Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 1.2e-152 543.1 274 100.0
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 3.0e-135 485.3 277 88.8
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 6.5e-130 467.6 278 86.0
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 2.8e-125 452.2 282 85.1
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 1.7e-122 443.0 277 80.9
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 1.4e-121 439.9 279 81.0
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 9.4e-121 437.2 279 80.6
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.8e-119 433.0 279 80.3
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 8.8e-119 430.6 279 78.5
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 5.7e-118 427.9 262 82.8
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 4.8e-117 424.9 273 81.0
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 1.0e-114 417.2 278 78.8
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 5.0e-114 414.8 282 77.3
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 1.4e-111 406.8 274 79.9
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 6.7e-111 404.4 277 76.2
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 8.8e-111 404.1 242 84.7
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 1.3e-106 390.2 263 76.0
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 6.5e-106 387.9 271 74.5
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 8.5e-106 387.5 258 77.5
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 2.1e-104 382.9 266 75.2
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 3.6e-104 382.1 261 77.0
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 3.0e-103 379.0 289 71.3
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 4.0e-103 378.6 267 75.7
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 6.8e-103 377.9 277 72.9
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 8.8e-103 377.5 280 72.1
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 1.5e-102 376.7 286 72.0
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 3.4e-102 375.6 232 81.9
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 4.4e-102 375.2 227 83.3
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 5.7e-102 374.8 213 87.8
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 5.7e-102 374.8 263 76.0
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 5.7e-102 374.8 284 70.8
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 9.8e-102 374.0 241 78.8
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 1.3e-101 373.6 275 70.9
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 1.7e-101 373.2 277 71.1
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 2.2e-101 372.9 262 75.2
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 2.8e-101 372.5 255 75.7
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 2.8e-101 372.5 284 70.4
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 2.8e-101 372.5 226 82.3
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 4.8e-101 371.7 277 70.8
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 4.8e-101 371.7 283 69.6
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 8.3e-101 370.9 281 70.1
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 8.3e-101 370.9 257 73.2
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.1e-100 370.5 250 76.8
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 1.4e-100 370.2 268 71.3
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 1.4e-100 370.2 257 74.3
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 2.4e-100 369.4 224 83.0
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 3.1e-100 369.0 198 90.4
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 5.4e-100 368.2 273 73.3
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 5.4e-100 368.2 227 81.9
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 7.0e-100 367.9 250 77.2
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 7.0e-100 367.9 198 91.4
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 7.0e-100 367.9 223 82.5
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 9.1e-100 367.5 251 76.1
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 9.1e-100 367.5 235 78.7
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 9.1e-100 367.5 270 73.7
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 1.6e-99 366.7 226 81.4
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 1.6e-99 366.7 244 77.9
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 2.0e-99 366.3 208 87.5
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 2.0e-99 366.3 209 87.1
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 2.7e-99 365.9 262 73.7
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 3.5e-99 365.5 285 69.5
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 4.5e-99 365.2 223 83.0
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 4.5e-99 365.2 285 69.5
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 5.9e-99 364.8 232 80.6
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 7.7e-99 364.4 259 73.0
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 1.0e-98 364.0 224 81.2
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 1.0e-98 364.0 267 71.2
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.0e-98 364.0 271 72.0
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 1.0e-98 364.0 262 74.4
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 1.0e-98 364.0 210 84.8
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 1.3e-98 363.6 223 83.4
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 1.3e-98 363.6 227 81.1
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 2.3e-98 362.8 224 81.7
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 2.3e-98 362.8 267 71.9
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 2.3e-98 362.8 269 71.7
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 2.9e-98 362.5 255 74.9
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 3.8e-98 362.1 225 80.4
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 3.8e-98 362.1 210 83.8
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 6.5e-98 361.3 253 74.3
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 8.6e-98 360.9 268 71.3
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 1.1e-97 360.5 224 80.4
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 1.9e-97 359.8 224 80.8
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 3.2e-97 359.0 252 75.0
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 5.5e-97 358.2 227 77.5
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 5.5e-97 358.2 235 77.0
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 7.2e-97 357.8 224 80.4
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 7.2e-97 357.8 207 84.5
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 9.5e-97 357.5 223 80.3
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 9.5e-97 357.5 223 80.3
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 3.6e-96 355.5 276 68.1
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 4.7e-96 355.1 271 69.7
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 6.1e-96 354.8 300 65.7
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 1.0e-95 354.0 218 82.1
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 1.4e-95 353.6 252 71.0
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.8e-95 353.2 221 79.2
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 1.8e-95 353.2 264 69.7
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 3.0e-95 352.4 238 74.8
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 4.0e-95 352.1 270 68.1
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 5.2e-95 351.7 258 72.1
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 8.8e-95 350.9 257 72.4
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 3.4e-94 349.0 235 75.7
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 3.4e-94 349.0 250 70.8
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 5.7e-94 348.2 257 70.0
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 2.2e-93 346.3 274 69.0
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 2.8e-93 345.9 256 71.5
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 3.7e-93 345.5 270 66.7
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 3.7e-93 345.5 206 83.0
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.4e-92 343.6 298 62.1
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 5.4e-92 341.7 213 79.3
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 5.4e-92 341.7 220 77.3
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 9.2e-92 340.9 199 84.4
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 2.7e-91 339.3 198 82.3
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 1.3e-90 337.0 198 82.8
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 2.3e-90 336.3 275 67.6
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 1.2e-88 330.5 269 67.3
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 5.7e-86 321.6 287 64.8
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 3.7e-85 318.9 261 69.3
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 1.4e-84 317.0 250 67.6
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 9.2e-84 314.3 166 91.0
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 2.7e-83 312.8 206 76.2
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 1.0e-82 310.8 196 77.6
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 6.6e-82 308.1 196 78.1
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.1e-80 303.1 318 55.7
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 6.8e-79 298.1 248 64.5
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.2e-78 297.4 238 68.1
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 1.5e-78 297.0 166 87.3
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 7.5e-78 294.7 195 75.4
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 1.7e-77 293.5 213 70.0
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 1.1e-76 290.8 199 70.9
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 2.4e-76 289.7 180 81.1
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 1.6e-75 287.0 155 87.1
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 6.6e-74 281.6 174 78.7
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 1.6e-72 276.9 192 74.0
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.1e-72 276.6 287 58.2
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 8.1e-72 274.6 278 56.8
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 3.4e-70 269.2 226 64.6
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 9.9e-70 267.7 151 84.8
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 8.3e-69 264.6 148 84.5
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 4.1e-68 262.3 198 68.2
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 7.8e-67 258.1 159 81.8
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 1.3e-66 257.3 253 57.3
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 2.3e-66 256.5 204 68.6
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 3.3e-65 252.7 203 67.5
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 3.6e-64 249.2 186 72.6
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.5e-62 243.8 149 81.2
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 2.9e-61 239.6 217 62.2
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 1.9e-60 236.9 258 53.9
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 1.1e-55 221.1 137 75.2
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 6.9e-55 218.4 245 43.7
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 1.7e-50 203.8 174 63.2
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 6.9e-47 191.8 129 75.2
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 9.9e-46 188.0 344 39.5
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 2.5e-41 173.3 208 50.0
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 5.8e-38 162.2 188 44.1
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 2.1e-35 153.7 211 40.3
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 4.3e-33 146.0 225 39.6
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.2e-30 137.9 84 78.6
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 2.1e-27 127.1 120 62.5
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 1.2e-22 111.3 62 82.3
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 5.9e-22 109.0 62 80.6
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 6.1e-19 99.0 59 81.4
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.7e-13 80.9 84 54.8
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.8e-13 79.7 153 43.1
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 3.2e-12 76.6 118 41.5
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 2.7e-11 73.6 50 76.0
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 1.0e-10 71.6 40 87.5
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.4e-10 71.2 36 88.9
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 2.3e-10 70.5 40 80.0
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 1.7e-08 64.3 32 90.6
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.1e-07 61.6 42 69.0
CSS0040239 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 5.3e-07 59.3 34 79.4
Rhsim08G0128300 Rhododendron simsii HOM05D004138 ORTHO05D339665 1.2e-06 58.2 31 83.9


User provided reference genes

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