Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 8.5e-70 266.9 138 100.0
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 2.9e-62 241.9 135 90.4
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 3.8e-62 241.5 136 88.2
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.1e-61 240.0 135 88.9
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.1e-61 240.0 135 89.6
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.4e-61 239.6 135 90.4
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.9e-61 239.2 135 88.9
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.9e-61 239.2 135 88.9
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.9e-61 239.2 135 88.9
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 1.9e-61 239.2 137 89.8
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.2e-61 238.0 135 88.1
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 5.5e-61 237.7 135 88.1
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 7.2e-61 237.3 138 88.4
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 9.4e-61 236.9 139 86.3
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 9.4e-61 236.9 135 87.4
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 9.4e-61 236.9 135 87.4
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 9.4e-61 236.9 143 87.4
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.6e-60 236.1 135 87.4
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.6e-60 236.1 135 87.4
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 2.1e-60 235.7 135 87.4
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 2.1e-60 235.7 138 84.1
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 2.1e-60 235.7 138 84.1
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 2.1e-60 235.7 138 84.1
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 2.7e-60 235.3 135 85.9
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 3.6e-60 235.0 138 86.2
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 7.9e-60 233.8 135 85.9
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 1.0e-59 233.4 131 87.8
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.8e-59 232.6 135 84.4
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.8e-59 232.6 143 82.5
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 2.3e-59 232.3 135 87.4
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 3.0e-59 231.9 135 84.4
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 3.0e-59 231.9 135 85.2
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 5.1e-59 231.1 135 86.7
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 6.7e-59 230.7 135 84.4
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 6.7e-59 230.7 136 84.6
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 8.8e-59 230.3 147 82.3
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 8.8e-59 230.3 135 84.4
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 8.8e-59 230.3 135 85.9
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 8.8e-59 230.3 135 85.9
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 1.1e-58 229.9 136 86.0
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 2.0e-58 229.2 134 85.1
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 2.0e-58 229.2 144 84.7
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.0e-58 229.2 135 84.4
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 2.0e-58 229.2 138 84.8
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 2.0e-58 229.2 135 84.4
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 2.6e-58 228.8 140 81.4
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 4.4e-58 228.0 131 86.3
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 4.4e-58 228.0 139 82.0
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 5.7e-58 227.6 128 86.7
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 1.7e-57 226.1 137 82.5
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 4.8e-57 224.6 132 84.8
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 8.2e-57 223.8 135 82.2
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.1e-56 223.4 164 74.4
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.4e-56 223.0 168 73.8
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 4.1e-56 221.5 131 82.4
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 5.3e-56 221.1 136 79.4
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 1.5e-55 219.5 139 79.1
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 4.5e-55 218.0 139 77.0
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 4.5e-55 218.0 143 77.6
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 5.9e-55 217.6 135 82.2
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 5.9e-55 217.6 135 82.2
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 7.7e-55 217.2 135 81.5
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 1.3e-54 216.5 141 78.0
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 1.7e-54 216.1 135 80.7
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 1.7e-54 216.1 138 79.0
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 1.7e-54 216.1 138 79.0
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 2.2e-54 215.7 136 77.9
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 2.2e-54 215.7 135 80.7
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 2.2e-54 215.7 135 80.7
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 2.2e-54 215.7 135 80.7
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 2.2e-54 215.7 139 82.0
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 2.2e-54 215.7 139 82.0
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 3.8e-54 214.9 135 80.7
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 3.8e-54 214.9 135 80.7
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 6.5e-54 214.2 146 76.0
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 8.5e-54 213.8 138 81.2
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 8.5e-54 213.8 122 86.9
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 1.5e-53 213.0 135 79.3
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 1.9e-53 212.6 136 78.7
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 1.9e-53 212.6 122 86.1
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 2.5e-53 212.2 139 76.3
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 3.2e-53 211.8 135 78.5
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 3.2e-53 211.8 135 78.5
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 3.2e-53 211.8 135 77.0
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 3.2e-53 211.8 137 75.2
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 3.2e-53 211.8 132 82.6
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 5.5e-53 211.1 135 77.0
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 7.2e-53 210.7 135 78.5
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 9.4e-53 210.3 138 77.5
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 9.4e-53 210.3 136 75.7
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 2.1e-52 209.1 135 79.3
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 2.7e-52 208.8 128 80.5
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 3.6e-52 208.4 127 81.1
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 6.1e-52 207.6 135 78.5
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 4.4e-50 201.4 122 80.3
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 7.4e-50 200.7 130 73.8
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 1.3e-49 199.9 135 77.8
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 1.7e-49 199.5 130 74.6
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 1.4e-48 196.4 130 71.5
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 1.8e-48 196.1 124 80.6
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 1.8e-48 196.1 124 80.6
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.6e-47 193.0 109 89.9
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 2.0e-47 192.6 112 86.6
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 2.0e-47 192.6 127 70.9
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.3e-46 189.9 114 86.0
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 2.2e-46 189.1 114 86.8
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 3.8e-46 188.3 109 89.0
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 5.0e-46 188.0 109 89.0
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 6.5e-46 187.6 105 90.5
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.1e-45 186.8 109 85.3
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 1.9e-45 186.0 144 69.4
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 5.5e-45 184.5 123 70.7
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 6.8e-43 177.6 137 72.3
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 1.2e-42 176.8 113 81.4
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 2.2e-41 172.6 126 71.4
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 5.9e-39 164.5 109 78.9
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.7e-38 162.9 106 73.6
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 2.9e-38 162.2 118 72.0
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 9.4e-37 157.1 115 67.0
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.6e-36 156.4 98 81.6
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 2.3e-35 152.5 136 59.6
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 2.6e-34 149.1 139 63.3
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 2.6e-34 149.1 83 92.8
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 7.5e-34 147.5 84 89.3
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 3.7e-33 145.2 181 48.6
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 9.1e-32 140.6 83 86.7
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 2.9e-30 135.6 85 83.5
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 1.5e-29 133.3 83 80.7
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 3.6e-28 128.6 83 81.9
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 3.0e-27 125.6 104 57.7
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 4.0e-27 125.2 131 55.0
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.2e-26 123.6 70 84.3
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.5e-26 123.2 120 59.2
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 3.4e-26 122.1 99 67.7
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 9.2e-24 114.0 114 50.9
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 3.5e-23 112.1 97 60.8
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.0e-22 110.5 63 84.1
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 7.3e-21 104.4 64 76.6
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 4.0e-19 98.6 52 88.5
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 6.8e-19 97.8 52 88.5
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 5.8e-18 94.7 54 81.5
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 7.5e-18 94.4 61 80.3
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 7.5e-18 94.4 60 83.3
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 1.7e-17 93.2 132 36.4
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.9e-16 89.7 61 78.7
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 2.4e-16 89.4 61 72.1
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 3.5e-15 85.5 76 60.5
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 6.0e-15 84.7 45 86.7
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 8.6e-14 80.9 125 39.2
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 3.4e-10 68.9 85 49.4
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 3.2e-08 62.4 126 33.3
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 2.7e-07 59.3 55 60.0
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 4.6e-07 58.5 41 70.7


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