Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 0.0e+00 1739.9 884 100.0
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 7.7e-225 784.6 847 55.7
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 1.6e-217 760.4 848 53.4
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 3.0e-213 746.1 846 52.1
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 6.8e-213 745.0 848 53.5
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 9.8e-212 741.1 848 52.4
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 6.4e-211 738.4 848 51.8
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 1.7e-208 730.3 853 51.2
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 3.9e-208 729.2 848 51.3
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 5.6e-207 725.3 850 51.5
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 7.3e-207 724.9 896 51.8
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 3.6e-206 722.6 846 51.5
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 1.2e-204 717.6 848 51.1
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 2.0e-204 716.8 848 51.5
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 3.4e-204 716.1 850 50.9
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 8.3e-203 711.4 850 50.4
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 2.4e-202 709.9 848 51.5
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 7.0e-202 708.4 849 50.8
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 2.0e-201 706.8 848 50.8
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 3.9e-200 702.6 848 50.7
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 1.1e-199 701.0 844 50.6
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 4.3e-199 699.1 852 49.9
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 6.2e-198 695.3 849 49.6
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 4.0e-197 692.6 846 50.5
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 5.8e-196 688.7 853 48.7
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 9.9e-196 688.0 848 49.2
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 1.9e-194 683.7 852 48.0
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 4.1e-194 682.6 848 50.0
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 2.1e-193 680.2 883 48.0
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 6.0e-193 678.7 848 48.3
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 1.0e-192 677.9 852 47.8
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 1.3e-192 677.6 848 48.6
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 2.3e-192 676.8 846 49.1
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 3.9e-192 676.0 848 48.8
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 1.5e-191 674.1 852 47.9
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 4.3e-191 672.5 852 47.8
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 1.2e-190 671.0 853 47.1
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 1.6e-190 670.6 854 47.0
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 2.1e-190 670.2 854 47.3
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 2.8e-190 669.8 885 47.5
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 4.7e-190 669.1 847 48.5
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 1.4e-189 667.5 847 48.3
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 1.4e-189 667.5 846 48.7
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 2.4e-189 666.8 860 48.3
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 4.0e-189 666.0 846 48.3
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.2e-188 664.5 848 47.5
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 1.5e-188 664.1 848 47.8
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 5.8e-188 662.1 861 47.2
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 7.6e-188 661.8 848 47.2
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 7.6e-188 661.8 648 59.4
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 9.9e-188 661.4 845 47.8
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 9.9e-188 661.4 846 47.4
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 2.9e-187 659.8 848 48.2
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 3.8e-187 659.4 848 48.5
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 6.4e-187 658.7 850 47.1
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 6.4e-187 658.7 647 58.9
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 8.4e-187 658.3 850 47.6
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 1.1e-186 657.9 851 47.4
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 1.1e-186 657.9 848 47.8
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 2.4e-186 656.8 848 47.8
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 5.4e-186 655.6 847 47.7
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 9.2e-186 654.8 848 46.8
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 1.2e-185 654.4 854 47.0
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 1.7e-184 650.6 846 47.9
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 2.3e-184 650.2 885 46.4
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 3.0e-184 649.8 849 47.2
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 3.0e-184 649.8 849 47.8
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 1.9e-183 647.1 885 46.1
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 2.5e-183 646.7 853 46.8
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 9.6e-183 644.8 841 47.9
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 2.1e-182 643.7 849 46.1
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 9.0e-181 638.3 850 46.4
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 2.6e-180 636.7 851 46.5
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 2.6e-180 636.7 845 46.7
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 9.9e-180 634.8 841 46.6
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 2.2e-179 633.6 851 47.6
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 1.9e-178 630.6 841 46.7
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 1.3e-174 617.8 849 45.5
Lsat_1_v5_gn_2_37520 Lactuca sativa HOM05D001598 ORTHO05D007192 2.0e-172 610.5 855 45.8
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 2.6e-172 610.1 849 44.9
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 5.8e-172 609.0 920 44.6
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 8.4e-171 605.1 656 54.4
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 1.8e-165 587.4 836 45.0
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 4.0e-165 586.3 853 45.1
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 5.6e-159 565.8 848 44.5
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 1.4e-154 551.2 859 41.9
CSS0048937 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 1.1e-149 535.0 384 73.7
Lj2C893G11 Lonicera japonica HOM05D001598 ORTHO05D007192 1.1e-149 535.0 390 72.1
FvH4_3g26260 Fragaria vesca HOM05D001598 ORTHO05D007192 1.9e-146 524.2 383 71.8
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 6.1e-145 519.2 852 40.7
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 3.9e-144 516.5 855 40.6
Atru.ctg664.11 Acer truncatum HOM05D001598 ORTHO05D007192 6.7e-144 515.8 779 44.0
Ca_06138_v3 Cicer arietinum L. HOM05D001598 ORTHO05D007192 1.3e-142 511.5 846 41.7
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 7.9e-137 492.3 875 39.3
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 8.8e-136 488.8 851 38.3
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 7.2e-130 469.2 866 36.8
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.4e-128 464.9 593 46.5
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 6.3e-126 456.1 853 36.7
HPP92_013468 Vanilla planifolia HOM05D001598 ORTHO05D007192 2.8e-110 404.1 668 41.3
SEGI_00915 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.6e-108 398.3 345 60.3
Lj2A895G19 Lonicera japonica HOM05D001598 ORTHO05D007192 7.8e-100 369.4 303 65.7
Cre10.g451400 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 1.3e-83 315.5 370 47.3
SHI25335 Sapria himalayana HOM05D001598 ORTHO05D000001 1.1e-82 312.4 237 64.6
CSS0046041 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 7.1e-77 293.1 314 54.1
AagrBONN_evm.TU.Sc2ySwM_117.1323 Anthoceros agrestis HOM05D001598 ORTHO05D007192 3.5e-76 290.8 322 46.9
Lj2A895T22 Lonicera japonica HOM05D001598 ORTHO05D007192 5.2e-72 276.9 310 52.6
TPR.G11462 Trifolium pratense HOM05D001598 ORTHO05D007192 9.0e-64 249.6 285 53.3
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 5.6e-58 230.3 348 40.5
MCO09G295 Micromonas commoda HOM05D001598 ORTHO05D007192 3.6e-57 227.6 341 42.2
HPP92_013448 Vanilla planifolia HOM05D001598 ORTHO05D007192 1.4e-53 215.7 308 44.2
vmacro23059 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 1.0e-51 209.5 153 72.5
SEGI_37017 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.3e-46 192.6 298 40.9
TPR.G24627 Trifolium pratense HOM05D001598 ORTHO05D007192 1.8e-35 155.6 149 59.1
CBR_g53773 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-34 151.8 444 29.1
Lj2C893T10 Lonicera japonica HOM05D001598 ORTHO05D007192 4.1e-32 144.4 81 85.2
Nn1g08035 Nelumbo nucifera HOM05D001598 ORTHO05D007192 2.2e-25 122.1 76 73.7
Zm00001eb067470 Zea mays HOM05D001598 ORTHO05D007192 4.5e-23 114.4 325 31.7
SGA_v2.0_scaffold6G03251 Striga asiatica HOM05D001598 ORTHO05D007192 1.7e-22 112.5 92 65.2
BcaB08g37328 Brassica carinata HOM05D001598 ORTHO05D007192 2.9e-22 111.7 76 69.7
SEGI_32063 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 1.4e-21 109.4 65 75.4
Glyma.14G045450 Glycine max HOM05D001598 ORTHO05D007192 7.2e-21 107.1 65 80.0
Ca_02574_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.6e-20 104.8 135 48.9
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.3e-19 102.1 78 69.2
CBR_g53784 Chara braunii HOM05D001598 ORTHO05D007192 3.9e-19 101.3 97 52.6
PRCOL_00002568 Prasinoderma coloniale HOM05D001598 ORTHO05D007192 7.0e-16 90.5 118 42.4
Gohir.D02G147550 Gossypium hirsutum HOM05D006828 ORTHO05D008312 3.8e-14 84.7 50 80.0
Gorai.013G167300 Gossypium raimondii HOM05D006828 ORTHO05D008312 3.8e-14 84.7 50 80.0
TPR.G22712 Trifolium pratense HOM05D001598 ORTHO05D046738 8.5e-14 83.6 92 56.5
Os04g0661600 Oryza sativa ssp. japonica HOM05D001598 ORTHO05D007192 1.9e-13 82.4 60 68.3
CBR_g53769 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-13 80.9 53 67.9
BcaB08g37330 Brassica carinata HOM05D001598 ORTHO05D007192 9.4e-13 80.1 61 65.6
BcaC04g19497 Brassica carinata HOM05D001598 ORTHO05D007192 1.6e-12 79.3 57 68.4
Gohir.D05G085901 Gossypium hirsutum HOM05D001598 ORTHO05D008312 4.7e-12 77.8 50 74.0
MCO03G199 Micromonas commoda HOM05D001598 ORTHO05D007192 5.2e-11 74.3 87 42.5
SMO307G0084 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 1.1e-10 73.2 62 51.6
Cre06.g282150 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 7.4e-10 70.5 152 34.9
TAR374G1328 Trochodendron aralioides HOM05D001598 ORTHO05D007192 4.8e-09 67.8 51 66.7
Nn1g00103 Nelumbo nucifera HOM05D001598 ORTHO05D007192 1.2e-07 63.2 43 74.4
TWI56G1164 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 2.9e-06 58.5 43 65.1


User provided reference genes

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