Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 1.1e-215 753.1 397 100.0
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.7e-208 729.2 397 96.2
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 1.5e-207 726.1 397 95.7
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.5e-207 725.3 397 95.7
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 8.9e-205 716.8 397 95.0
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 2.0e-204 715.7 397 93.7
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 2.0e-204 715.7 397 93.5
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 3.4e-204 714.9 397 94.2
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 5.8e-204 714.1 397 93.7
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 9.8e-204 713.4 397 94.0
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 9.8e-204 713.4 397 93.5
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 1.7e-203 712.6 397 93.7
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 2.2e-203 712.2 397 92.9
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 2.9e-203 711.8 397 93.5
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.9e-203 711.8 397 93.2
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 2.9e-203 711.8 397 93.2
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 4.9e-203 711.1 397 92.9
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 2.4e-202 708.8 397 92.9
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 2.4e-202 708.8 397 93.2
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 5.4e-202 707.6 397 93.5
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 1.6e-201 706.1 397 93.2
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.6e-201 706.1 397 93.2
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 2.7e-201 705.3 397 92.2
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 4.6e-201 704.5 402 91.5
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 6.0e-201 704.1 397 91.7
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 6.0e-201 704.1 397 92.7
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 6.0e-201 704.1 397 92.7
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 6.0e-201 704.1 397 91.9
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 1.3e-200 703.0 397 92.2
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 1.7e-200 702.6 397 92.2
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 3.9e-200 701.4 397 92.4
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 5.1e-200 701.0 397 92.2
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 1.5e-199 699.5 397 91.7
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 92.0
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 92.0
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 5.6e-199 697.6 397 91.7
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.2e-198 696.4 398 91.7
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 1.2e-198 696.4 397 90.9
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 2.8e-198 695.3 397 91.9
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 2.8e-198 695.3 397 92.2
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.8e-198 695.3 397 90.7
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 2.8e-198 695.3 397 91.7
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 8.1e-198 693.7 397 90.7
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 1.1e-197 693.3 397 91.4
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 1.1e-197 693.3 397 90.4
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 1.4e-197 693.0 397 91.7
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 1.8e-197 692.6 397 91.2
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 1.8e-197 692.6 397 90.4
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 1.8e-197 692.6 398 91.5
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 2.3e-197 692.2 397 89.9
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 4.0e-197 691.4 397 90.4
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.5e-196 689.5 398 90.7
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.5e-196 689.5 397 90.2
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 2.0e-196 689.1 397 90.2
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 2.0e-196 689.1 397 89.9
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 2.0e-196 689.1 397 89.9
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 3.4e-196 688.3 397 89.2
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 3.4e-196 688.3 397 89.2
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 5.8e-196 687.6 397 89.7
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 9.9e-196 686.8 397 89.9
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.3e-195 686.4 397 89.2
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 2.2e-195 685.6 397 90.4
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 3.7e-195 684.9 400 89.5
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 1.1e-194 683.3 397 90.4
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 2.4e-194 682.2 500 76.6
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 4.1e-194 681.4 397 88.7
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 4.6e-193 677.9 398 88.7
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 4.6e-193 677.9 397 88.2
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 1.3e-192 676.4 405 87.4
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 1.7e-192 676.0 397 89.2
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 7.3e-191 670.6 397 87.9
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 9.5e-191 670.2 399 86.2
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 3.6e-190 668.3 397 86.6
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 5.2e-189 664.5 397 88.9
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 2.2e-187 659.1 397 87.7
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 8.4e-187 657.1 397 87.9
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 3.2e-186 655.2 392 88.0
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 4.2e-186 654.8 397 85.9
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 7.1e-186 654.1 401 85.0
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.6e-185 652.9 489 74.6
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 1.6e-185 652.9 439 78.8
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 2.1e-185 652.5 436 82.3
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 3.5e-185 651.7 397 84.4
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 3.5e-185 651.7 397 84.1
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 4.6e-185 651.4 397 84.9
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 1.7e-184 649.4 417 84.4
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 2.3e-184 649.0 397 84.4
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 1.1e-183 646.7 476 75.2
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 1.9e-183 646.0 397 84.1
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 1.9e-183 646.0 397 84.1
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 3.3e-183 645.2 397 83.9
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 7.3e-183 644.0 397 84.9
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 1.6e-182 642.9 397 83.6
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 1.6e-182 642.9 397 83.9
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 1.6e-182 642.9 397 83.9
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 1.6e-182 642.9 397 83.9
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 2.8e-182 642.1 397 83.9
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 2.8e-182 642.1 397 83.9
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 2.8e-182 642.1 397 83.9
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 1.4e-181 639.8 397 83.1
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 1.4e-181 639.8 397 83.6
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 1.4e-181 639.8 397 83.6
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 3.4e-180 635.2 397 84.6
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 9.9e-180 633.6 438 80.1
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 1.7e-179 632.9 397 82.9
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 2.2e-179 632.5 368 90.8
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 3.8e-179 631.7 354 94.1
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 6.4e-179 630.9 397 82.4
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 9.3e-178 627.1 397 83.9
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 1.2e-177 626.7 354 92.1
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 1.1e-175 620.2 354 91.2
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 9.6e-175 617.1 430 78.4
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 2.0e-172 609.4 397 77.8
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 8.4e-171 604.0 387 83.7
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 2.3e-168 595.9 397 76.8
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 1.5e-167 593.2 396 75.3
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 8.1e-166 587.4 397 75.6
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 4.3e-159 565.1 397 78.6
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 7.1e-154 547.7 397 75.6
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 1.3e-147 526.9 395 69.1
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 1.5e-143 513.5 347 77.8
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 7.4e-143 511.1 422 69.4
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 4.2e-138 495.4 270 95.6
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 2.4e-125 453.0 311 78.5
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 2.3e-112 409.8 226 94.2
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 2.2e-110 403.3 395 54.2
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 8.0e-105 384.8 402 51.2
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 8.3e-102 374.8 216 90.3
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 3.3e-90 336.3 401 48.9
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 1.5e-87 327.4 214 79.0
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 1.1e-82 311.2 214 75.7
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 3.5e-68 263.1 150 92.7
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 5.6e-66 255.8 150 90.0
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 5.1e-59 232.6 319 42.6
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 3.1e-56 223.4 182 70.9
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 1.4e-48 198.0 146 68.5
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 1.1e-42 178.3 243 49.8
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 2.4e-40 170.6 205 44.9
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 7.6e-39 165.6 95 88.4
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 7.6e-39 165.6 95 88.4
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 3.1e-16 90.5 71 71.8
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 4.5e-15 86.7 48 81.2
arahy.Tifrunner.gnm1.ann1.2K5AT5 Arachis hypogaea HOM05D005164 ORTHO05D006398 1.3e-09 68.6 47 72.3
Lalb_Chr07g0184681 Lupinus albus HOM05D001185 ORTHO05D003777 2.2e-06 57.8 298 23.8
ECA240G1489 Erigeron canadensis HOM05D001185 ORTHO05D003777 5.0e-06 56.6 300 24.0
PSO170G5175 Papaver somniferum HOM05D001185 ORTHO05D003777 5.0e-06 56.6 299 24.1
PSO700G0370 Papaver somniferum HOM05D001185 ORTHO05D003777 6.5e-06 56.2 299 24.1
Lj4g0024278 Lotus japonicus HOM05D001185 ORTHO05D003777 8.5e-06 55.8 298 24.2


User provided reference genes

Program Settings