Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p000940 Quercus lobata HOM05D001377 ORTHO05D001221 2.5e-75 285.4 150 100.0
QL01p000944 Quercus lobata HOM05D001377 ORTHO05D001221 3.4e-72 275.0 146 99.3
QL01p000954 Quercus lobata HOM05D001377 ORTHO05D001221 4.6e-69 264.6 146 96.6
Cfa018650 Carpinus fangiana HOM05D001377 ORTHO05D001221 9.9e-48 193.7 146 74.7
Haze_17417 Corylus avellana HOM05D001377 ORTHO05D001221 5.4e-46 188.0 150 72.7
CiPaw.15G002200 Carya illinoinensis HOM05D001377 ORTHO05D001221 9.6e-43 177.2 146 69.2
Dinv16523 Davidia involucrata HOM05D001377 ORTHO05D001221 9.9e-32 140.6 151 60.3
Dinv05807 Davidia involucrata HOM05D001377 ORTHO05D001221 3.9e-28 128.6 158 55.1
Potri.008G114800 Populus trichocarpa HOM05D001377 ORTHO05D001221 1.1e-25 120.6 146 51.4
TAR371G0717 Trochodendron aralioides HOM05D001377 ORTHO05D001221 1.5e-24 116.7 157 50.3
MD13G1048500 Malus domestica HOM05D001377 ORTHO05D001221 2.6e-24 115.9 148 52.0
MD16G1049800 Malus domestica HOM05D001377 ORTHO05D001221 4.9e-23 111.7 147 50.3
TAR629G0360 Trochodendron aralioides HOM05D001377 ORTHO05D001221 1.6e-21 106.7 156 50.0
Ciclev10030538m.g Citrus clementina HOM05D001377 ORTHO05D001221 2.7e-21 105.9 143 47.6
Thecc.02G363000 Theobroma cacao HOM05D001377 ORTHO05D001221 7.9e-21 104.4 141 48.9
GSVIVG01011972001 Vitis vinifera HOM05D001377 ORTHO05D001221 1.8e-20 103.2 153 49.0
Hma1.2p1_0605F.1_g187860 Hydrangea macrophylla HOM05D001377 ORTHO05D001221 3.0e-20 102.4 153 47.1
CSS0046282 Camellia sinensis var. sinensis HOM05D001377 ORTHO05D001221 6.3e-18 94.7 155 46.5
TWI79G1631 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 1.1e-17 94.0 149 46.3
CANSAT11G1821 Cannabis sativa HOM05D001377 ORTHO05D001221 4.1e-17 92.0 138 45.7
Cpa.g.sc1.235 Carica papaya HOM05D001377 ORTHO05D001221 5.3e-17 91.7 147 43.5
TAR622G0959 Trochodendron aralioides HOM05D001377 ORTHO05D001221 2.0e-16 89.7 154 46.1
Gorai.008G187500 Gossypium raimondii HOM05D001377 ORTHO05D001221 2.9e-15 85.9 96 50.0
Eucgr.G02361 Eucalyptus grandis HOM05D001377 ORTHO05D001221 6.5e-15 84.7 145 44.1
Duzib251G0529 Durio zibethinus HOM05D001377 ORTHO05D001221 8.5e-15 84.3 122 45.1
COL.COLO4_09721 Corchorus olitorius HOM05D001377 ORTHO05D001221 1.2e-13 80.5 94 54.3
Glyma.02G101800 Glycine max HOM05D001377 ORTHO05D001221 1.2e-13 80.5 148 41.9
Phvul.003G025500 Phaseolus vulgaris HOM05D001377 ORTHO05D001221 2.1e-13 79.7 151 41.7
Actinidia16605 Actinidia chinensis HOM05D001377 ORTHO05D001221 1.0e-12 77.4 192 38.5
Aqoxy3G00643 Aquilegia oxysepala HOM05D001377 ORTHO05D001221 1.8e-12 76.6 107 51.4
Actinidia14837 Actinidia chinensis HOM05D001377 ORTHO05D001221 1.1e-11 73.9 159 42.1
Cc11_g10760 Coffea canephora HOM05D001377 ORTHO05D001221 1.5e-11 73.6 148 39.9
Gohir.A12G172400 Gossypium hirsutum HOM05D001377 ORTHO05D001221 1.5e-11 73.6 96 45.8
Medtr6g015285 Medicago truncatula HOM05D001377 ORTHO05D001221 1.5e-11 73.6 148 39.9
Nn4g23682 Nelumbo nucifera HOM05D001377 ORTHO05D001221 1.5e-11 73.6 162 42.0
Medtr6g015270 Medicago truncatula HOM05D001377 ORTHO05D001221 1.9e-11 73.2 148 39.9
Sc11g0002990 Simmondsia chinensis HOM05D001377 ORTHO05D001221 1.9e-11 73.2 152 39.5
Migut.L01107 Erythranthe guttata HOM05D001377 ORTHO05D001221 7.4e-11 71.2 142 40.8
Lj6C767T8 Lonicera japonica HOM05D001377 ORTHO05D001221 1.7e-10 70.1 152 42.1
PSO017G3961 Papaver somniferum HOM05D001377 ORTHO05D001221 2.8e-10 69.3 150 38.0
FAN07G2260 Fragaria x ananassa HOM05D001377 ORTHO05D001221 3.7e-10 68.9 98 42.9
Gohir.D12G174900 Gossypium hirsutum HOM05D001377 ORTHO05D001221 4.8e-10 68.6 97 43.3
Sabra08G0087000 Salix brachista HOM05D001377 ORTHO05D001221 6.3e-10 68.2 143 38.5
Atru.chr11.1384 Acer truncatum HOM05D001377 ORTHO05D001221 2.4e-09 66.2 147 38.1
FAN17G1780 Fragaria x ananassa HOM05D001377 ORTHO05D001221 2.4e-09 66.2 98 40.8
Lj2g0006914 Lotus japonicus HOM05D001377 ORTHO05D001221 2.4e-09 66.2 160 36.2
CsaV3_5G028920 Cucumis sativus L. HOM05D001377 ORTHO05D001221 4.1e-09 65.5 133 35.3
RcHm_v2.0_Chr7g0226101 Rosa chinensis HOM05D001377 ORTHO05D001221 4.1e-09 65.5 100 41.0
Prupe.3G240800 Prunus persica HOM05D001377 ORTHO05D001221 5.3e-09 65.1 149 37.6
Eucgr.J01462 Eucalyptus grandis HOM05D001377 ORTHO05D001221 6.9e-09 64.7 148 35.8
Actinidia17619 Actinidia chinensis HOM05D001377 ORTHO05D001221 2.0e-08 63.2 152 35.5
MELO3C005352.2 Cucumis melo HOM05D001377 ORTHO05D001221 2.6e-08 62.8 148 34.5
Sed0017705 Sechium edule HOM05D001377 ORTHO05D001221 2.6e-08 62.8 146 35.6
MSTRG.810 Avicennia marina HOM05D001377 ORTHO05D001221 4.5e-08 62.0 127 40.2
FAN12G3823 Fragaria x ananassa HOM05D001377 ORTHO05D001221 4.5e-08 62.0 96 43.8
Nn3g17678 Nelumbo nucifera HOM05D001377 ORTHO05D001221 4.5e-08 62.0 154 40.3
SalBow8G4999 Salvia bowleyana HOM05D001377 ORTHO05D001221 4.5e-08 62.0 139 37.4
TPR.G10013 Trifolium pratense HOM05D001377 ORTHO05D001221 5.9e-08 61.6 160 35.6
FvH4_4g28241 Fragaria vesca HOM05D001377 ORTHO05D001221 7.7e-08 61.2 96 43.8
ClCG01G005770 Citrullus lanatus HOM05D001377 ORTHO05D001221 1.0e-07 60.8 105 38.1
ClCG11G005290 Citrullus lanatus HOM05D001377 ORTHO05D001221 1.0e-07 60.8 117 42.7
PGR042G1271 Punica granatum HOM05D001377 ORTHO05D001221 1.0e-07 60.8 142 34.5
GSVIVG01031076001 Vitis vinifera HOM05D001377 ORTHO05D001221 1.0e-07 60.8 79 45.6
Haze_14110 Corylus avellana HOM05D001377 ORTHO05D001221 1.3e-07 60.5 157 36.3
Haze_14112 Corylus avellana HOM05D001377 ORTHO05D001221 1.3e-07 60.5 157 36.3
Migut.H00533 Erythranthe guttata HOM05D001377 ORTHO05D001221 1.7e-07 60.1 84 42.9
CiPaw.03G005400 Carya illinoinensis HOM05D001377 ORTHO05D001221 2.9e-07 59.3 156 37.8
PSO478G2613 Papaver somniferum HOM05D001377 ORTHO05D001221 2.9e-07 59.3 153 36.6
Ca_04307_v3 Cicer arietinum L. HOM05D001377 ORTHO05D001221 3.8e-07 58.9 159 34.6
Ah.16g102090 Amaranthus hybridus HOM05D001377 ORTHO05D001221 5.0e-07 58.5 62 51.6
Hma1.2p1_0136F.1_g062050 Hydrangea macrophylla HOM05D001377 ORTHO05D001221 5.0e-07 58.5 152 36.8
Cfa007959 Carpinus fangiana HOM05D001377 ORTHO05D001221 6.5e-07 58.2 156 34.6
Ciclev10013467m.g Citrus clementina HOM05D001377 ORTHO05D001221 6.5e-07 58.2 79 53.2
QL02p053039 Quercus lobata HOM05D001377 ORTHO05D001221 6.5e-07 58.2 149 36.9
MSTRG.2942 Avicennia marina HOM05D001377 ORTHO05D001221 8.5e-07 57.8 62 50.0
Nitab4.5_0003990g0020 Nicotiana tabacum HOM05D001377 ORTHO05D001221 1.1e-06 57.4 107 38.3
Nitab4.5_0000597g0010 Nicotiana tabacum HOM05D001377 ORTHO05D001221 1.4e-06 57.0 84 45.2
DCAR_007220 Daucus carota HOM05D001377 ORTHO05D001221 2.5e-06 56.2 162 34.6
Actinidia26292 Actinidia chinensis HOM05D001377 ORTHO05D001221 3.2e-06 55.8 100 36.0
COL.COLO4_16205 Corchorus olitorius HOM05D001377 ORTHO05D001221 4.2e-06 55.5 156 35.3
CiPaw.04G003600 Carya illinoinensis HOM05D001377 ORTHO05D001221 5.5e-06 55.1 157 36.3
Manes.01G107600 Manihot esculenta HOM05D001377 ORTHO05D001221 5.5e-06 55.1 116 39.7
CANSAT64G1104 Cannabis sativa HOM05D001377 ORTHO05D001221 7.2e-06 54.7 150 34.7
ECA238G3630 Erigeron canadensis HOM05D001377 ORTHO05D001221 9.4e-06 54.3 114 36.8
Hund13740 Selenicereus undatus HOM05D001377 ORTHO05D001221 9.4e-06 54.3 147 36.7


User provided reference genes

Program Settings