Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 5.3e-220 767.3 369 100.0
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 1.8e-204 715.7 366 93.2
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.4e-199 699.5 369 90.5
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 2.8e-197 691.8 366 90.2
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 6.3e-197 690.6 369 89.4
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 1.1e-196 689.9 369 89.2
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 1.1e-193 679.9 366 88.3
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 1.1e-193 679.9 366 88.3
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 4.3e-193 677.9 360 88.3
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.6e-192 676.0 371 88.4
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.8e-192 675.2 367 89.1
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.4e-191 672.9 368 86.4
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 4.0e-191 671.4 368 87.8
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 5.8e-190 667.5 365 86.3
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 9.8e-190 666.8 361 87.0
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 8.3e-189 663.7 354 87.0
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 1.4e-188 662.9 367 85.6
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 1.4e-188 662.9 358 87.4
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.4e-188 662.9 359 86.6
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 3.2e-188 661.8 362 86.5
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 3.2e-188 661.8 364 85.7
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 6.0e-187 657.5 358 86.0
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 6.0e-187 657.5 356 86.8
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 7.8e-187 657.1 358 85.5
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 1.7e-186 656.0 356 86.5
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 2.3e-186 655.6 358 85.8
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 3.0e-186 655.2 358 86.0
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 8.6e-186 653.7 364 85.2
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 3.3e-185 651.7 357 85.7
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 3.3e-185 651.7 357 85.2
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 4.3e-185 651.4 361 83.1
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 4.3e-185 651.4 357 86.6
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 9.5e-185 650.2 362 85.6
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 9.5e-185 650.2 358 84.6
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 9.5e-185 650.2 354 85.6
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.2e-184 649.8 357 85.7
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 1.6e-184 649.4 356 85.7
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 2.1e-184 649.0 360 86.1
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.8e-184 648.7 357 85.2
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.7e-184 647.9 357 85.2
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 4.7e-184 647.9 358 84.6
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 1.4e-183 646.4 356 85.4
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 2.3e-183 645.6 379 81.5
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 2.3e-183 645.6 357 84.6
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 4.0e-183 644.8 354 85.3
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 5.2e-183 644.4 357 83.2
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 8.9e-183 643.7 371 81.4
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 1.2e-182 643.3 356 84.3
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.2e-182 643.3 356 83.4
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.2e-182 643.3 356 83.4
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 1.5e-182 642.9 372 82.5
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.0e-182 642.5 356 85.1
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 2.0e-182 642.5 358 84.6
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 2.0e-182 642.5 358 83.5
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 2.6e-182 642.1 359 85.0
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 3.4e-182 641.7 356 83.7
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 4.4e-182 641.3 357 84.3
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 5.8e-182 641.0 358 83.5
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 9.8e-182 640.2 356 83.7
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.3e-181 639.8 361 82.8
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.9e-181 637.9 361 82.8
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 6.4e-181 637.5 357 84.0
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 1.1e-180 636.7 356 83.4
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.1e-180 636.7 357 84.0
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.1e-180 636.7 370 81.4
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 3.2e-180 635.2 357 83.2
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 5.4e-180 634.4 354 83.6
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 9.2e-180 633.6 360 81.9
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 9.2e-180 633.6 356 85.1
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.2e-179 633.3 359 83.8
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 1.6e-179 632.9 353 83.3
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 2.1e-179 632.5 353 82.4
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 2.3e-178 629.0 353 83.6
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 3.0e-178 628.6 362 82.0
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.0e-178 628.6 357 82.9
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 8.6e-178 627.1 358 82.7
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.9e-177 625.9 357 83.2
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 2.5e-177 625.5 354 83.1
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 3.3e-177 625.2 359 81.6
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 1.2e-176 623.2 357 81.5
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 2.1e-176 622.5 367 79.8
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.1e-175 620.2 370 80.8
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 1.1e-175 620.2 366 80.3
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 2.3e-175 619.0 365 80.0
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 4.0e-175 618.2 354 81.6
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 1.5e-174 616.3 352 82.1
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.4e-174 615.1 369 79.9
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 7.5e-174 614.0 373 76.9
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 9.9e-174 613.6 359 80.2
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 2.2e-173 612.5 367 80.1
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 2.4e-172 609.0 377 77.5
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.4e-172 607.8 368 79.1
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 9.2e-172 607.1 357 77.9
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.6e-171 606.3 341 83.0
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.5e-171 605.1 358 79.6
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 1.3e-170 603.2 352 82.1
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 2.3e-170 602.4 370 78.4
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 8.6e-170 600.5 378 76.5
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 4.7e-168 594.7 358 78.5
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 4.0e-167 591.7 376 75.5
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 8.9e-167 590.5 365 77.8
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 3.4e-166 588.6 360 76.7
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 2.4e-164 582.4 358 74.9
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 4.2e-164 581.6 358 78.2
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 1.2e-163 580.1 347 79.3
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.6e-163 579.7 351 77.8
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.0e-162 577.0 362 74.6
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 2.3e-162 575.9 362 74.6
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 7.3e-161 570.9 358 76.8
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.4e-159 565.8 357 76.8
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.2e-158 563.5 354 76.0
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.4e-158 561.6 357 75.9
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 7.6e-158 560.8 357 75.4
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.3e-157 560.1 359 75.5
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 1.9e-156 556.2 295 88.1
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.9e-156 556.2 347 75.5
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.7e-155 552.4 350 73.7
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 6.6e-154 547.7 356 71.6
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 8.7e-154 547.4 365 74.2
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 3.6e-152 542.0 349 71.9
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 3.6e-152 542.0 354 73.7
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.8e-151 539.7 353 70.5
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 4.0e-151 538.5 431 63.6
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 9.9e-150 533.9 371 69.3
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.9e-149 532.3 331 72.5
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 2.4e-148 529.3 361 71.2
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.0e-146 523.9 279 88.2
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.2e-140 502.3 363 65.0
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.7e-136 488.8 290 78.6
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 4.5e-134 481.9 360 67.2
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 1.0e-133 480.7 336 67.0
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 9.3e-132 474.2 239 92.5
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.3e-130 470.3 355 62.0
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 8.2e-128 461.1 717 40.0
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.4e-127 460.3 336 62.2
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.1e-124 450.7 316 66.1
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 5.9e-118 428.3 266 75.2
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.3e-109 400.6 236 78.8
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.1e-108 397.5 348 54.3
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.3e-101 374.0 334 58.4
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 7.5e-97 358.2 220 76.4
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 9.1e-95 351.3 331 54.7
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 3.5e-94 349.4 251 64.1
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 4.5e-86 322.4 202 76.2
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.5e-84 317.4 289 59.2
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 3.4e-49 199.9 142 70.4
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 6.4e-48 195.7 100 94.0
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 2.1e-46 190.7 125 76.8
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 3.5e-46 189.9 125 76.0
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 4.6e-46 189.5 117 82.1
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 4.6e-46 189.5 125 76.0
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.1e-43 180.6 113 73.5
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 3.6e-43 179.9 124 72.6
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.1e-42 178.3 97 89.7
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 5.3e-42 176.0 171 51.5
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 3.2e-39 166.8 133 63.2
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.3e-37 160.6 98 74.5
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 4.9e-32 142.9 123 60.2
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.2e-31 139.8 111 60.4
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 4.5e-25 119.8 69 82.6
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.2e-24 117.5 65 84.6
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 8.4e-24 115.5 71 77.5
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 4.2e-23 113.2 64 84.4
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 9.6e-20 102.1 69 71.0
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.4e-18 98.2 61 75.4
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 4.5e-17 93.2 84 57.1
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.1e-14 84.3 124 44.4
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 6.7e-13 79.3 49 69.4
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 2.5e-12 77.4 67 56.7
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 9.0e-10 68.9 41 80.5
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 1.6e-06 58.2 31 90.3


User provided reference genes

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