Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p008646 Quercus lobata HOM05D003498 ORTHO05D004191 1.6e-163 579.3 292 100.0
Cfa012954 Carpinus fangiana HOM05D002694 ORTHO05D002927 1.7e-56 223.8 272 50.7
QL02p026417 Quercus lobata HOM05D003498 ORTHO05D004191 1.7e-56 223.8 261 53.6
Haze_21315 Corylus avellana HOM05D003498 ORTHO05D004191 7.3e-55 218.4 261 50.2
CiPaw.08G003000 Carya illinoinensis HOM05D003498 ORTHO05D004191 2.0e-52 210.3 272 48.5
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 3.1e-45 186.4 232 50.0
FAN14G2218 Fragaria x ananassa HOM05D003498 ORTHO05D004191 2.2e-43 180.3 275 42.9
Haze_25285 Corylus avellana HOM05D003498 ORTHO05D004191 4.9e-43 179.1 259 45.2
FAN09G1233 Fragaria x ananassa HOM05D003498 ORTHO05D004191 1.1e-42 177.9 273 42.9
Potri.001G334900 Populus trichocarpa HOM05D003498 ORTHO05D004191 1.4e-42 177.6 270 42.6
FAN05G5642 Fragaria x ananassa HOM05D003498 ORTHO05D004191 1.9e-42 177.2 273 42.5
Duzib138G0533 Durio zibethinus HOM05D003498 ORTHO05D004191 9.3e-42 174.9 264 43.2
FAN02G3013 Fragaria x ananassa HOM05D003498 ORTHO05D004191 1.6e-41 174.1 273 42.1
FvH4_6g52930 Fragaria vesca HOM05D003498 ORTHO05D004191 2.7e-41 173.3 273 41.8
Sed0009078 Sechium edule HOM05D003498 ORTHO05D004191 3.5e-41 172.9 259 42.5
TAR622G0600 Trochodendron aralioides HOM05D003498 ORTHO05D004191 3.5e-41 172.9 272 42.6
Gorai.007G185700 Gossypium raimondii HOM05D003498 ORTHO05D004191 4.6e-41 172.6 261 42.1
Hma1.2p1_0279F.1_g112380 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 6.0e-41 172.2 273 42.5
ClCG07G012360 Citrullus lanatus HOM05D003498 ORTHO05D004191 7.8e-41 171.8 259 43.2
Gohir.A11G167100 Gossypium hirsutum HOM05D003498 ORTHO05D004191 7.8e-41 171.8 261 41.8
Sabra16G0216000 Salix brachista HOM05D003498 ORTHO05D004191 1.0e-40 171.4 271 41.7
PGR083G2492 Punica granatum HOM05D003498 ORTHO05D004191 3.9e-40 169.5 243 43.2
Actinidia18419 Actinidia chinensis HOM05D003498 ORTHO05D004191 5.1e-40 169.1 270 41.1
Gohir.D11G173400 Gossypium hirsutum HOM05D003498 ORTHO05D004191 5.1e-40 169.1 261 41.4
Eucgr.A01374 Eucalyptus grandis HOM05D003498 ORTHO05D004191 6.6e-40 168.7 272 41.9
Duzib133G0132 Durio zibethinus HOM05D003498 ORTHO05D004191 8.7e-40 168.3 259 41.3
Aqoxy3G02772 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.5e-39 167.5 270 41.9
VMungo1080G1345 Vigna mungo HOM05D003498 ORTHO05D004191 1.5e-39 167.5 272 41.9
CANSAT56G0570 Cannabis sativa HOM05D003498 ORTHO05D004191 1.9e-39 167.2 272 42.3
MD17G1016300 Malus domestica HOM05D003498 ORTHO05D004191 3.3e-39 166.4 267 40.8
CSS0027983 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 5.6e-39 165.6 272 41.2
Rhsim10G0009900 Rhododendron simsii HOM05D003498 ORTHO05D004191 7.3e-39 165.2 270 40.7
MELO3C017855.2 Cucumis melo HOM05D003498 ORTHO05D004191 9.6e-39 164.9 259 42.1
PGR083G1382 Punica granatum HOM05D003498 ORTHO05D004191 1.3e-38 164.5 260 41.2
Lalb_Chr10g0095001 Lupinus albus HOM05D003498 ORTHO05D004191 1.6e-38 164.1 271 41.3
Thecc.04G123800 Theobroma cacao HOM05D003498 ORTHO05D004191 2.1e-38 163.7 274 40.5
TAR374G1609 Trochodendron aralioides HOM05D003498 ORTHO05D004191 2.1e-38 163.7 270 41.1
Lj7A607T30 Lonicera japonica HOM05D003498 ORTHO05D004191 2.8e-38 163.3 259 41.7
CSS0006967 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 3.6e-38 162.9 272 40.8
HanXRQChr14g0450941 Helianthus annuus HOM05D003498 ORTHO05D004191 4.8e-38 162.5 273 38.8
CSS0002226 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 8.1e-38 161.8 260 41.2
Glyma.13G277200 Glycine max HOM05D003498 ORTHO05D004191 8.1e-38 161.8 272 40.4
CsaV3_4G001780 Cucumis sativus L. HOM05D003498 ORTHO05D004191 1.1e-37 161.4 259 41.3
Dinv33373 Davidia involucrata HOM05D003498 ORTHO05D004191 1.4e-37 161.0 245 42.9
CARHR285810 Cardamine hirsuta HOM05D003498 ORTHO05D004191 1.8e-37 160.6 261 39.1
Ciclev10016330m.g Citrus clementina HOM05D003498 ORTHO05D004191 4.0e-37 159.5 272 41.2
Gohir.A07G076000 Gossypium hirsutum HOM05D003498 ORTHO05D004191 4.0e-37 159.5 251 39.8
TWI36G0082 Tripterygium wilfordii HOM05D003498 ORTHO05D004191 4.0e-37 159.5 270 39.3
PGSC0003DMG400006157 Solanum tuberosum HOM05D003498 ORTHO05D004191 6.9e-37 158.7 280 39.6
Aqoxy7G03334 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 9.0e-37 158.3 271 40.6
CiPaw.07G235500 Carya illinoinensis HOM05D003498 ORTHO05D004191 9.0e-37 158.3 87 87.4
Rhsim08G0045600 Rhododendron simsii HOM05D003498 ORTHO05D004191 1.2e-36 157.9 276 39.5
THA.LOC104810770 Tarenaya hassleriana HOM05D003498 ORTHO05D004191 1.2e-36 157.9 257 40.1
Medtr0274s0020 Medicago truncatula HOM05D003498 ORTHO05D004191 1.5e-36 157.5 273 39.6
Medtr1g092440 Medicago truncatula HOM05D000397 ORTHO05D004191 1.5e-36 157.5 273 39.6
TPR.G38988 Trifolium pratense HOM05D003498 ORTHO05D004191 1.5e-36 157.5 270 40.4
GSVIVG01001834001 Vitis vinifera HOM05D003498 ORTHO05D004191 1.5e-36 157.5 272 41.2
arahy.Tifrunner.gnm1.ann1.IHQ30F Arachis hypogaea HOM05D003498 ORTHO05D004191 2.0e-36 157.1 264 39.4
arahy.Tifrunner.gnm1.ann1.MGT28Z Arachis hypogaea HOM05D003498 ORTHO05D004191 2.6e-36 156.8 264 39.0
Gorai.001G085600 Gossypium raimondii HOM05D003498 ORTHO05D004191 5.8e-36 155.6 251 39.8
Prupe.3G301400 Prunus persica HOM05D003498 ORTHO05D004191 7.6e-36 155.2 230 43.0
Actinidia05930 Actinidia chinensis HOM05D003498 ORTHO05D004191 9.9e-36 154.8 219 44.3
Cpa.g.sc802.1 Carica papaya HOM05D003498 ORTHO05D004191 1.3e-35 154.5 259 39.8
Lj1g0028146 Lotus japonicus HOM05D003498 ORTHO05D004191 1.3e-35 154.5 259 40.5
Manes.14G169300 Manihot esculenta HOM05D003498 ORTHO05D004191 1.7e-35 154.1 127 63.0
Prupe.3G071800 Prunus persica HOM05D003498 ORTHO05D004191 1.7e-35 154.1 229 43.2
Lsat_1_v5_gn_2_93800 Lactuca sativa HOM05D003498 ORTHO05D004191 2.2e-35 153.7 271 38.7
AL8G35910 Arabidopsis lyrata HOM05D003498 ORTHO05D004191 3.8e-35 152.9 261 37.9
CSS0030890 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 3.8e-35 152.9 269 38.7
Solyc07g048010.4 Solanum lycopersicum HOM05D003498 ORTHO05D004191 3.8e-35 152.9 264 40.2
vmacro05933 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 3.8e-35 152.9 223 43.0
Gohir.D07G080500 Gossypium hirsutum HOM05D003498 ORTHO05D004191 6.4e-35 152.1 220 43.2
Atru.chr6.2501 Acer truncatum HOM05D003498 ORTHO05D004191 8.4e-35 151.8 220 43.2
arahy.Tifrunner.gnm1.ann1.C6G3CE Arachis hypogaea HOM05D003498 ORTHO05D004191 8.4e-35 151.8 261 38.7
Carub.0008s2011 Capsella rubella HOM05D003498 ORTHO05D004191 8.4e-35 151.8 261 37.5
Atru.chr10.1225 Acer truncatum HOM05D003498 ORTHO05D004191 1.1e-34 151.4 220 42.7
Nitab4.5_0000441g0220 Nicotiana tabacum HOM05D003498 ORTHO05D004191 1.1e-34 151.4 281 38.1
Sopen07g024440 Solanum pennellii HOM05D003498 ORTHO05D004191 1.1e-34 151.4 264 39.8
Thhalv10014606m.g Eutrema salsugineum HOM05D003498 ORTHO05D004191 1.4e-34 151.0 228 42.5
PSO170G3520 Papaver somniferum HOM05D003498 ORTHO05D004191 1.4e-34 151.0 275 39.6
PSO210G3977 Papaver somniferum HOM05D003498 ORTHO05D004191 1.4e-34 151.0 275 40.0
Nn3g16542 Nelumbo nucifera HOM05D003498 ORTHO05D004191 1.9e-34 150.6 259 40.5
Phvul.005G072200 Phaseolus vulgaris HOM05D003498 ORTHO05D004191 2.4e-34 150.2 232 42.2
Psat5g244520 Pisum sativum HOM05D003498 ORTHO05D004191 3.2e-34 149.8 222 43.2
Nitab4.5_0005699g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 4.2e-34 149.4 280 37.9
Sp6g21120 Schrenkiella parvula HOM05D003498 ORTHO05D004191 4.2e-34 149.4 261 38.7
Nitab4.5_0011275g0010 Nicotiana tabacum HOM05D003498 ORTHO05D004191 5.4e-34 149.1 267 40.1
ECA238G3044 Erigeron canadensis HOM05D003498 ORTHO05D004191 7.1e-34 148.7 269 38.3
Lj5g0005525 Lotus japonicus HOM05D003498 ORTHO05D004191 7.1e-34 148.7 254 40.6
Manes.14G170700 Manihot esculenta HOM05D003498 ORTHO05D004191 7.1e-34 148.7 119 66.4
Nitab4.5_0002877g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 7.1e-34 148.7 261 39.5
Oeu001847.2 Olea europaea HOM05D003498 ORTHO05D004191 7.1e-34 148.7 220 42.3
PSO541G3815 Papaver somniferum HOM05D003498 ORTHO05D004191 7.1e-34 148.7 275 40.0
CAN.G1461.1 Capsicum annuum HOM05D003498 ORTHO05D004191 1.2e-33 147.9 263 39.5
Aa31LG1G11800 Aethionema arabicum HOM05D003498 ORTHO05D004191 1.6e-33 147.5 265 37.4
MD09G1015900 Malus domestica HOM05D003498 ORTHO05D004191 1.6e-33 147.5 224 42.4
RcHm_v2.0_Chr2g0174641 Rosa chinensis HOM05D003498 ORTHO05D004191 1.6e-33 147.5 230 42.2
PSO675G6488 Papaver somniferum HOM05D003498 ORTHO05D004191 2.1e-33 147.1 263 39.9
Peaxi162Scf00776g00325 Petunia axillaris HOM05D003498 ORTHO05D004191 2.1e-33 147.1 281 38.4
arahy.Tifrunner.gnm1.ann1.82NANE Arachis hypogaea HOM05D003498 ORTHO05D004191 2.7e-33 146.7 261 37.5
CSS0032491 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 2.7e-33 146.7 219 42.9
AT5G59440 Arabidopsis thaliana HOM05D003498 ORTHO05D004191 3.5e-33 146.4 234 39.3
MBI11_g00914_MAGBIO Magnolia biondii HOM05D003498 ORTHO05D004191 3.5e-33 146.4 260 40.4
Medtr0271s0010 Medicago truncatula HOM05D003498 ORTHO05D004191 4.6e-33 146.0 133 59.4
Hund09045 Selenicereus undatus HOM05D003498 ORTHO05D004191 6.0e-33 145.6 219 42.0
HanXRQChr05g0138221 Helianthus annuus HOM05D003498 ORTHO05D004191 7.9e-33 145.2 139 57.6
HanXRQChr05g0142761 Helianthus annuus HOM05D003498 ORTHO05D004191 7.9e-33 145.2 139 57.6
Migut.K01441 Erythranthe guttata HOM05D003498 ORTHO05D004191 1.0e-32 144.8 257 37.7
Oeu001405.1 Olea europaea HOM05D003498 ORTHO05D004191 1.0e-32 144.8 220 41.8
Ca_01840_v3 Cicer arietinum L. HOM05D003498 ORTHO05D004191 5.1e-32 142.5 224 40.6
Cc07_g00530 Coffea canephora HOM05D003498 ORTHO05D004191 8.7e-32 141.7 265 38.9
Ah.01g001720 Amaranthus hybridus HOM05D003498 ORTHO05D004191 1.1e-31 141.4 223 41.3
Peaxi162Scf00147g01820 Petunia axillaris HOM05D003498 ORTHO05D004191 1.5e-31 141.0 265 38.9
SGA_v2.0_scaffold47G17560 Striga asiatica HOM05D003498 ORTHO05D004191 2.5e-31 140.2 274 38.3
Sc07g0003610 Simmondsia chinensis HOM05D003498 ORTHO05D004191 3.3e-31 139.8 214 42.5
vmacro18322 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 3.3e-31 139.8 115 63.5
Lsat_1_v5_gn_2_32401 Lactuca sativa HOM05D003498 ORTHO05D004191 4.3e-31 139.4 223 40.4
Cc06_g23000 Coffea canephora HOM05D003498 ORTHO05D004191 1.3e-30 137.9 268 37.7
BcaB08g36258 Brassica carinata HOM05D003498 ORTHO05D004191 1.6e-30 137.5 220 39.5
BcaC04g19772 Brassica carinata HOM05D003498 ORTHO05D004191 1.6e-30 137.5 223 39.9
C09p51820 Brassica napus HOM05D000758 ORTHO05D001216 1.6e-30 137.5 223 39.9
BolC9t58046H Brassica oleracea HOM05D000758 ORTHO05D004191 1.6e-30 137.5 223 39.9
ATR1120G052 Amborella trichopoda HOM05D003498 ORTHO05D004191 2.1e-30 137.1 250 38.8
Zm00001eb109870 Zea mays HOM05D003498 ORTHO05D004191 2.1e-30 137.1 223 39.9
MSTRG.15556 Avicennia marina HOM05D003498 ORTHO05D004191 3.7e-30 136.3 218 40.4
AUR62017642 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.7e-30 136.3 217 40.6
SGA_v2.0_scaffold68G22828 Striga asiatica HOM05D003498 ORTHO05D004191 3.7e-30 136.3 274 37.6
BraA10t43747Z Brassica rapa HOM05D003498 ORTHO05D004191 4.8e-30 136.0 223 39.5
EL10Ac9g22898 Beta vulgaris HOM05D003498 ORTHO05D004191 6.2e-30 135.6 246 39.4
A10p16650 Brassica napus HOM05D000758 ORTHO05D004191 1.1e-29 134.8 223 39.5
AUR62042988 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.8e-29 134.0 217 40.1
AUR62003275 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.3e-29 132.5 217 40.1
HPP92_003500 Vanilla planifolia HOM05D003498 ORTHO05D004191 5.3e-29 132.5 252 36.1
AUR62012870 Chenopodium quinoa HOM05D003498 ORTHO05D004191 6.9e-29 132.1 217 39.6
AUR62007665 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.8e-28 129.0 80 77.5
AUR62020308 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.8e-28 129.0 80 76.2
AUR62036945 Chenopodium quinoa HOM05D003498 ORTHO05D004191 7.6e-28 128.6 80 76.2
Os07g0639900 Oryza sativa ssp. japonica HOM05D003498 ORTHO05D004191 9.9e-28 128.3 223 38.1
HPP92_026896 Vanilla planifolia HOM05D003498 ORTHO05D004191 1.3e-27 127.9 225 36.9
AUR62022230 Chenopodium quinoa HOM05D003498 ORTHO05D000001 2.2e-27 127.1 79 77.2
unitig_748.g7053 Utricularia gibba HOM05D003498 ORTHO05D004191 2.2e-27 127.1 216 39.4
AUR62042316 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.8e-27 126.3 80 75.0
Lalb_Chr01g0016861 Lupinus albus HOM05D003498 ORTHO05D004191 3.8e-27 126.3 135 53.3
CDE09G0325 Ceratophyllum demersum HOM05D003498 ORTHO05D004191 8.4e-27 125.2 222 38.7
AUR62012113 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.1e-26 124.8 216 39.8
DCAR_027394 Daucus carota HOM05D003498 ORTHO05D004191 1.9e-26 124.0 219 39.3
AUR62025775 Chenopodium quinoa HOM05D003498 ORTHO05D018212 2.4e-26 123.6 80 72.5
Mapoly0001s0438 Marchantia polymorpha HOM05D003498 ORTHO05D004191 4.6e-25 119.4 219 37.4
SEGI_21909 Sequoiadendron giganteum HOM05D003498 ORTHO05D004191 1.3e-24 117.9 223 36.8
Pp3c13_20320 Physcomitrium patens HOM05D003498 ORTHO05D004191 6.7e-24 115.5 223 36.8
CSS0025632 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.1e-23 114.8 263 34.6
CBR_g30299 Chara braunii HOM05D003498 ORTHO05D004191 1.3e-22 111.3 85 64.7
SMO201G0123 Selaginella moellendorffii HOM05D003498 ORTHO05D004191 2.8e-22 110.2 80 63.8
CBR_g50851 Chara braunii HOM05D003498 ORTHO05D004191 1.8e-21 107.5 77 66.2
PRCOL_00002439 Prasinoderma coloniale HOM05D003498 ORTHO05D004191 2.4e-21 107.1 75 69.3
AUR62040396 Chenopodium quinoa HOM05D000421 ORTHO05D004191 4.0e-21 106.3 70 72.9
AagrBONN_evm.TU.Sc2ySwM_228.2546 Anthoceros agrestis HOM05D003498 ORTHO05D004191 9.0e-21 105.1 81 64.2
AUR62034396 Chenopodium quinoa HOM05D003498 ORTHO05D004191 9.0e-21 105.1 86 64.0
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 1.3e-19 101.3 188 36.2
MCO11G310 Micromonas commoda HOM05D003498 ORTHO05D004191 1.7e-19 100.9 77 57.1
Cre03.g190800 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 2.5e-18 97.1 76 61.8
AUR62033715 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.5e-18 95.9 198 33.3
CSS0031931 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 6.0e-17 92.4 99 56.6
Cre03.g190750 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 3.0e-16 90.1 76 57.9
Cfa023828 Carpinus fangiana HOM05D003498 ORTHO05D004191 2.5e-15 87.0 75 56.0
C05p26950 Brassica napus HOM05D003498 ORTHO05D004191 1.8e-13 80.9 96 45.8
BolC5t31414H Brassica oleracea HOM05D003498 ORTHO05D004191 9.0e-13 78.6 90 45.6
AUR62041023 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.2e-12 78.2 53 69.8
Actinidia38210 Actinidia chinensis HOM05D003498 ORTHO05D004191 7.6e-12 75.5 176 32.4
Haze_27494 Corylus avellana HOM05D003498 ORTHO05D004191 1.0e-11 75.1 92 43.5
Aqoxy51s003 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 4.2e-10 69.7 169 32.5
HanXRQChr14g0428161 Helianthus annuus HOM05D003498 ORTHO05D004191 4.6e-09 66.2 172 30.8
HanXRQChr05g0130941 Helianthus annuus HOM05D003498 ORTHO05D004191 3.9e-08 63.2 42 71.4
TPR.G22201 Trifolium pratense HOM05D003498 ORTHO05D004191 1.1e-07 61.6 168 29.2
HanXRQChr10g0305081 Helianthus annuus HOM05D003498 ORTHO05D004191 1.9e-07 60.8 42 69.0
Medtr0271s0030 Medicago truncatula HOM05D003498 ORTHO05D004191 9.7e-07 58.5 32 84.4
Zm00001eb248420 Zea mays HOM05D003498 ORTHO05D004191 9.7e-07 58.5 46 65.2
TPR.G23191 Trifolium pratense HOM05D003498 ORTHO05D005148 1.3e-06 58.2 34 79.4
BcaC05g26822 Brassica carinata HOM05D003498 ORTHO05D004191 1.6e-06 57.8 76 42.1
Manes.06G007550 Manihot esculenta HOM05D003498 ORTHO05D004191 1.6e-06 57.8 169 29.6
AUR62043688 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.7e-06 56.6 38 73.7
Lalb_Chr01g0016871 Lupinus albus HOM05D003498 ORTHO05D004191 4.8e-06 56.2 34 79.4


User provided reference genes

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