Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 3.0e-96 355.1 178 100.0
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 7.1e-77 290.8 165 86.1
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 4.9e-70 268.1 166 80.7
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 2.0e-63 246.1 168 76.8
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 2.0e-63 246.1 168 76.8
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 1.1e-58 230.3 168 70.8
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 2.2e-54 216.1 179 68.2
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 7.1e-53 211.1 167 70.7
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 2.7e-52 209.1 168 67.9
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 6.0e-52 208.0 167 65.9
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.8e-51 206.5 179 63.1
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.3e-51 206.1 178 62.9
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 2.3e-51 206.1 177 63.3
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 3.0e-51 205.7 190 60.5
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 3.9e-51 205.3 183 58.5
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 5.1e-51 204.9 175 63.4
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 5.1e-51 204.9 183 58.5
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 6.7e-51 204.5 178 62.4
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 1.1e-50 203.8 171 63.2
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.5e-50 203.4 179 62.0
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 2.5e-50 202.6 161 62.7
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 5.6e-50 201.4 175 61.7
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 7.4e-50 201.1 194 55.7
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 9.6e-50 200.7 175 61.7
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 1.3e-49 200.3 171 62.6
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.3e-49 200.3 183 57.4
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 3.7e-49 198.7 168 63.7
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 8.1e-49 197.6 175 60.6
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 8.1e-49 197.6 187 57.8
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 1.1e-48 197.2 187 56.7
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 1.1e-48 197.2 182 58.8
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 1.4e-48 196.8 100 90.0
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 1.4e-48 196.8 171 64.3
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 2.4e-48 196.1 180 59.4
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 2.4e-48 196.1 171 64.9
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 6.9e-48 194.5 191 57.1
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 9.0e-48 194.1 182 58.2
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 1.2e-47 193.7 162 64.2
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 1.5e-47 193.4 179 58.7
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 1.5e-47 193.4 96 90.6
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 2.0e-47 193.0 165 60.6
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 2.6e-47 192.6 128 70.3
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 2.6e-47 192.6 183 58.5
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 2.6e-47 192.6 186 56.5
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 4.5e-47 191.8 96 89.6
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 7.6e-47 191.0 179 57.5
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 9.9e-47 190.7 179 58.7
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 9.9e-47 190.7 179 59.2
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 9.9e-47 190.7 170 58.8
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 1.3e-46 190.3 179 57.5
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.3e-46 190.3 133 75.2
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 1.7e-46 189.9 176 57.4
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 1.7e-46 189.9 161 63.4
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 2.2e-46 189.5 170 58.8
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 2.2e-46 189.5 100 86.0
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 2.9e-46 189.1 173 57.8
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 2.9e-46 189.1 96 88.5
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 2.9e-46 189.1 177 57.6
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 3.8e-46 188.7 93 90.3
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 3.8e-46 188.7 185 54.6
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 3.8e-46 188.7 177 59.3
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 3.8e-46 188.7 175 60.0
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 4.9e-46 188.3 157 61.1
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 6.4e-46 188.0 179 58.1
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 6.4e-46 188.0 198 57.1
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 8.4e-46 187.6 175 58.3
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 2.4e-45 186.0 170 55.9
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 2.4e-45 186.0 170 55.9
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 2.4e-45 186.0 176 55.1
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 3.2e-45 185.7 170 55.9
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 3.2e-45 185.7 170 59.4
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 4.2e-45 185.3 176 55.1
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 4.2e-45 185.3 175 60.0
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 5.5e-45 184.9 176 56.8
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 7.1e-45 184.5 197 52.8
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 1.2e-44 183.7 178 58.4
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 1.2e-44 183.7 169 56.8
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 1.6e-44 183.3 172 54.7
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 1.6e-44 183.3 178 56.2
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 2.1e-44 183.0 123 69.9
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 2.1e-44 183.0 171 56.7
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 2.1e-44 183.0 106 80.2
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 2.7e-44 182.6 169 56.2
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 3.5e-44 182.2 187 58.3
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 3.5e-44 182.2 175 62.3
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 3.5e-44 182.2 178 55.6
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 4.6e-44 181.8 132 63.6
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 7.9e-44 181.0 180 54.4
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 1.0e-43 180.6 99 80.8
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 1.8e-43 179.9 145 62.8
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 1.8e-43 179.9 180 54.4
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 1.8e-43 179.9 163 56.4
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 3.0e-43 179.1 168 60.7
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 8.7e-43 177.6 155 61.3
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 1.5e-42 176.8 159 59.1
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 1.9e-42 176.4 177 53.1
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 2.5e-42 176.0 180 53.9
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 7.4e-42 174.5 162 58.6
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 9.6e-42 174.1 165 54.5
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 1.3e-41 173.7 172 52.3
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 2.1e-41 172.9 147 58.5
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 3.7e-41 172.2 133 62.4
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 4.8e-41 171.8 93 80.6
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 8.2e-41 171.0 93 80.6
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 1.8e-40 169.9 161 59.6
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 1.8e-40 169.9 153 56.2
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 3.1e-40 169.1 89 82.0
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 4.5e-39 165.2 93 77.4
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 2.2e-38 162.9 118 63.6
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 2.2e-38 162.9 170 54.7
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 3.8e-38 162.2 95 74.7
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 3.8e-38 162.2 141 55.3
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 4.9e-38 161.8 118 63.6
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 1.2e-36 157.1 172 51.2
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 7.9e-36 154.5 94 72.3
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.0e-35 154.1 128 55.5
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 6.7e-35 151.4 97 69.1
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 1.5e-34 150.2 78 83.3
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 3.7e-33 145.6 92 69.6
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 8.2e-33 144.4 96 67.7
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 1.1e-32 144.1 91 69.2
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 5.1e-27 125.2 143 54.5
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 1.5e-26 123.6 126 46.0
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 3.7e-25 119.0 98 53.1
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 6.5e-22 108.2 134 40.3
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 2.1e-20 103.2 93 52.7
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 3.2e-13 79.3 83 48.2


User provided reference genes

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