Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 0.0e+00 3231.0 1818 100.0
QL01p007875 Quercus lobata HOM05D004493 ORTHO05D005117 0.0e+00 2206.8 1267 93.1
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 0.0e+00 2061.2 1711 69.9
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 0.0e+00 2037.3 1839 67.4
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 0.0e+00 1906.7 1679 65.2
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 0.0e+00 1471.8 1725 54.2
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 0.0e+00 1471.8 1725 54.2
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 0.0e+00 1436.0 1718 53.4
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 0.0e+00 1428.7 1717 52.6
Atru.chr3.2057 Acer truncatum HOM05D004493 ORTHO05D005117 0.0e+00 1363.2 1826 53.2
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 0.0e+00 1357.0 1781 50.3
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 0.0e+00 1355.5 1736 50.8
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 0.0e+00 1342.4 1741 50.6
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 0.0e+00 1296.6 1707 50.6
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 0.0e+00 1294.6 1905 49.2
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 0.0e+00 1291.2 1750 48.7
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 0.0e+00 1287.3 1744 48.6
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 0.0e+00 1250.0 1720 48.4
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 0.0e+00 1248.8 1735 47.7
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 0.0e+00 1245.7 1726 47.5
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 0.0e+00 1239.2 1723 47.4
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 0.0e+00 1217.6 1764 46.8
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 0.0e+00 1217.2 1821 45.8
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 0.0e+00 1197.6 1838 44.7
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 0.0e+00 1191.8 1794 46.7
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 0.0e+00 1173.3 1715 46.1
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 0.0e+00 1141.7 1635 46.2
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 0.0e+00 1115.9 1828 44.9
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 0.0e+00 1095.1 1861 42.1
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 0.0e+00 1092.8 1727 44.4
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 0.0e+00 1089.7 1708 44.7
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 0.0e+00 1080.1 1710 44.8
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 0.0e+00 1076.2 1779 43.3
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 8.8e-308 1061.2 1841 41.7
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 1.7e-306 1057.0 1709 43.4
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 4.8e-306 1055.4 1704 44.3
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 1.8e-305 1053.5 1748 43.5
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 1.5e-302 1043.9 1709 44.0
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 4.0e-300 1035.8 1706 43.8
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 4.4e-299 1032.3 2114 39.3
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 3.1e-297 1026.2 1709 44.0
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 1.0e-295 1021.1 1865 41.5
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 3.0e-292 1009.6 1709 43.7
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 2.8e-290 1003.0 1800 41.4
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 2.9e-287 993.0 1765 41.0
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 4.0e-284 982.6 1732 42.4
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 7.5e-283 978.4 1731 42.8
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 1.7e-282 977.2 1807 40.0
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 2.9e-282 976.5 1801 41.3
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 3.5e-280 969.5 1762 40.9
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 5.9e-280 968.8 1770 41.5
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 2.8e-277 959.9 1728 41.1
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 1.4e-276 957.6 1763 40.7
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 3.1e-276 956.4 1712 41.2
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 3.4e-275 953.0 1697 42.3
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 7.0e-273 945.3 1789 40.7
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 6.6e-271 938.7 1738 40.8
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 6.2e-269 932.2 1807 39.1
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 2.3e-268 930.2 1703 42.0
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 2.6e-267 926.8 1807 38.9
Eucgr.J01744 Eucalyptus grandis HOM05D004493 ORTHO05D005117 2.5e-262 910.2 1577 42.5
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 2.3e-260 903.7 1747 39.3
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 1.2e-259 901.4 1644 40.3
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 8.4e-258 895.2 1695 41.2
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 1.4e-252 877.9 1729 39.4
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 3.4e-251 873.2 1703 39.3
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 1.6e-240 837.8 1708 38.9
QL01p007909 Quercus lobata HOM05D004453 ORTHO05D005375 1.3e-239 834.7 770 75.7
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 6.7e-239 832.4 1168 46.5
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 1.1e-238 831.6 1761 38.8
SGA_v2.0_scaffold6G03332 Striga asiatica HOM05D004493 ORTHO05D005117 1.2e-232 811.6 1711 38.5
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 7.4e-230 802.4 1724 37.4
VMungo0720G0327 Vigna mungo HOM05D004493 ORTHO05D005117 1.4e-220 771.5 1489 40.6
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 3.2e-217 760.4 1710 36.8
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 4.6e-216 756.5 1693 37.6
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 9.7e-214 748.8 1770 35.1
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 4.2e-209 733.4 1745 34.8
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 3.3e-206 723.8 1708 36.4
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea HOM05D004493 ORTHO05D005117 7.7e-195 686.0 958 45.1
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 5.0e-194 683.3 1715 35.3
Gohir.A08G083000 Gossypium hirsutum HOM05D004493 ORTHO05D005117 8.5e-194 682.6 996 48.3
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 2.3e-191 674.5 1678 34.4
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 7.2e-177 626.3 1671 33.6
Sc06g0004140 Simmondsia chinensis HOM05D004493 ORTHO05D005117 6.3e-173 613.2 1466 36.7
FAN11G0901 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.3e-170 604.7 784 46.6
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 4.0e-167 594.0 1795 32.3
COL.COLO4_35068 Corchorus olitorius HOM05D004493 ORTHO05D005117 8.0e-160 569.7 934 44.4
Cpa.g.sc119.15 Carica papaya HOM05D004493 ORTHO05D005117 1.5e-158 565.5 876 43.9
Hund28035 Selenicereus undatus HOM05D004493 ORTHO05D005117 7.5e-158 563.1 1421 35.5
Hund28037 Selenicereus undatus HOM05D004493 ORTHO05D005117 7.5e-158 563.1 1421 35.5
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 8.1e-152 543.1 860 45.5
Nitab4.5_0000075g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 4.0e-135 487.6 845 39.4
Lj2A889G19 Lonicera japonica HOM05D004493 ORTHO05D005117 4.9e-133 480.7 914 39.3
QL01p007891 Quercus lobata HOM05D004493 ORTHO05D005117 1.5e-118 432.6 400 79.0
Nitab4.5_0000075g0170 Nicotiana tabacum HOM05D004493 ORTHO05D005117 1.9e-116 425.6 905 41.0
Dinv13491 Davidia involucrata HOM05D004493 ORTHO05D005117 2.1e-112 412.1 648 47.7
Ah.06g182270 Amaranthus hybridus HOM05D004493 ORTHO05D005117 4.3e-105 387.9 446 45.1
Peaxi162Scf00186g00168 Petunia axillaris HOM05D004493 ORTHO05D005117 2.1e-99 369.0 834 38.8
Ah.06g182280 Amaranthus hybridus HOM05D004493 ORTHO05D005117 4.6e-99 367.9 922 36.9
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 1.5e-97 362.8 1056 29.8
CDE02G1557 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 1.1e-81 310.1 1026 33.6
Solyc02g032480.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 5.7e-81 307.8 680 34.0
COL.COLO4_35067 Corchorus olitorius HOM05D004493 ORTHO05D005117 1.3e-80 306.6 793 33.9
Peaxi162Scf00186g01612 Petunia axillaris HOM05D004493 ORTHO05D005117 2.4e-79 302.4 635 33.7
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 9.1e-79 300.4 1300 26.3
Eucgr.J01742 Eucalyptus grandis HOM05D004493 ORTHO05D005117 2.6e-78 298.9 467 39.8
AagrBONN_evm.TU.Sc2ySwM_117.2650 Anthoceros agrestis HOM05D004493 ORTHO05D005117 2.6e-73 282.3 1085 27.6
MSTRG.929 Avicennia marina HOM05D004493 ORTHO05D005117 2.6e-73 282.3 824 36.2
Pp3c13_12950 Physcomitrium patens HOM05D004493 ORTHO05D005117 2.6e-73 282.3 1745 26.0
vmacro09616 Vaccinium macrocarpon HOM05D004493 ORTHO05D005117 2.8e-72 278.9 656 42.5
Hma1.2p1_0589F.1_g184750 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 2.2e-64 252.7 502 39.6
Solyc02g032380.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 1.9e-60 239.6 473 39.5
VMungo0720G2527 Vigna mungo HOM05D004493 ORTHO05D005117 9.5e-60 237.3 238 54.2
Potri.001G001201 Populus trichocarpa HOM05D004493 ORTHO05D005117 3.1e-55 222.2 233 57.1
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 1.7e-53 216.5 167 70.7
CDE02G2692 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 5.6e-52 211.5 236 47.5
Hma1.2p1_0589F.1_g184760 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 5.6e-52 211.5 194 58.8
Hund05058 Selenicereus undatus HOM05D004493 ORTHO05D005117 4.0e-50 205.3 240 47.5
BcaNung06979 Brassica carinata HOM05D004493 ORTHO05D005117 5.2e-50 204.9 187 56.7
SEGI_27502 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 4.6e-46 191.8 989 29.9
Eucgr.J01832 Eucalyptus grandis HOM05D004493 ORTHO05D005117 1.3e-45 190.3 146 58.2
Solyc02g032490.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 8.9e-42 177.6 194 51.0
Solyc02g032450.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 2.0e-41 176.4 683 33.4
Lj2A889T20 Lonicera japonica HOM05D004493 ORTHO05D005117 4.9e-32 145.2 653 32.3
CSS0001625 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 8.3e-32 144.4 93 73.1
Peaxi162Scf00186g01613 Petunia axillaris HOM05D004493 ORTHO05D005117 5.4e-31 141.7 198 46.0
MSTRG.12812 Avicennia marina HOM05D004493 ORTHO05D005117 6.0e-30 138.3 133 56.4
CSS0040729 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 3.0e-29 136.0 139 57.6
FAN03G1805 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.5e-28 132.9 217 39.6
Zm00001eb202920 Zea mays HOM05D004493 ORTHO05D005117 5.6e-28 131.7 139 48.2
QL04p013873 Quercus lobata HOM05D004493 ORTHO05D005117 2.1e-27 129.8 70 90.0
ATR0906G001 Amborella trichopoda HOM05D004493 ORTHO05D005117 1.2e-25 124.0 889 27.2
CSS0009629 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 4.2e-23 115.5 374 32.4
ATR0906G002 Amborella trichopoda HOM05D004493 ORTHO05D005117 9.2e-23 114.4 385 29.9
Cpa.g.sc119.16 Carica papaya HOM05D004493 ORTHO05D005117 3.9e-21 109.0 81 66.7
FAN14G4108 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.8e-19 102.8 68 67.6
Cpa.g.sc119.17 Carica papaya HOM05D004493 ORTHO05D005117 1.4e-18 100.5 297 35.4
FAN26G0295 Fragaria x ananassa HOM05D000290 ORTHO05D006676 4.0e-18 99.0 68 66.2
MSTRG.12811 Avicennia marina HOM05D004493 ORTHO05D005117 6.9e-18 98.2 114 59.6
SMO167G0064 Selaginella moellendorffii HOM05D004493 ORTHO05D005117 1.2e-17 97.4 565 23.2
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 1.3e-16 94.0 62 67.7
FAN14G5048 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.7e-16 93.6 62 66.1
SEGI_28014 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 1.7e-16 93.6 116 37.9
FAN12G3781 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.4e-15 89.7 60 66.7
Potri.001G001250 Populus trichocarpa HOM05D004493 ORTHO05D005117 1.1e-12 80.9 370 31.4
FAN10G2778 Fragaria x ananassa HOM05D004493 ORTHO05D005117 7.3e-12 78.2 210 27.6
SEGI_11629 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 3.6e-11 75.9 126 38.1
unitig_0.g1240 Utricularia gibba HOM05D004493 ORTHO05D005117 3.6e-11 75.9 378 31.7
Os07g0685400 Oryza sativa ssp. japonica HOM05D004493 ORTHO05D005117 5.3e-10 72.0 465 28.0
Zm00001eb411990 Zea mays HOM05D004493 ORTHO05D005117 9.9e-09 67.8 102 37.3
Gohir.A07G008001 Gossypium hirsutum HOM05D036473 ORTHO05D036031 3.8e-08 65.9 99 35.4
Gorai.001G008300 Gossypium raimondii HOM05D036473 ORTHO05D036031 8.4e-08 64.7 88 38.6
Sopen01g019210 Solanum pennellii HOM05D004493 ORTHO05D005117 9.3e-07 61.2 68 51.5
CDE02G0298 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 7.9e-06 58.2 62 45.2


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