Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g155280 Pisum sativum HOM05D003317 ORTHO05D003696 7.6e-95 350.5 180 100.0
Psat1g134160 Pisum sativum HOM05D003317 ORTHO05D003696 2.1e-81 305.8 215 78.6
TPR.G28585 Trifolium pratense HOM05D003317 ORTHO05D003696 1.9e-74 282.7 214 72.4
Medtr2g041610 Medicago truncatula HOM05D003317 ORTHO05D003696 1.6e-73 279.6 214 71.5
Lalb_Chr23g0276391 Lupinus albus HOM05D003317 ORTHO05D003696 5.5e-69 264.6 215 66.0
Phvul.009G227500 Phaseolus vulgaris HOM05D003317 ORTHO05D003696 4.6e-68 261.5 214 66.8
VMungo1309G0541 Vigna mungo HOM05D003317 ORTHO05D003696 3.9e-67 258.5 214 66.4
Ca_23417_v3 Cicer arietinum L. HOM05D003317 ORTHO05D003696 4.3e-66 255.0 180 76.1
Lj6g0021845 Lotus japonicus HOM05D003317 ORTHO05D003696 1.0e-62 243.8 215 61.4
Phvul.003G131200 Phaseolus vulgaris HOM05D003317 ORTHO05D003696 7.2e-61 237.7 214 62.6
VMungo1215G0865 Vigna mungo HOM05D003317 ORTHO05D003696 7.2e-61 237.7 214 62.6
Glyma.17G049600 Glycine max HOM05D003317 ORTHO05D003696 6.1e-60 234.6 214 60.7
arahy.Tifrunner.gnm1.ann1.MFQ8D7 Arachis hypogaea HOM05D003317 ORTHO05D003696 8.2e-57 224.2 214 59.3
Lalb_Chr07g0181161 Lupinus albus HOM05D003317 ORTHO05D003696 1.4e-56 223.4 214 57.9
arahy.Tifrunner.gnm1.ann1.81HHLD Arachis hypogaea HOM05D003317 ORTHO05D003696 1.0e-54 217.2 214 58.4
Medtr4g125410 Medicago truncatula HOM05D003317 ORTHO05D003696 1.1e-53 213.8 214 57.0
FvH4_1g08600 Fragaria vesca HOM05D003317 ORTHO05D003696 1.8e-51 206.5 214 52.8
FAN19G2419 Fragaria x ananassa HOM05D003317 ORTHO05D003696 1.8e-51 206.5 214 52.8
FAN23G1713 Fragaria x ananassa HOM05D003317 ORTHO05D003696 3.0e-51 205.7 214 52.8
FAN28G0340 Fragaria x ananassa HOM05D003317 ORTHO05D003696 3.0e-51 205.7 214 52.3
Medtr4g125440 Medicago truncatula HOM05D003317 ORTHO05D003696 3.0e-51 205.7 214 56.1
Cfa002995 Carpinus fangiana HOM05D003317 ORTHO05D003696 1.8e-48 196.4 214 51.4
arahy.Tifrunner.gnm1.ann1.7WMI9V Arachis hypogaea HOM05D003317 ORTHO05D003696 3.1e-48 195.7 214 54.7
arahy.Tifrunner.gnm1.ann1.C19Y0U Arachis hypogaea HOM05D003317 ORTHO05D003696 3.1e-48 195.7 214 54.7
Ca_21319_v3 Cicer arietinum L. HOM05D003317 ORTHO05D003696 3.1e-48 195.7 214 53.7
Sabra06G0111300 Salix brachista HOM05D003317 ORTHO05D003696 7.0e-48 194.5 214 52.3
TPR.G9461 Trifolium pratense HOM05D003317 ORTHO05D003696 1.6e-47 193.4 213 52.1
TAR626G1452 Trochodendron aralioides HOM05D003317 ORTHO05D003696 2.6e-47 192.6 214 52.8
TAR626G1699 Trochodendron aralioides HOM05D003317 ORTHO05D003696 2.6e-47 192.6 214 52.8
CAN.G498.3 Capsicum annuum HOM05D003317 ORTHO05D003696 4.5e-47 191.8 214 50.0
TAR624G0435 Trochodendron aralioides HOM05D003317 ORTHO05D003696 4.5e-47 191.8 214 50.5
CAN.G63.8 Capsicum annuum HOM05D003317 ORTHO05D003696 2.2e-46 189.5 214 49.5
Eucgr.C00817 Eucalyptus grandis HOM05D003317 ORTHO05D003696 3.8e-46 188.7 214 50.5
Prupe.7G199800 Prunus persica HOM05D003317 ORTHO05D003696 5.0e-46 188.3 172 57.6
RcHm_v2.0_Chr2g0094821 Rosa chinensis HOM05D003317 ORTHO05D003696 5.0e-46 188.3 214 50.5
Hund08778 Selenicereus undatus HOM05D003317 ORTHO05D003696 6.5e-46 188.0 214 49.1
Potri.006G142200 Populus trichocarpa HOM05D003317 ORTHO05D003696 8.5e-46 187.6 214 51.9
Actinidia29929 Actinidia chinensis HOM05D003317 ORTHO05D003696 1.1e-45 187.2 214 50.0
CANSAT56G0327 Cannabis sativa HOM05D003317 ORTHO05D003696 1.1e-45 187.2 214 49.1
CiPaw.03G207100 Carya illinoinensis HOM05D003317 ORTHO05D003696 1.1e-45 187.2 214 50.5
Dinv42387 Davidia involucrata HOM05D003317 ORTHO05D003696 1.1e-45 187.2 214 51.4
Lj7A221G28 Lonicera japonica HOM05D003317 ORTHO05D003696 1.1e-45 187.2 214 51.4
Thecc.09G078000 Theobroma cacao HOM05D003317 ORTHO05D003696 1.1e-45 187.2 213 51.2
Haze_26007 Corylus avellana HOM05D003317 ORTHO05D003696 1.5e-45 186.8 214 50.5
HanXRQChr09g0237821 Helianthus annuus HOM05D003317 ORTHO05D003696 1.9e-45 186.4 215 47.4
Gohir.A06G076100 Gossypium hirsutum HOM05D003317 ORTHO05D003696 2.5e-45 186.0 214 48.6
Nitab4.5_0000343g0140 Nicotiana tabacum HOM05D003317 ORTHO05D003696 2.5e-45 186.0 214 50.5
Nitab4.5_0002966g0040 Nicotiana tabacum HOM05D003317 ORTHO05D003696 2.5e-45 186.0 214 51.4
Peaxi162Scf00127g00131 Petunia axillaris HOM05D003317 ORTHO05D003696 2.5e-45 186.0 214 50.9
Lsat_1_v5_gn_7_35060 Lactuca sativa HOM05D003317 ORTHO05D003696 5.5e-45 184.9 214 46.7
PGSC0003DMG400013008 Solanum tuberosum HOM05D003317 ORTHO05D003696 5.5e-45 184.9 214 49.5
Atru.chr7.1699 Acer truncatum HOM05D003317 ORTHO05D003696 7.2e-45 184.5 214 51.4
Sopen07g021250 Solanum pennellii HOM05D003317 ORTHO05D003696 7.2e-45 184.5 214 49.1
Duzib168G0118 Durio zibethinus HOM05D003317 ORTHO05D003696 9.4e-45 184.1 214 50.5
Oeu063419.1 Olea europaea HOM05D003317 ORTHO05D003696 1.2e-44 183.7 203 48.8
THA.LOC104815331 Tarenaya hassleriana HOM05D003317 ORTHO05D003696 1.2e-44 183.7 214 47.7
Ciclev10007604m.g Citrus clementina HOM05D003317 ORTHO05D003696 1.6e-44 183.3 214 50.0
Cfa002996 Carpinus fangiana HOM05D003317 ORTHO05D003696 2.1e-44 183.0 213 49.3
Gorai.010G087700 Gossypium raimondii HOM05D003317 ORTHO05D003696 2.7e-44 182.6 214 48.1
Oeu018029.1 Olea europaea HOM05D003317 ORTHO05D003696 2.7e-44 182.6 214 47.7
Thecc.09G063600 Theobroma cacao HOM05D003317 ORTHO05D003696 3.6e-44 182.2 214 50.5
Dinv41844 Davidia involucrata HOM05D003317 ORTHO05D003696 4.7e-44 181.8 214 49.5
QL11p000685 Quercus lobata HOM05D003317 ORTHO05D003696 4.7e-44 181.8 214 47.7
BcaB06g26884 Brassica carinata HOM05D003317 ORTHO05D003696 6.1e-44 181.4 214 47.7
Gohir.D06G075100 Gossypium hirsutum HOM05D003317 ORTHO05D003696 1.4e-43 180.3 214 47.7
Manes.16G095800 Manihot esculenta HOM05D003317 ORTHO05D003696 1.8e-43 179.9 214 47.7
Lj4g0026519 Lotus japonicus HOM05D003317 ORTHO05D003696 3.0e-43 179.1 214 50.5
COL.COLO4_21141 Corchorus olitorius HOM05D003317 ORTHO05D003696 4.0e-43 178.7 198 52.0
TWI34G1043 Tripterygium wilfordii HOM05D003317 ORTHO05D003696 5.2e-43 178.3 214 49.1
MBI19_g11829_MAGBIO Magnolia biondii HOM05D003317 ORTHO05D003696 8.8e-43 177.6 215 47.4
Migut.L01559 Erythranthe guttata HOM05D003317 ORTHO05D003696 1.2e-42 177.2 214 47.2
Psat4g017800 Pisum sativum HOM05D003317 ORTHO05D003696 1.2e-42 177.2 214 48.6
ECA240G4381 Erigeron canadensis HOM05D003317 ORTHO05D003696 2.0e-42 176.4 214 45.8
Sp3g24620 Schrenkiella parvula HOM05D003317 ORTHO05D003696 2.0e-42 176.4 214 44.9
GSVIVG01015088001 Vitis vinifera HOM05D003317 ORTHO05D003696 2.0e-42 176.4 214 50.0
PGR142G0733 Punica granatum HOM05D003317 ORTHO05D003696 2.6e-42 176.0 214 47.7
SHI33751 Sapria himalayana HOM05D003317 ORTHO05D003696 2.6e-42 176.0 214 46.7
SGA_v2.0_scaffold21G09482 Striga asiatica HOM05D003317 ORTHO05D003696 3.3e-42 175.6 214 46.7
AUR62025246 Chenopodium quinoa HOM05D003317 ORTHO05D003696 4.4e-42 175.3 214 47.7
Duzib168G1355 Durio zibethinus HOM05D003317 ORTHO05D003696 4.4e-42 175.3 214 50.0
Nitab4.5_0008422g0030 Nicotiana tabacum HOM05D003317 ORTHO05D003696 5.7e-42 174.9 214 49.1
AUR62028939 Chenopodium quinoa HOM05D003317 ORTHO05D003696 7.5e-42 174.5 214 47.7
MSTRG.25987 Avicennia marina HOM05D003317 ORTHO05D003696 9.7e-42 174.1 214 45.3
CARHR103720 Cardamine hirsuta HOM05D003317 ORTHO05D003696 1.3e-41 173.7 214 46.7
AL3G43680 Arabidopsis lyrata HOM05D003317 ORTHO05D003696 1.7e-41 173.3 214 47.2
Gorai.001G020000 Gossypium raimondii HOM05D003317 ORTHO05D003696 4.8e-41 171.8 203 47.8
Cpa.g.sc126.22 Carica papaya HOM05D003317 ORTHO05D003696 6.3e-41 171.4 214 47.2
Cc08_g01130 Coffea canephora HOM05D003317 ORTHO05D003696 6.3e-41 171.4 214 49.5
MD15G1216800 Malus domestica HOM05D003317 ORTHO05D003696 6.3e-41 171.4 214 46.7
BcaC06g35953 Brassica carinata HOM05D003317 ORTHO05D003696 8.2e-41 171.0 214 45.8
Nitab4.5_0000446g0150 Nicotiana tabacum HOM05D003317 ORTHO05D003696 8.2e-41 171.0 220 47.3
Glyma.15G177400 Glycine max HOM05D003317 ORTHO05D003696 1.1e-40 170.6 164 60.4
Gohir.A07G019500 Gossypium hirsutum HOM05D003317 ORTHO05D003696 1.1e-40 170.6 203 47.8
Gohir.D07G019300 Gossypium hirsutum HOM05D003317 ORTHO05D003696 1.1e-40 170.6 203 48.3
EL10Ac8g19064 Beta vulgaris HOM05D003317 ORTHO05D003696 1.4e-40 170.2 229 43.7
Manes.03G053200 Manihot esculenta HOM05D003317 ORTHO05D003696 3.1e-40 169.1 214 47.7
C07p09320 Brassica napus HOM05D003317 ORTHO05D003696 4.1e-40 168.7 214 45.3
MELO3C015517.2 Cucumis melo HOM05D003317 ORTHO05D003696 5.3e-40 168.3 214 47.2
Sed0023098 Sechium edule HOM05D003317 ORTHO05D003696 5.3e-40 168.3 217 46.1
Cc06_g12060 Coffea canephora HOM05D003317 ORTHO05D003696 7.0e-40 167.9 214 46.3
Psat4g017760 Pisum sativum HOM05D003317 ORTHO05D003696 7.0e-40 167.9 214 46.3
Carub.0003s2717 Capsella rubella HOM05D003317 ORTHO05D003696 9.1e-40 167.5 214 43.9
TWI32G0197 Tripterygium wilfordii HOM05D003317 ORTHO05D003696 1.2e-39 167.2 214 45.3
Lj7A686T70 Lonicera japonica HOM05D003317 ORTHO05D003696 2.0e-39 166.4 227 44.9
Nn6g35618 Nelumbo nucifera HOM05D003317 ORTHO05D003696 2.0e-39 166.4 201 47.8
Solyc08g061650.4 Solanum lycopersicum HOM05D003317 ORTHO05D003696 5.9e-39 164.9 214 45.8
AT2G06040 Arabidopsis thaliana HOM05D003317 ORTHO05D003696 7.7e-39 164.5 214 44.9
BraA07t28422Z Brassica rapa HOM05D003317 ORTHO05D003696 7.7e-39 164.5 217 44.7
SalBow4G1263 Salvia bowleyana HOM05D003317 ORTHO05D003696 1.0e-38 164.1 213 45.1
Potri.006G220600 Populus trichocarpa HOM05D003317 ORTHO05D003696 1.3e-38 163.7 214 44.9
CsaV3_1G040990 Cucumis sativus L. HOM05D003317 ORTHO05D003696 1.7e-38 163.3 214 45.8
Migut.A00075 Erythranthe guttata HOM05D003317 ORTHO05D003696 2.2e-38 162.9 214 43.5
BolC7t41350H Brassica oleracea HOM05D003317 ORTHO05D003696 6.5e-38 161.4 222 43.7
A07p06270 Brassica napus HOM05D003317 ORTHO05D003696 1.1e-37 160.6 217 44.7
DCAR_004378 Daucus carota HOM05D003317 ORTHO05D003696 1.5e-37 160.2 213 44.6
CSS0017754 Camellia sinensis var. sinensis HOM05D003317 ORTHO05D003696 1.9e-37 159.8 214 45.8
Sed0002159 Sechium edule HOM05D003317 ORTHO05D003696 2.5e-37 159.5 211 45.0
Aqoxy7G03984 Aquilegia oxysepala HOM05D003317 ORTHO05D003696 1.2e-36 157.1 215 44.7
ClCG03G015120 Citrullus lanatus HOM05D003317 ORTHO05D003696 1.0e-35 154.1 248 39.5
Zm00001eb040360 Zea mays HOM05D003317 ORTHO05D003696 1.4e-35 153.7 215 43.7
FAN26G2208 Fragaria x ananassa HOM05D003317 ORTHO05D003696 1.8e-35 153.3 173 51.4
SGA_v2.0_scaffold20G09159 Striga asiatica HOM05D003317 ORTHO05D003696 1.8e-35 153.3 218 41.3
FAN26G0708 Fragaria x ananassa HOM05D003317 ORTHO05D003696 2.3e-35 152.9 173 51.4
PSO135G1032 Papaver somniferum HOM05D003317 ORTHO05D003696 2.3e-35 152.9 215 44.7
Rhsim01G0183000 Rhododendron simsii HOM05D003317 ORTHO05D003696 3.0e-35 152.5 219 43.4
Ciclev10010155m.g Citrus clementina HOM05D003317 ORTHO05D003696 4.0e-35 152.1 214 44.9
DCAR_028330 Daucus carota HOM05D003317 ORTHO05D003696 5.2e-35 151.8 214 43.0
Os08g0459100 Oryza sativa ssp. japonica HOM05D003317 ORTHO05D003696 5.7e-34 148.3 215 41.4
Psat4g030640 Pisum sativum HOM05D003317 ORTHO05D003696 7.5e-34 147.9 214 44.4
Ah.09g231590 Amaranthus hybridus HOM05D003317 ORTHO05D003696 9.8e-34 147.5 214 43.5
Glyma.13G110100 Glycine max HOM05D003317 ORTHO05D003696 2.8e-33 146.0 162 53.1
PSO210G7636 Papaver somniferum HOM05D003317 ORTHO05D003696 1.1e-32 144.1 215 43.7
Sabra06G0170300 Salix brachista HOM05D003317 ORTHO05D003696 1.4e-32 143.7 248 37.9
HPP92_004371 Vanilla planifolia HOM05D003317 ORTHO05D003696 4.1e-32 142.1 215 40.9
Zm00001eb177300 Zea mays HOM05D003317 ORTHO05D003696 1.2e-31 140.6 215 42.3
DCAR_001231 Daucus carota HOM05D003317 ORTHO05D003696 1.6e-31 140.2 219 42.9
ATR0598G291 Amborella trichopoda HOM05D003317 ORTHO05D003696 2.5e-29 132.9 201 40.8
Lj1g0018915 Lotus japonicus HOM05D003317 ORTHO05D003696 3.2e-29 132.5 215 40.5
vmacro12621 Vaccinium macrocarpon HOM05D003317 ORTHO05D003696 4.7e-28 128.6 305 33.1
Rhsim03G0227900 Rhododendron simsii HOM05D003317 ORTHO05D003696 1.8e-27 126.7 214 39.7
COL.COLO4_18104 Corchorus olitorius HOM05D003317 ORTHO05D003696 2.3e-27 126.3 225 38.7
Psat4g017720 Pisum sativum HOM05D003317 ORTHO05D003696 1.1e-24 117.5 212 41.0
A03p10450 Brassica napus HOM05D003317 ORTHO05D003696 7.0e-24 114.8 155 41.9
BcaB01g04757 Brassica carinata HOM05D003317 ORTHO05D003696 9.2e-24 114.4 214 36.9
Sopen00g008950 Solanum pennellii HOM05D003317 ORTHO05D003696 9.2e-24 114.4 161 42.9
THA.LOC104799577 Tarenaya hassleriana HOM05D003317 ORTHO05D003696 1.2e-23 114.0 214 36.4
BraA03t10357Z Brassica rapa HOM05D003317 ORTHO05D003696 2.0e-23 113.2 155 41.3
CARHR191640 Cardamine hirsuta HOM05D003317 ORTHO05D003696 7.8e-23 111.3 215 36.3
GSVIVG01035471001 Vitis vinifera HOM05D003317 ORTHO05D003696 2.9e-22 109.4 217 36.4
vmacro06338 Vaccinium macrocarpon HOM05D003317 ORTHO05D003696 6.6e-22 108.2 79 65.8
HanXRQChr03g0065631 Helianthus annuus HOM05D003317 ORTHO05D003696 8.6e-22 107.8 216 36.6
AL6G32870 Arabidopsis lyrata HOM05D003317 ORTHO05D003696 3.3e-21 105.9 215 38.1
BolC3t13673H Brassica oleracea HOM05D003317 ORTHO05D003696 5.6e-21 105.1 214 35.5
Medtr4g125390 Medicago truncatula HOM05D003317 ORTHO05D003696 1.2e-20 104.0 78 70.5
Sopen08g017110 Solanum pennellii HOM05D003317 ORTHO05D003696 3.6e-20 102.4 85 60.0
C03p12020 Brassica napus HOM05D003317 ORTHO05D003696 6.1e-20 101.7 214 35.0
Sp6g23290 Schrenkiella parvula HOM05D003317 ORTHO05D003696 1.8e-19 100.1 155 40.0
Thhalv10002406m.g Eutrema salsugineum HOM05D003317 ORTHO05D003696 3.0e-19 99.4 166 40.4
SEGI_37822 Sequoiadendron giganteum HOM05D003317 ORTHO05D003696 8.3e-17 91.3 215 34.0
SEGI_25513 Sequoiadendron giganteum HOM05D003317 ORTHO05D003696 1.1e-16 90.9 217 34.6
Glyma.09G069401 Glycine max HOM05D003317 ORTHO05D003696 2.0e-15 86.7 101 47.5
TPR.G55 Trifolium pratense HOM05D003317 ORTHO05D003696 5.9e-15 85.1 104 49.0
MD02G1090300 Malus domestica HOM05D003317 ORTHO05D003696 2.3e-14 83.2 53 69.8
AL1G20670 Arabidopsis lyrata HOM05D003317 ORTHO05D003696 5.0e-14 82.0 219 29.7
Sc18g0002500 Simmondsia chinensis HOM05D003317 ORTHO05D003696 1.9e-13 80.1 73 56.2
MSTRG.10519 Avicennia marina HOM05D003317 ORTHO05D003696 2.5e-13 79.7 85 52.9
Peaxi162Scf00486g01021 Petunia axillaris HOM05D003317 ORTHO05D003696 1.2e-12 77.4 90 55.6
Phvul.007G217300 Phaseolus vulgaris HOM05D003317 ORTHO05D003696 3.6e-12 75.9 48 79.2
vmacro06337 Vaccinium macrocarpon HOM05D003317 ORTHO05D003696 4.7e-12 75.5 139 36.7
Cpa.g.sc28.54 Carica papaya HOM05D003317 ORTHO05D003696 1.1e-11 74.3 214 30.4
TWI34G1197 Tripterygium wilfordii HOM05D003317 ORTHO05D003696 1.1e-11 74.3 167 34.1
AagrBONN_evm.TU.Sc2ySwM_368.362 Anthoceros agrestis HOM05D003317 ORTHO05D003696 1.8e-11 73.6 88 46.6
MD02G1090200 Malus domestica HOM05D003317 ORTHO05D003696 2.3e-11 73.2 73 53.4
Sopen08g017120 Solanum pennellii HOM05D003317 ORTHO05D003696 3.1e-11 72.8 102 43.1
PGSC0003DMG400018807 Solanum tuberosum HOM05D003317 ORTHO05D003696 6.8e-11 71.6 161 34.2
AUR62042996 Chenopodium quinoa HOM05D003317 ORTHO05D003696 4.4e-10 68.9 86 40.7
Aa31sc133G60 Aethionema arabicum HOM05D003317 ORTHO05D003696 1.3e-09 67.4 223 26.5
CDE05G2394 Ceratophyllum demersum HOM05D001216 ORTHO05D003822 1.3e-09 67.4 75 45.3
Carub.0006s1954 Capsella rubella HOM05D003317 ORTHO05D003696 1.7e-09 67.0 215 28.8
Thhalv10015473m.g Eutrema salsugineum HOM05D003317 ORTHO05D003696 3.9e-06 55.8 182 28.0


User provided reference genes

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