Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 1.4e-142 509.6 255 100.0
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 3.4e-117 425.2 253 85.0
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 1.1e-115 420.2 252 83.7
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 3.0e-113 412.1 253 84.2
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 4.3e-112 408.3 253 80.6
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 1.7e-111 406.4 249 81.5
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.7e-111 406.4 250 80.4
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 6.3e-111 404.4 258 79.8
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.8e-110 402.9 252 77.8
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 2.4e-110 402.5 254 79.5
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 6.9e-110 401.0 252 80.2
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 9.1e-110 400.6 251 80.5
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 9.1e-110 400.6 254 79.1
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 3.4e-109 398.7 252 81.0
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 3.4e-109 398.7 253 79.1
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 4.5e-109 398.3 253 79.1
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 5.9e-109 397.9 253 79.1
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 7.7e-109 397.5 249 79.5
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 1.0e-108 397.1 253 78.7
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 2.9e-108 395.6 250 80.0
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 5.0e-108 394.8 256 78.9
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 8.5e-108 394.0 249 79.1
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 8.5e-108 394.0 258 77.1
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 1.1e-107 393.7 250 80.4
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 1.4e-107 393.3 253 78.3
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 4.2e-107 391.7 252 78.2
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 1.6e-106 389.8 253 76.3
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 6.1e-106 387.9 265 75.5
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.0e-105 387.1 249 79.1
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 1.4e-105 386.7 252 78.2
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 1.4e-105 386.7 252 78.2
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 1.4e-105 386.7 254 78.3
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 3.9e-105 385.2 253 76.7
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 5.1e-105 384.8 269 75.1
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.5e-104 383.3 256 77.3
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 2.6e-104 382.5 253 77.1
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 3.3e-104 382.1 270 74.4
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 4.4e-104 381.7 250 76.4
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 2.2e-103 379.4 255 76.9
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 6.3e-103 377.9 253 75.5
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 6.3e-103 377.9 252 79.4
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 1.8e-102 376.3 250 77.2
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 2.4e-102 375.9 251 76.1
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 3.1e-102 375.6 253 74.7
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 5.3e-102 374.8 253 73.9
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 7.0e-102 374.4 253 74.7
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 7.0e-102 374.4 251 77.3
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 9.1e-102 374.0 304 66.8
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 1.2e-101 373.6 250 74.4
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 1.2e-101 373.6 252 75.0
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 5.9e-101 371.3 249 73.9
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 5.9e-101 371.3 250 73.6
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 1.0e-100 370.5 250 74.8
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 1.0e-100 370.5 250 74.8
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.0e-100 370.5 248 75.4
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.0e-100 370.5 248 75.4
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.3e-100 370.2 253 74.3
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.7e-100 369.8 250 74.0
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 1.7e-100 369.8 236 75.4
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 2.2e-100 369.4 250 74.4
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 2.9e-100 369.0 253 73.9
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 2.9e-100 369.0 253 73.9
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 5.0e-100 368.2 250 72.4
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 2.5e-99 365.9 250 72.8
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 9.4e-99 364.0 256 72.7
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 1.2e-98 363.6 250 74.8
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.2e-98 363.6 251 72.1
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 3.6e-98 362.1 253 73.1
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 4.7e-98 361.7 249 71.5
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 8.0e-98 360.9 250 72.4
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 2.3e-97 359.4 250 72.0
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 2.3e-97 359.4 250 72.0
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 3.9e-97 358.6 248 73.8
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 3.9e-97 358.6 255 72.5
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 5.2e-97 358.2 259 69.9
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 5.2e-97 358.2 249 72.3
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 5.2e-97 358.2 237 75.5
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 4.4e-96 355.1 251 72.5
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 7.4e-96 354.4 250 69.6
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 9.7e-96 354.0 250 69.6
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 9.7e-96 354.0 250 69.6
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 1.7e-95 353.2 254 72.4
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 1.7e-95 353.2 246 75.6
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 6.3e-95 351.3 255 70.2
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.4e-94 350.1 273 65.6
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 7.0e-94 347.8 255 68.6
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 9.1e-94 347.4 248 71.8
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 2.0e-93 346.3 235 74.0
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 7.7e-93 344.4 254 71.3
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 2.2e-92 342.8 235 74.0
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 1.5e-91 340.1 248 69.0
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 1.6e-90 336.7 255 68.6
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 8.0e-90 334.3 236 72.9
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.0e-89 334.0 247 68.4
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 2.6e-88 329.3 239 70.7
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 6.3e-87 324.7 252 64.7
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 1.4e-86 323.6 254 64.6
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 1.6e-85 320.1 252 67.9
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.0e-81 305.8 202 76.2
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 2.0e-80 303.1 253 65.2
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 6.3e-79 298.1 200 76.0
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.1e-78 297.4 197 76.1
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 1.4e-78 297.0 252 60.7
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 7.0e-78 294.7 233 67.8
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 7.0e-78 294.7 252 61.9
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 5.9e-77 291.6 252 59.9
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 7.7e-77 291.2 253 61.3
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 3.6e-74 282.3 207 69.1
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 6.1e-74 281.6 166 83.1
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 3.7e-71 272.3 183 74.3
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 1.2e-69 267.3 191 70.2
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 2.7e-69 266.2 178 77.0
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 3.3e-67 259.2 248 57.7
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 3.1e-65 252.7 244 54.9
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 2.3e-60 236.5 254 53.1
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 5.0e-60 235.3 217 59.9
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 9.5e-59 231.1 253 54.2
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 4.1e-54 215.7 219 53.4
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.6e-53 213.8 139 80.6
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 5.1e-52 208.8 113 87.6
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 4.3e-51 205.7 129 79.1
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 3.4e-48 196.1 139 75.5
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.4e-46 189.9 101 87.1
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 8.6e-44 181.4 146 64.4
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.8e-41 173.7 270 39.6
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.3e-28 130.2 89 74.2
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 1.5e-27 127.5 67 86.6
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 1.6e-26 124.0 117 57.3
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 1.3e-23 114.4 57 89.5
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 8.4e-23 111.7 74 73.0
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 3.9e-20 102.8 77 67.5
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 2.5e-19 100.1 72 65.3
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 3.7e-18 96.3 75 72.0
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 1.5e-16 90.9 69 68.1
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 3.4e-16 89.7 71 60.6
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 8.7e-12 75.1 66 62.1
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 2.8e-10 70.1 43 72.1
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 5.3e-09 65.9 58 63.8


User provided reference genes

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