Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 5.6e-92 340.9 168 100.0
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 2.8e-59 232.3 159 73.0
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 7.7e-57 224.2 155 73.5
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 2.4e-50 202.6 157 66.9
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 1.3e-48 196.8 163 63.2
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 2.1e-46 189.5 168 59.5
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 9.7e-44 180.6 148 61.5
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 5.3e-42 174.9 143 58.0
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 1.6e-41 173.3 146 60.3
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 1.6e-41 173.3 146 60.3
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 5.9e-41 171.4 147 61.2
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 2.9e-40 169.1 167 53.3
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 6.5e-40 167.9 128 64.1
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 1.9e-39 166.4 135 61.5
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 3.2e-39 165.6 133 60.9
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 5.5e-39 164.9 141 56.0
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 1.6e-38 163.3 151 57.6
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 2.1e-38 162.9 150 56.7
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 3.6e-38 162.2 152 54.6
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 3.6e-38 162.2 151 53.6
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 4.7e-38 161.8 147 55.8
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 6.1e-38 161.4 147 56.5
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.4e-37 160.2 154 51.3
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 3.0e-37 159.1 150 54.7
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 5.2e-37 158.3 134 58.2
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 6.7e-37 157.9 145 56.6
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 8.8e-37 157.5 154 50.0
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 8.8e-37 157.5 154 50.0
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 8.8e-37 157.5 142 55.6
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 8.8e-37 157.5 143 58.0
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 2.0e-36 156.4 141 57.4
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 3.3e-36 155.6 130 58.5
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 3.3e-36 155.6 132 59.8
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 4.4e-36 155.2 157 52.9
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 5.7e-36 154.8 150 52.7
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 5.7e-36 154.8 143 54.5
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 9.7e-36 154.1 131 58.0
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 2.2e-35 152.9 131 58.0
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 2.8e-35 152.5 142 56.3
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 6.3e-35 151.4 149 54.4
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 6.3e-35 151.4 128 57.8
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 1.1e-34 150.6 155 52.3
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 1.1e-34 150.6 144 53.5
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.4e-34 150.2 154 48.7
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 1.8e-34 149.8 132 56.1
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 3.1e-34 149.1 141 57.4
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 4.1e-34 148.7 139 58.3
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 5.3e-34 148.3 145 56.6
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 5.3e-34 148.3 125 58.4
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 9.1e-34 147.5 156 51.3
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 1.2e-33 147.1 148 49.3
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 1.2e-33 147.1 161 50.9
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 1.2e-33 147.1 152 55.9
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 1.6e-33 146.7 152 51.3
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 1.6e-33 146.7 152 55.9
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 3.5e-33 145.6 129 60.5
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 3.5e-33 145.6 125 57.6
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 4.5e-33 145.2 145 53.8
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 5.9e-33 144.8 131 52.7
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 7.7e-33 144.4 144 52.8
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 7.7e-33 144.4 149 49.0
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 1.7e-32 143.3 159 49.1
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 1.7e-32 143.3 130 56.2
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 3.8e-32 142.1 148 52.7
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 1.1e-31 140.6 144 51.4
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 1.5e-31 140.2 144 51.4
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 1.5e-31 140.2 154 49.4
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 2.5e-31 139.4 140 51.4
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 2.5e-31 139.4 140 51.4
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 2.5e-31 139.4 140 52.1
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 2.5e-31 139.4 144 51.4
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 2.5e-31 139.4 144 51.4
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 3.2e-31 139.0 140 52.1
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 5.5e-31 138.3 127 52.8
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 7.2e-31 137.9 146 51.4
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 3.6e-30 135.6 161 49.1
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 1.0e-29 134.0 145 49.0
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 1.8e-29 133.3 140 50.0
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 4.0e-29 132.1 144 50.0
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 4.0e-29 132.1 148 47.3
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.5e-28 130.2 151 49.7
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 2.0e-28 129.8 157 45.2
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 1.7e-27 126.7 131 48.1
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 4.8e-27 125.2 138 49.3
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 1.1e-26 124.0 133 48.9
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 4.1e-26 122.1 142 45.1
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 4.1e-26 122.1 130 53.1
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 9.1e-26 120.9 131 51.1
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 9.1e-26 120.9 131 54.2
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 1.2e-25 120.6 150 46.0
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 2.0e-25 119.8 141 48.9
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 3.5e-25 119.0 124 49.2
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 1.1e-23 114.0 132 44.7
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 1.9e-23 113.2 130 46.2
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 6.1e-22 108.2 137 44.5
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 1.8e-21 106.7 151 44.4
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 3.0e-21 105.9 130 44.6
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 1.0e-16 90.9 114 43.9
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 2.8e-14 82.8 93 46.2
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 3.7e-11 72.4 143 31.5
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 1.8e-10 70.1 54 57.4
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 2.0e-09 66.6 94 41.5
ECA238G4657 Erigeron canadensis HOM05D006295 ORTHO05D008061 3.9e-08 62.4 83 37.3
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 4.3e-07 58.9 68 44.1


User provided reference genes

Program Settings