Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g037760 Pisum sativum HOM05D000533 ORTHO05D001069 2.0e-52 208.8 101 100.0
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 5.6e-47 190.7 98 91.8
Psat1g050080 Pisum sativum HOM05D000533 ORTHO05D001069 7.4e-47 190.3 92 97.8
Medtr2g451380 Medicago truncatula HOM05D000533 ORTHO05D001069 9.6e-47 189.9 92 96.7
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 9.6e-47 189.9 92 96.7
Psat0s1160g0320 Pisum sativum HOM05D000533 ORTHO05D001069 2.1e-46 188.7 92 96.7
LjContig00318g0022363 Lotus japonicus HOM05D000533 ORTHO05D001069 3.7e-46 188.0 92 95.7
LjContig00319g0004717 Lotus japonicus HOM05D000533 ORTHO05D001069 3.7e-46 188.0 92 95.7
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 3.7e-46 188.0 92 95.7
ATR0924G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 4.8e-46 187.6 92 96.7
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 4.8e-46 187.6 92 94.6
FAN01G2373 Fragaria x ananassa HOM05D000533 ORTHO05D001069 4.8e-46 187.6 92 94.6
Psat0s6989g0240 Pisum sativum HOM05D000533 ORTHO05D001069 4.8e-46 187.6 92 96.7
Lalb_Chr07g0191821 Lupinus albus HOM05D000533 ORTHO05D001069 8.1e-46 186.8 92 94.6
Lalb_Chr15g0080701 Lupinus albus HOM05D000533 ORTHO05D001069 1.4e-45 186.0 92 93.5
QL93p0141_0008 Quercus lobata HOM05D000533 ORTHO05D001069 3.1e-45 184.9 92 93.5
Ah.10g027260 Amaranthus hybridus HOM05D000533 ORTHO05D001069 4.0e-45 184.5 92 93.5
Ah.10g027700 Amaranthus hybridus HOM05D000533 ORTHO05D001069 4.0e-45 184.5 92 93.5
Peaxi162Scf00133g00521 Petunia axillaris HOM05D000533 ORTHO05D001069 6.9e-45 183.7 92 92.4
Solyc00g500087.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.9e-45 183.7 92 92.4
Solyc00g500124.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.9e-45 183.7 92 92.4
Solyc00g500192.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.9e-45 183.7 92 92.4
Solyc00g500280.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.9e-45 183.7 92 92.4
TAR625G0265 Trochodendron aralioides HOM05D000533 ORTHO05D001069 6.9e-45 183.7 92 93.5
ECA074G0013 Erigeron canadensis HOM05D000533 ORTHO05D001069 9.0e-45 183.3 92 93.5
Nn029s41575 Nelumbo nucifera HOM05D000533 ORTHO05D001069 9.0e-45 183.3 92 93.5
EL10Ac1g02290 Beta vulgaris HOM05D000533 ORTHO05D001069 1.5e-44 182.6 92 92.4
EL10Ac6g14289 Beta vulgaris HOM05D000533 ORTHO05D001069 1.5e-44 182.6 92 92.4
EL10Ac9g21011 Beta vulgaris HOM05D000533 ORTHO05D001069 1.5e-44 182.6 92 92.4
Sed0009234 Sechium edule HOM05D000533 ORTHO05D001069 1.5e-44 182.6 92 93.5
Sed0015694 Sechium edule HOM05D000533 ORTHO05D001069 1.5e-44 182.6 92 93.5
Sed0022513 Sechium edule HOM05D000533 ORTHO05D001069 1.5e-44 182.6 92 93.5
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQChr00c0504g0575331 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQChr17g0557731 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
Hma1.2p1_0660F.1_g197430 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 93.5
PSO548G0122 Papaver somniferum HOM05D000533 ORTHO05D001069 2.0e-44 182.2 92 92.4
DCAR_032542 Daucus carota HOM05D000533 ORTHO05D001069 2.6e-44 181.8 92 93.5
PGR111G0062 Punica granatum HOM05D000533 ORTHO05D001069 2.6e-44 181.8 92 91.3
Ah.10g027020 Amaranthus hybridus HOM05D000533 ORTHO05D001069 3.4e-44 181.4 92 91.3
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 4.5e-44 181.0 92 91.3
Gohir.1Z049694 Gossypium hirsutum HOM05D000533 ORTHO05D001069 5.8e-44 180.6 92 91.3
Lsat_1_v5_gn_4_33860 Lactuca sativa HOM05D000533 ORTHO05D001069 5.8e-44 180.6 92 93.5
Lsat_1_v5_gn_5_124461 Lactuca sativa HOM05D000533 ORTHO05D001069 5.8e-44 180.6 92 93.5
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 5.8e-44 180.6 92 93.5
Lsat_1_v5_gn_8_137301 Lactuca sativa HOM05D000533 ORTHO05D001069 5.8e-44 180.6 92 93.5
Lsat_1_v5_gn_9_115440 Lactuca sativa HOM05D000533 ORTHO05D001069 5.8e-44 180.6 92 93.5
Sopen04g017430 Solanum pennellii HOM05D000533 ORTHO05D001069 5.8e-44 180.6 92 90.2
Gorai.009G313900 Gossypium raimondii HOM05D000533 ORTHO05D001069 1.0e-43 179.9 92 90.2
Lj2C1238G31 Lonicera japonica HOM05D000533 ORTHO05D001069 1.0e-43 179.9 92 91.3
Lju5009C0T5 Lonicera japonica HOM05D000533 ORTHO05D001069 1.0e-43 179.9 92 91.3
RcHm_v2.0_Chr3g0470811 Rosa chinensis HOM05D000533 ORTHO05D001069 1.3e-43 179.5 92 90.2
Gohir.1Z050466 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.7e-43 179.1 92 91.3
Hund28343 Selenicereus undatus HOM05D000533 ORTHO05D001069 4.9e-43 177.6 92 91.3
Hund29094 Selenicereus undatus HOM05D000533 ORTHO05D001069 4.9e-43 177.6 92 91.3
Hund30658 Selenicereus undatus HOM05D000533 ORTHO05D001069 4.9e-43 177.6 92 91.3
Hund30925 Selenicereus undatus HOM05D000533 ORTHO05D001069 4.9e-43 177.6 92 91.3
Atru.chr2.908 Acer truncatum HOM05D000533 ORTHO05D001069 6.5e-43 177.2 92 92.4
BolC9t56912H Brassica oleracea HOM05D000533 ORTHO05D001069 6.5e-43 177.2 92 90.2
ATCG01110 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
C05p53840 Brassica napus HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
C07p33470 Brassica napus HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
C09p40300 Brassica napus HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
BolSC29t60510H Brassica oleracea HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
BolSC35t60688H Brassica oleracea HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
BolSC35t60708H Brassica oleracea HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
BolSC37t60797H Brassica oleracea HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
BraSC138t45531Z Brassica rapa HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
BraSC143t45656Z Brassica rapa HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
BraSC25t45914Z Brassica rapa HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
BraSC59t46554Z Brassica rapa HOM05D000533 ORTHO05D001069 8.4e-43 176.8 92 90.2
Gohir.A13G086335 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.1e-42 176.4 92 90.2
Lsat_1_v5_gn_6_87021 Lactuca sativa HOM05D000533 ORTHO05D001069 1.4e-42 176.0 89 92.1
Phvul.004G015300 Phaseolus vulgaris HOM05D000533 ORTHO05D001069 1.4e-42 176.0 98 86.7
Lsat_1_v5_gn_4_118061 Lactuca sativa HOM05D000533 ORTHO05D001069 1.9e-42 175.6 92 91.3
Nitab4.5_0006502g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.1e-42 173.7 92 84.8
BolC9t56921H Brassica oleracea HOM05D000533 ORTHO05D001069 1.2e-41 172.9 92 88.0
Atru.chr5.1326 Acer truncatum HOM05D000533 ORTHO05D001069 2.7e-41 171.8 96 86.5
CAN.G965.3 Capsicum annuum HOM05D000533 ORTHO05D001069 2.7e-41 171.8 82 96.3
Gohir.A04G053078 Gossypium hirsutum HOM05D000533 ORTHO05D001069 4.6e-41 171.0 92 88.0
Eucgr.B00847 Eucalyptus grandis HOM05D000533 ORTHO05D001069 1.0e-40 169.9 89 87.6
Peaxi162Scf00030g02114 Petunia axillaris HOM05D000533 ORTHO05D001069 2.3e-40 168.7 90 86.7
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 3.9e-40 167.9 92 85.9
SEGI_26516 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 3.9e-40 167.9 92 85.9
Oeu015129.1 Olea europaea HOM05D000533 ORTHO05D001069 5.1e-40 167.5 92 87.0
Nitab4.5_0006409g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.7e-40 166.8 92 83.7
CAN.G1045.9 Capsicum annuum HOM05D000533 ORTHO05D001069 2.5e-39 165.2 78 96.2
CAN.G1470.8 Capsicum annuum HOM05D000533 ORTHO05D001069 2.5e-39 165.2 78 96.2
CAN.G378.10 Capsicum annuum HOM05D000533 ORTHO05D001069 3.3e-39 164.9 82 90.2
Solyc08g022170.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.3e-39 164.5 92 82.6
unitig_91.g26523 Utricularia gibba HOM05D000533 ORTHO05D001069 5.7e-39 164.1 78 97.4
DCAR_005908 Daucus carota HOM05D000533 ORTHO05D001069 7.4e-39 163.7 78 97.4
FvH4_6g41620 Fragaria vesca HOM05D000533 ORTHO05D001069 7.4e-39 163.7 78 96.2
Glyma.18G155701 Glycine max HOM05D000533 ORTHO05D001069 7.4e-39 163.7 92 85.9
ClCG11G009630 Citrullus lanatus HOM05D000533 ORTHO05D001069 1.3e-38 162.9 78 96.2
MELO3C027054.2 Cucumis melo HOM05D000533 ORTHO05D001069 1.3e-38 162.9 78 96.2
BolC7t43858H Brassica oleracea HOM05D000533 ORTHO05D001069 1.6e-38 162.5 86 89.5
Potri.013G074650 Populus trichocarpa HOM05D000533 ORTHO05D001069 2.4e-37 158.7 82 89.0
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 9.0e-37 156.8 92 82.6
SEGI_26586 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 9.0e-37 156.8 92 80.4
ClCG07G012690 Citrullus lanatus HOM05D000533 ORTHO05D001069 3.4e-36 154.8 77 93.5
Psat0s1920g0160 Pisum sativum HOM05D000533 ORTHO05D001069 3.4e-36 154.8 78 91.0
arahy.Tifrunner.gnm1.ann1.EMA6B0 Arachis hypogaea HOM05D000533 ORTHO05D001069 5.9e-36 154.1 92 81.5
Lsat_1_v5_gn_5_66001 Lactuca sativa HOM05D000533 ORTHO05D001069 1.0e-35 153.3 92 82.6
ClCG10G006000 Citrullus lanatus HOM05D000533 ORTHO05D001069 1.9e-34 149.1 92 79.3
Gorai.013G076700 Gossypium raimondii HOM05D000533 ORTHO05D001069 4.2e-34 147.9 76 89.5
vmacro22393 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 1.2e-33 146.4 71 95.8
vmacro22419 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 1.2e-33 146.4 71 95.8
Nitab4.5_0007400g0140 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.7e-33 145.2 87 79.3
Medtr4g117480 Medicago truncatula HOM05D000533 ORTHO05D001069 3.9e-32 141.4 70 92.9
Sed0014804 Sechium edule HOM05D000533 ORTHO05D001069 1.5e-31 139.4 92 76.1
SMO086G0065 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 1.3e-30 136.3 86 73.3
Lalb_Chr25g0284051 Lupinus albus HOM05D000533 ORTHO05D001069 2.0e-28 129.0 65 92.3
BolC5t34051H Brassica oleracea HOM05D000533 ORTHO05D001069 5.9e-28 127.5 69 87.0
Gohir.D08G207450 Gossypium hirsutum HOM05D000533 ORTHO05D001069 2.1e-25 119.0 67 82.1
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 8.8e-24 113.6 81 72.8
Mapoly0048s0044 Marchantia polymorpha HOM05D000533 ORTHO05D001069 2.2e-22 109.0 55 87.3
Gorai.004G123700 Gossypium raimondii HOM05D000533 ORTHO05D001069 4.8e-22 107.8 87 64.4
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 4.8e-22 107.8 92 60.9
SabraPtG0005900 Salix brachista HOM05D000533 ORTHO05D001069 4.8e-22 107.8 92 60.9
arahy.Tifrunner.gnm1.ann1.JUM97N Arachis hypogaea HOM05D000533 ORTHO05D001069 8.2e-22 107.1 92 59.8
CSS0030738 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 1.1e-21 106.7 92 62.0
Gohir.A01G140323 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.1e-21 106.7 92 62.0
Gohir.D11G334151 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.1e-21 106.7 92 62.0
Lalb_Chr18g0049401 Lupinus albus HOM05D000533 ORTHO05D001069 1.1e-21 106.7 63 82.5
TPR.G20526 Trifolium pratense HOM05D000533 ORTHO05D001069 1.1e-21 106.7 76 69.7
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 3.1e-21 105.1 53 88.7
SMO086G0066 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 4.1e-21 104.8 60 80.0
Psat7g199400 Pisum sativum HOM05D000533 ORTHO05D001069 2.0e-20 102.4 49 95.9
Psat0s2709g0120 Pisum sativum HOM05D000533 ORTHO05D001069 5.9e-20 100.9 50 94.0
Eucgr.F01268 Eucalyptus grandis HOM05D000533 ORTHO05D001069 1.0e-19 100.1 63 77.8
Gohir.D09G085250 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.4e-18 96.3 56 76.8
HanXRQChr11g0321231 Helianthus annuus HOM05D000533 ORTHO05D001069 2.5e-18 95.5 82 62.2
Hund17906 Selenicereus undatus HOM05D000533 ORTHO05D001069 4.2e-18 94.7 66 66.7
TPR.G30414 Trifolium pratense HOM05D000533 ORTHO05D001069 5.5e-18 94.4 55 81.8
Gorai.006G101200 Gossypium raimondii HOM05D000533 ORTHO05D001069 2.1e-17 92.4 56 76.8
Psat7g126800 Pisum sativum HOM05D000533 ORTHO05D001069 4.7e-17 91.3 42 100.0
SalBow1G1175 Salvia bowleyana HOM05D000533 ORTHO05D001069 3.0e-16 88.6 78 61.5
CAN.G127.10 Capsicum annuum HOM05D000533 ORTHO05D001069 1.5e-15 86.3 49 75.5
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 3.3e-15 85.1 82 50.0
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 5.7e-15 84.3 80 48.8
AL9U11960 Arabidopsis lyrata HOM05D000533 ORTHO05D001069 1.7e-14 82.8 81 53.1
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 2.8e-14 82.0 80 46.2
Solyc01g017740.2 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.8e-14 82.0 40 90.0
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 6.3e-14 80.9 80 46.2
TPR.G9361 Trifolium pratense HOM05D000533 ORTHO05D001069 8.2e-14 80.5 85 49.4
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 1.8e-13 79.3 80 45.0
SEGI_36880 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.8e-13 79.3 67 59.7
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 2.4e-13 79.0 80 46.2
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 2.4e-13 79.0 80 47.5
Nitab4.5_0000729g0120 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.1e-13 78.6 66 60.6
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 5.3e-13 77.8 78 47.4
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 7.0e-13 77.4 78 47.4
Eucgr.I00925 Eucalyptus grandis HOM05D000533 ORTHO05D001069 1.2e-12 76.6 58 67.2
Aa31LG5G21740 Aethionema arabicum HOM05D000533 ORTHO05D001069 2.6e-12 75.5 55 74.5
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 3.5e-12 75.1 78 46.2
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 3.5e-12 75.1 78 46.2
AUR62043262 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.0e-11 73.6 37 86.5
Aqoxy84s002 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.3e-11 73.2 85 37.6
Gohir.D08G108108 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.7e-11 72.8 45 80.0
Nitab4.5_0000843g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.5e-11 70.9 40 75.0
EL10Ac7g16243 Beta vulgaris HOM05D000533 ORTHO05D001069 8.5e-11 70.5 94 44.7
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 1.9e-10 69.3 66 48.5
TPR.G15418 Trifolium pratense HOM05D000533 ORTHO05D001069 1.0e-08 63.5 39 79.5
Actinidia30480 Actinidia chinensis HOM05D000533 ORTHO05D001069 1.8e-08 62.8 28 100.0
Solyc02g011810.3 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.3e-08 62.4 32 87.5
AUR62028573 Chenopodium quinoa HOM05D000533 ORTHO05D001069 3.0e-08 62.0 30 90.0
Migut.I00424 Erythranthe guttata HOM05D000533 ORTHO05D001069 5.7e-07 57.8 35 74.3
Lalb_Chr00c24g0407321 Lupinus albus HOM05D000533 ORTHO05D011488 1.3e-06 56.6 56 46.4
HanXRQChr01g0000281 Helianthus annuus HOM05D000533 ORTHO05D001069 2.8e-06 55.5 44 68.2
arahy.Tifrunner.gnm1.ann1.RF9S3R Arachis hypogaea HOM05D000533 ORTHO05D001069 3.7e-06 55.1 26 92.3
PGSC0003DMG400013204 Solanum tuberosum HOM05D000533 ORTHO05D011488 8.2e-06 53.9 56 46.4


User provided reference genes

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