Gene: AT2G06040

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G06040
  • Transcript Identifier AT2G06040.1
  • Gene Type Coding gene
  • Location Chr2 : 2352333-2355419 : negative

Gene Family Information

  • ID HOM05D003317
  • #Genes/#Species 206/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G06040.1
  • uniprot F4IIC2

Descriptions

  • Description F-box/LRR protein
  • Computational description CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins in 240 species: Archae - 0; Bacteria - 125; Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IMP
Gene Ontologynucleotide-excision repair1
GO:0010225
IMP
Gene Ontologyresponse to UV-C1
GO:0031146
IBA
Gene OntologySCF-dependent proteasomal ubiquitin-dependent protein catabolic process2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0019005
IBA
Gene OntologySCF ubiquitin ligase complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR006553 Leucine-rich repeat, cysteine-containing subtype
Mapman id Description
35.1 not assigned.annotated