e-08 61.6 120 37.5
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.1e-07 60.8 190 26.8
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.5e-07 60.5 96 40.6
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 1.9e-07 60.1 80 47.5
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 1.9e-07 60.1 97 39.2
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 1.9e-07 60.1 104 36.5
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.9e-07 60.1 115 37.4
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 2.5e-07 59.7 73 38.4
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 2.5e-07 59.7 164 31.1
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 3.2e-07 59.3 125 32.8
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 3.2e-07 59.3 95 36.8
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 3.2e-07 59.3 96 39.6
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 3.2e-07 59.3 96 39.6
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 3.2e-07 59.3 130 36.2
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 4.2e-07 58.9 140 35.0
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 5.5e-07 58.5 169 31.4
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 7.2e-07 58.2 98 37.8
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 7.2e-07 58.2 73 39.7
Os08g0270800 Oryza sativa ssp. japonica HOM05D037779 ORTHO05D004149 7.2e-07 58.2 193 31.1
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 9.4e-07 57.8 119 35.3
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 1.2e-06 57.4 73 42.5
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.6e-06 57.0 75 42.7
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.6e-06 57.0 168 31.0
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.6e-06 57.0 116 37.1
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 1.6e-06 57.0 136 34.6
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 2.1e-06 56.6 194 27.3
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 2.1e-06 56.6 75 42.7
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 2.7e-06 56.2 94 40.4
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 4.7e-06 55.5 113 34.5
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 4.7e-06 55.5 116 37.1
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 6.1e-06 55.1 81 44.4
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 8.0e-06 54.7 73 39.7


User provided reference genes

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