Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 3.8e-148 528.1 259 100.0
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 7.2e-131 470.7 262 90.1
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.0e-129 466.8 264 88.3
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 2.3e-124 449.1 253 87.0
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 7.3e-123 444.1 280 81.8
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.2e-119 432.6 250 85.2
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.0e-116 423.7 259 81.1
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.0e-116 423.7 251 84.5
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.7e-116 422.9 250 82.8
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 8.9e-113 410.6 250 79.6
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 8.9e-113 410.6 254 78.0
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 4.4e-112 408.3 250 78.8
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 9.2e-110 400.6 250 78.4
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 4.6e-109 398.3 253 78.3
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.3e-108 396.7 250 78.8
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 3.0e-108 395.6 251 77.3
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 3.9e-108 395.2 251 76.5
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 6.6e-108 394.4 253 77.9
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 8.6e-108 394.0 262 75.6
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.1e-107 393.7 250 76.8
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 7.3e-107 391.0 251 76.5
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 2.1e-106 389.4 244 76.2
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 2.1e-106 389.4 246 78.9
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 2.1e-106 389.4 248 77.8
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 2.8e-106 389.0 248 77.0
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 2.8e-106 389.0 247 76.1
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 6.2e-106 387.9 247 76.1
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.1e-105 387.1 255 74.5
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 1.1e-105 387.1 255 75.3
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.1e-105 387.1 251 75.7
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.8e-105 386.3 247 78.9
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 4.0e-105 385.2 255 74.1
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.2e-104 383.6 256 76.2
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 5.8e-104 381.3 249 74.7
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 1.3e-103 380.2 245 75.1
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.7e-103 379.8 239 77.4
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 2.2e-103 379.4 239 77.4
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.2e-103 379.4 239 77.4
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 2.2e-103 379.4 244 75.8
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.9e-103 379.0 246 77.2
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 3.7e-103 378.6 251 74.1
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 6.4e-103 377.9 247 76.1
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.1e-102 377.1 251 73.7
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.4e-102 376.7 244 75.0
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 1.9e-102 376.3 234 76.9
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 2.4e-102 375.9 259 73.0
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 3.2e-102 375.6 253 73.9
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 5.4e-102 374.8 218 83.9
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 7.1e-102 374.4 233 78.1
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 9.2e-102 374.0 243 77.0
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.2e-101 373.6 274 71.5
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.6e-101 373.2 254 73.6
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 2.7e-101 372.5 251 74.5
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 2.7e-101 372.5 243 74.1
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 7.8e-101 370.9 251 75.3
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.3e-100 370.2 250 74.0
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.7e-100 369.8 247 73.3
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 2.3e-100 369.4 260 70.4
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 2.3e-100 369.4 240 74.2
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.0e-100 369.0 275 70.9
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 3.9e-100 368.6 261 71.6
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 5.1e-100 368.2 264 70.1
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 5.1e-100 368.2 251 75.7
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 5.1e-100 368.2 243 74.5
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 1.1e-99 367.1 247 72.5
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 5.6e-99 364.8 249 72.7
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 7.3e-99 364.4 254 71.3
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 9.5e-99 364.0 253 71.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.2e-98 363.6 249 72.3
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 3.6e-98 362.1 250 71.6
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 3.6e-98 362.1 254 70.9
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.4e-97 360.1 257 71.2
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.4e-97 360.1 253 71.1
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.8e-97 359.8 239 72.4
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.8e-97 359.8 255 69.8
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 3.1e-97 359.0 244 72.5
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 4.0e-97 358.6 252 71.0
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 8.9e-97 357.5 260 68.5
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 2.0e-96 356.3 256 69.1
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 2.0e-96 356.3 256 69.1
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.3e-95 353.6 229 74.2
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.4e-94 349.4 315 59.7
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 4.6e-93 345.1 210 80.5
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 6.0e-93 344.7 230 68.7
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 7.8e-93 344.4 241 71.0
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 3.0e-92 342.4 243 72.4
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 3.0e-92 342.4 234 71.8
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 5.1e-92 341.7 209 78.5
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 3.3e-91 339.0 219 74.4
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.3e-91 339.0 244 66.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 7.3e-91 337.8 300 59.7
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 1.2e-90 337.0 208 78.4
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 2.8e-90 335.9 245 67.8
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 2.4e-89 332.8 208 76.4
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 9.0e-89 330.9 214 74.3
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 2.0e-88 329.7 242 68.2
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 5.8e-88 328.2 207 76.8
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.7e-87 326.6 211 76.3
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 2.3e-84 316.2 330 55.5
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.5e-83 313.5 198 79.8
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 3.3e-83 312.4 198 75.8
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 4.6e-77 292.0 198 68.7
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.5e-70 269.6 225 59.6
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.3e-68 263.8 174 74.7
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 3.0e-68 262.7 237 55.3
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 5.6e-67 258.5 165 80.0
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 7.9e-61 238.0 250 48.4
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 3.9e-60 235.7 154 72.1
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 2.5e-59 233.0 223 54.7
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 5.5e-54 215.3 250 46.8
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 3.3e-51 206.1 134 76.1
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.5e-48 197.2 135 71.9
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 3.2e-46 189.5 144 69.4
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 9.4e-46 188.0 144 68.8
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 1.6e-45 187.2 144 68.8
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 1.4e-44 184.1 96 95.8
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 2.2e-42 176.8 115 76.5
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 8.2e-42 174.9 105 75.2
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 5.3e-41 172.2 171 54.4
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 8.0e-37 158.3 121 66.9
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 6.5e-31 138.7 79 83.5
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 6.5e-31 138.7 95 70.5
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.7e-26 124.0 82 69.5
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.6e-24 117.5 116 56.9
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 1.4e-20 104.4 47 97.9
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 6.8e-12 75.5 110 45.5
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.5e-11 74.3 168 29.2
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 5.7e-11 72.4 110 44.5
Lsat_1_v5_gn_2_43661 Lactuca sativa HOM05D005955 ORTHO05D033925 1.9e-06 57.4 45 66.7
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 3.3e-06 56.6 35 74.3


User provided reference genes

Program Settings