Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g194920 Pisum sativum HOM05D000003 ORTHO05D000006 1.1e-86 323.2 156 100.0
TPR.G7851 Trifolium pratense HOM05D000003 ORTHO05D000007 2.2e-42 176.0 157 53.5
TPR.G20906 Trifolium pratense HOM05D000003 ORTHO05D000006 1.9e-38 162.9 131 55.0
Psat5g046160 Pisum sativum HOM05D000003 ORTHO05D000006 1.0e-23 114.0 110 47.3
Psat4g187720 Pisum sativum HOM05D000003 ORTHO05D000006 2.9e-18 95.9 116 38.8
Psat0s1357g0040 Pisum sativum HOM05D000003 ORTHO05D000006 5.0e-18 95.1 116 38.8
Psat2g089560 Pisum sativum HOM05D000003 ORTHO05D000004 5.0e-18 95.1 116 38.8
Psat2g100080 Pisum sativum HOM05D000003 ORTHO05D000006 5.0e-18 95.1 116 38.8
Psat5g282240 Pisum sativum HOM05D000003 ORTHO05D000004 5.0e-18 95.1 116 38.8
TPR.G8630 Trifolium pratense HOM05D000003 ORTHO05D000004 6.7e-15 84.7 127 35.4
TPR.G35752 Trifolium pratense HOM05D000003 ORTHO05D010993 8.8e-15 84.3 117 37.6
Psat2g167600 Pisum sativum HOM05D000003 ORTHO05D000006 1.1e-14 84.0 116 37.1
Peaxi162Scf00855g00029 Petunia axillaris HOM05D000003 ORTHO05D000006 1.5e-14 83.6 137 35.0
TPR.G15815 Trifolium pratense HOM05D000024 ORTHO05D000006 1.5e-14 83.6 117 35.9
Psat1g220680 Pisum sativum HOM05D000003 ORTHO05D000004 7.4e-14 81.3 116 33.6
Psat7g191840 Pisum sativum HOM05D000003 ORTHO05D000006 1.7e-13 80.1 116 35.3
TPR.G1529 Trifolium pratense HOM05D000003 ORTHO05D000004 2.8e-13 79.3 127 34.6
Psat6g217360 Pisum sativum HOM05D000024 ORTHO05D000006 3.7e-13 79.0 116 34.5
Psat6g224760 Pisum sativum HOM05D000003 ORTHO05D000004 1.4e-12 77.0 164 32.9
TPR.G23566 Trifolium pratense HOM05D000003 ORTHO05D000007 5.3e-12 75.1 112 35.7
Psat0s1717g0040 Pisum sativum HOM05D000003 ORTHO05D000006 7.0e-12 74.7 117 33.3
TPR.G27375 Trifolium pratense HOM05D000003 ORTHO05D000004 7.0e-12 74.7 102 36.3
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 2.0e-11 73.2 126 31.0
Psat1g185560 Pisum sativum HOM05D000003 ORTHO05D000004 1.7e-10 70.1 101 31.7
Peaxi162Scf00104g00310 Petunia axillaris HOM05D000003 ORTHO05D000006 8.5e-10 67.8 149 31.5
CAN.G79.73 Capsicum annuum HOM05D000003 ORTHO05D000006 1.5e-09 67.0 118 29.7
TPR.G13276 Trifolium pratense HOM05D000003 ORTHO05D000004 1.5e-09 67.0 66 50.0
Sopen00g009650 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-09 65.9 116 29.3
Nitab4.5_0000063g0320 Nicotiana tabacum HOM05D000003 ORTHO05D000006 4.2e-09 65.5 116 28.4
Sopen00g011080 Solanum pennellii HOM05D000003 ORTHO05D000006 4.2e-09 65.5 117 34.2
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 5.5e-09 65.1 90 40.0
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 7.2e-09 64.7 119 32.8
BolC1t03151H Brassica oleracea HOM05D000003 ORTHO05D000006 9.4e-09 64.3 115 30.4
Nitab4.5_0002980g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 9.4e-09 64.3 109 30.3
Sopen00g009820 Solanum pennellii HOM05D000003 ORTHO05D000004 9.4e-09 64.3 146 28.1
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 9.4e-09 64.3 89 37.1
Sopen00g012810 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-08 63.9 114 30.7
Peaxi162Scf00002g00043 Petunia axillaris HOM05D000003 ORTHO05D000006 1.6e-08 63.5 111 28.8
Peaxi162Scf00296g00055 Petunia axillaris HOM05D000024 ORTHO05D000006 1.6e-08 63.5 134 28.4
Peaxi162Scf03354g00001 Petunia axillaris HOM05D000003 ORTHO05D000006 1.6e-08 63.5 111 28.8
CAN.G248.7 Capsicum annuum HOM05D000003 ORTHO05D000006 2.1e-08 63.2 85 31.8
Psat5g288520 Pisum sativum HOM05D000003 ORTHO05D000006 2.1e-08 63.2 130 27.7
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 2.1e-08 63.2 90 38.9
THA.LOC104814739 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.1e-08 63.2 101 32.7
Atru.chr9.1174 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-08 62.8 124 27.4
Psat0s234g0040 Pisum sativum HOM05D000003 ORTHO05D000006 3.6e-08 62.4 117 30.8
Sopen00g005320 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-08 62.4 96 31.2
Sopen07g016880 Solanum pennellii HOM05D000003 ORTHO05D000006 4.7e-08 62.0 115 28.7
PSO541G4805 Papaver somniferum HOM05D000003 ORTHO05D000004 6.1e-08 61.6 118 28.0
BcaC03g18383 Brassica carinata HOM05D000003 ORTHO05D000006 8.0e-08 61.2 76 36.8
CANSAT56G0694 Cannabis sativa HOM05D000003 ORTHO05D000006 8.0e-08 61.2 118 28.8
Dinv29992 Davidia involucrata HOM05D000024 ORTHO05D000006 8.0e-08 61.2 123 26.8
Aqoxy1G03910 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.0e-07 60.8 139 27.3
Aqoxy2G02483 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 1.0e-07 60.8 139 28.8
Nitab4.5_0001729g0050 Nicotiana tabacum HOM05D010714 ORTHO05D000006 1.0e-07 60.8 109 29.4
Peaxi162Scf00067g00113 Petunia axillaris HOM05D000003 ORTHO05D000006 1.0e-07 60.8 116 27.6
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-07 60.8 90 37.8
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.0e-07 60.8 90 37.8
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 1.4e-07 60.5 102 32.4
Psat7g236200 Pisum sativum HOM05D000003 ORTHO05D000004 1.4e-07 60.5 99 30.3
Sopen05g024150 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-07 60.5 116 26.7
Nitab4.5_0008260g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.8e-07 60.1 139 25.9
BolC2t12521H Brassica oleracea HOM05D000003 ORTHO05D000006 2.3e-07 59.7 76 36.8
CANSAT78G0838 Cannabis sativa HOM05D000003 ORTHO05D000006 2.3e-07 59.7 139 30.2
PSO357G0412 Papaver somniferum HOM05D000003 ORTHO05D000006 2.3e-07 59.7 132 28.8
SHI36509 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-07 59.7 131 28.2
Sopen00g008390 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-07 59.7 109 30.3
Peaxi162Scf00164g00114 Petunia axillaris HOM05D000003 ORTHO05D000007 3.0e-07 59.3 117 27.4
Psat7g051480 Pisum sativum HOM05D000003 ORTHO05D000006 3.0e-07 59.3 80 36.2
CSS0044337 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-07 58.9 89 34.8
SHI49955 Sapria himalayana HOM05D000024 ORTHO05D000006 4.0e-07 58.9 118 31.4
Sopen04g011470 Solanum pennellii HOM05D000003 ORTHO05D000006 4.0e-07 58.9 94 35.1
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-07 58.5 117 29.1
Sopen09g016100 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-07 58.5 101 31.7
C07p21540 Brassica napus HOM05D000003 ORTHO05D000006 6.7e-07 58.2 111 31.5
BraA10t44622Z Brassica rapa HOM05D000003 ORTHO05D000006 6.7e-07 58.2 110 27.3
CANSAT80G2730 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-07 58.2 121 29.8
CAN.G354.33 Capsicum annuum HOM05D000003 ORTHO05D000006 6.7e-07 58.2 114 30.7
BolC4t24666H Brassica oleracea HOM05D000003 ORTHO05D000006 8.8e-07 57.8 101 25.7
CAN.G213.17 Capsicum annuum HOM05D000003 ORTHO05D000006 8.8e-07 57.8 116 25.0
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.8e-07 57.8 90 32.2
SHI26858 Sapria himalayana HOM05D000024 ORTHO05D000006 8.8e-07 57.8 118 29.7
SHI33071 Sapria himalayana HOM05D000024 ORTHO05D000006 8.8e-07 57.8 118 31.4
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 8.8e-07 57.8 117 31.6
Aa31sc25G170 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-06 57.4 138 26.1
BcaC06g35997 Brassica carinata HOM05D000003 ORTHO05D003342 1.2e-06 57.4 98 34.7
C04p52240 Brassica napus HOM05D000003 ORTHO05D000006 1.2e-06 57.4 104 28.8
CAN.G107.29 Capsicum annuum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 96 30.2
CAN.G1158.7 Capsicum annuum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 126 29.4
PSO339G6097 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-06 57.4 119 31.9
SHI19833 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.4 118 28.8
SHI34156 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.4 118 28.8
SHI46101 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.4 118 31.4
SHI50520 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.4 98 30.6
Sopen01g024500 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-06 57.4 127 28.3
THA.LOC104825777 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 1.2e-06 57.4 96 31.2
BcaB01g03209 Brassica carinata HOM05D000003 ORTHO05D000006 1.5e-06 57.0 136 26.5
Psat4g117560 Pisum sativum HOM05D000003 ORTHO05D000004 1.5e-06 57.0 78 34.6
SHI35155 Sapria himalayana HOM05D000024 ORTHO05D000006 1.5e-06 57.0 118 29.7
Aa31LG3G5250 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 56.6 88 28.4
Aa31LG7G10780 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 56.6 102 28.4
BolC1t03234H Brassica oleracea HOM05D000003 ORTHO05D000006 2.0e-06 56.6 88 35.2
Nitab4.5_0000749g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000006 2.0e-06 56.6 71 36.6
PSO339G5630 Papaver somniferum HOM05D000003 ORTHO05D000006 2.0e-06 56.6 119 27.7
PSO675G2147 Papaver somniferum HOM05D000003 ORTHO05D000006 2.0e-06 56.6 119 31.1
SHI14065 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.6 132 28.8
SHI26156 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.6 123 28.5
SHI31717 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.6 118 29.7
SHI45415 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.6 118 31.4
SHI45531 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.6 118 31.4
Atru.chr13.1165 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-06 56.2 101 32.7
SHI34784 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 56.2 126 28.6
SHI38864 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 56.2 118 29.7
SHI53559 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 56.2 118 30.5
Atru.chr10.299 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 97 30.9
Atru.chr4.30 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 108 29.6
BcaB06g27123 Brassica carinata HOM05D000003 ORTHO05D000006 3.3e-06 55.8 105 27.6
Nitab4.5_0006265g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.3e-06 55.8 87 32.2
Nitab4.5_0008412g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.3e-06 55.8 115 31.3
PSO063G3357 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-06 55.8 119 29.4
PSO063G4331 Papaver somniferum HOM05D000003 ORTHO05D000651 3.3e-06 55.8 119 30.3
PSO384G2976 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-06 55.8 117 29.9
SHI15903 Sapria himalayana HOM05D000024 ORTHO05D000006 3.3e-06 55.8 103 34.0
SHI32987 Sapria himalayana HOM05D000415 ORTHO05D001916 3.3e-06 55.8 89 34.8
SHI33059 Sapria himalayana HOM05D000024 ORTHO05D000006 3.3e-06 55.8 120 30.0
Atru.chr7.397 Acer truncatum HOM05D000003 ORTHO05D000006 4.4e-06 55.5 107 32.7
Aqoxy2G01321 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.4e-06 55.5 147 26.5
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 4.4e-06 55.5 114 29.8
PSO832G1627 Papaver somniferum HOM05D000003 ORTHO05D000004 4.4e-06 55.5 138 24.6
SHI19747 Sapria himalayana HOM05D000024 ORTHO05D000006 4.4e-06 55.5 118 30.5
SHI47867 Sapria himalayana HOM05D000024 ORTHO05D000006 4.4e-06 55.5 118 29.7
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 4.4e-06 55.5 89 31.5
Atru.chr10.1536 Acer truncatum HOM05D000003 ORTHO05D000167 5.7e-06 55.1 109 31.2
BolC5t30983H Brassica oleracea HOM05D000003 ORTHO05D000006 5.7e-06 55.1 113 26.5
CANSAT01G2554 Cannabis sativa HOM05D000003 ORTHO05D000006 5.7e-06 55.1 103 27.2
Nitab4.5_0004062g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 5.7e-06 55.1 101 31.7
PSO447G0142 Papaver somniferum HOM05D000003 ORTHO05D000004 5.7e-06 55.1 75 36.0
SHI40349 Sapria himalayana HOM05D000024 ORTHO05D000006 5.7e-06 55.1 118 28.8
SHI46983 Sapria himalayana HOM05D000024 ORTHO05D000006 5.7e-06 55.1 98 32.7
SHI49000 Sapria himalayana HOM05D000024 ORTHO05D000006 5.7e-06 55.1 126 28.6
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 7.5e-06 54.7 138 24.6
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 7.5e-06 54.7 119 26.1
CANSAT54G2029 Cannabis sativa HOM05D000003 ORTHO05D000006 7.5e-06 54.7 88 33.0
FvH4_4g21422 Fragaria vesca HOM05D000003 ORTHO05D000006 7.5e-06 54.7 135 28.1
SHI41009 Sapria himalayana HOM05D000024 ORTHO05D000006 7.5e-06 54.7 98 30.6
SHI51424 Sapria himalayana HOM05D000024 ORTHO05D000006 7.5e-06 54.7 118 30.5
SHI54926 Sapria himalayana HOM05D000024 ORTHO05D000006 7.5e-06 54.7 94 34.0
THA.LOC104825266 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 7.5e-06 54.7 95 32.6
Aqoxy2G01976 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 9.7e-06 54.3 117 26.5
Aqoxy7G02314 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 9.7e-06 54.3 136 25.0
CANSAT35G1349 Cannabis sativa HOM05D000003 ORTHO05D000006 9.7e-06 54.3 96 30.2
CAN.G1197.2 Capsicum annuum HOM05D000003 ORTHO05D000006 9.7e-06 54.3 110 30.9
Nitab4.5_0000400g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 9.7e-06 54.3 116 26.7
SHI31021 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-06 54.3 98 31.6
SHI38327 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-06 54.3 98 31.6
SHI46596 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-06 54.3 98 33.7


User provided reference genes

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