Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g175320 Pisum sativum HOM05D001092 ORTHO05D000923 1.3e-145 519.6 239 100.0
TPR.G33938 Trifolium pratense HOM05D001092 ORTHO05D000923 2.1e-84 316.2 193 76.7
Medtr5g013780 Medicago truncatula HOM05D001092 ORTHO05D000923 1.5e-82 310.1 193 74.6
Ca_24624_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 7.5e-82 307.8 148 92.6
Lalb_Chr16g0379281 Lupinus albus HOM05D001092 ORTHO05D000923 3.6e-76 288.9 193 69.4
Lj2g0026983 Lotus japonicus HOM05D001092 ORTHO05D000923 6.4e-73 278.1 209 64.1
Phvul.002G003000 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 1.4e-72 276.9 194 67.0
VMungo1215G1951 Vigna mungo HOM05D001092 ORTHO05D000923 1.6e-71 273.5 159 77.4
arahy.Tifrunner.gnm1.ann1.G3NGVJ Arachis hypogaea HOM05D001092 ORTHO05D000923 2.0e-71 273.1 193 67.9
arahy.Tifrunner.gnm1.ann1.PHJ2IJ Arachis hypogaea HOM05D001092 ORTHO05D000923 2.0e-71 273.1 193 67.9
FAN08G1156 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.0e-70 269.2 150 77.3
FAN18G3751 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.0e-70 269.2 150 76.7
FAN04G0578 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.9e-70 268.9 150 76.7
FAN13G3119 Fragaria x ananassa HOM05D001092 ORTHO05D000923 5.0e-70 268.5 150 76.7
FvH4_5g20820 Fragaria vesca HOM05D001092 ORTHO05D000923 1.9e-69 266.5 150 76.7
RcHm_v2.0_Chr7g0207821 Rosa chinensis HOM05D001092 ORTHO05D000923 5.6e-69 265.0 150 76.0
TWI60G0589 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 8.0e-68 261.2 147 78.2
Prupe.5G050700 Prunus persica HOM05D001092 ORTHO05D000923 1.1e-67 260.8 150 74.0
MD04G1057200 Malus domestica HOM05D001092 ORTHO05D000923 3.4e-66 255.8 150 74.7
Actinidia25929 Actinidia chinensis HOM05D001092 ORTHO05D000923 5.8e-66 255.0 149 71.1
ClCG09G012520 Citrullus lanatus HOM05D001092 ORTHO05D000923 5.8e-66 255.0 148 74.3
Ciclev10018424m.g Citrus clementina HOM05D001092 ORTHO05D000923 2.2e-65 253.1 150 74.7
PGR031G0629 Punica granatum HOM05D001092 ORTHO05D000923 2.2e-65 253.1 150 72.7
Potri.001G148800 Populus trichocarpa HOM05D001092 ORTHO05D000923 4.9e-65 251.9 153 73.2
CiPaw.12G058300 Carya illinoinensis HOM05D001092 ORTHO05D000923 1.1e-64 250.8 150 72.0
Sed0007068 Sechium edule HOM05D001092 ORTHO05D000923 1.1e-64 250.8 150 72.0
QL12p007950 Quercus lobata HOM05D001092 ORTHO05D000923 1.4e-64 250.4 150 74.0
Cpa.g.sc98.40 Carica papaya HOM05D001092 ORTHO05D000923 1.9e-64 250.0 149 72.5
Manes.17G019783 Manihot esculenta HOM05D001092 ORTHO05D000923 1.9e-64 250.0 145 74.5
MELO3C003359.2 Cucumis melo HOM05D001092 ORTHO05D000923 4.1e-64 248.8 148 72.3
Lj2A251T58 Lonicera japonica HOM05D001092 ORTHO05D000923 5.4e-64 248.4 149 71.1
CANSAT21G2480 Cannabis sativa HOM05D001092 ORTHO05D000923 7.0e-64 248.1 160 68.8
COL.COLO4_06704 Corchorus olitorius HOM05D001092 ORTHO05D000923 1.2e-63 247.3 150 73.3
CsaV3_3G049680 Cucumis sativus L. HOM05D001092 ORTHO05D000923 1.2e-63 247.3 146 72.6
Gohir.A08G161600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.2e-63 247.3 151 73.5
CSS0013829 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.6e-63 246.9 150 70.7
Cfa012359 Carpinus fangiana HOM05D001092 ORTHO05D000923 1.6e-63 246.9 150 72.7
Thhalv10024176m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 1.6e-63 246.9 142 71.8
CSS0028347 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 2.0e-63 246.5 150 70.0
MD06G1043800 Malus domestica HOM05D001092 ORTHO05D000923 2.7e-63 246.1 150 71.3
Sopen08g026080 Solanum pennellii HOM05D001092 ORTHO05D000923 2.7e-63 246.1 149 69.1
CARHR223710 Cardamine hirsuta HOM05D001092 ORTHO05D000923 4.6e-63 245.4 142 71.8
Gohir.D08G181600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 6.0e-63 245.0 151 72.8
Gorai.004G190500 Gossypium raimondii HOM05D001092 ORTHO05D000923 6.0e-63 245.0 151 72.8
Solyc08g077500.4 Solanum lycopersicum HOM05D001092 ORTHO05D000923 6.0e-63 245.0 149 68.5
Atru.chr9.1145 Acer truncatum HOM05D001092 ORTHO05D000923 7.8e-63 244.6 149 72.5
AL7G37590 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 1.0e-62 244.2 142 72.5
Duzib205G0058 Durio zibethinus HOM05D001092 ORTHO05D000923 1.0e-62 244.2 142 75.4
Eucgr.D02142 Eucalyptus grandis HOM05D001092 ORTHO05D000923 1.0e-62 244.2 150 68.0
BcaC07g38039 Brassica carinata HOM05D001092 ORTHO05D000923 1.3e-62 243.8 142 72.5
A08p12890 Brassica napus HOM05D001092 ORTHO05D000923 1.3e-62 243.8 142 72.5
BolC8t48437H Brassica oleracea HOM05D001092 ORTHO05D000923 1.3e-62 243.8 142 72.5
BraA08t33273Z Brassica rapa HOM05D001092 ORTHO05D000923 1.3e-62 243.8 142 72.5
Carub.0007s2427 Capsella rubella HOM05D001092 ORTHO05D000923 1.3e-62 243.8 142 71.1
Nitab4.5_0001255g0080 Nicotiana tabacum HOM05D001092 ORTHO05D000923 1.7e-62 243.4 149 69.8
Sp7g17050 Schrenkiella parvula HOM05D001092 ORTHO05D000923 3.9e-62 242.3 142 71.1
Aa31LG2G13220 Aethionema arabicum HOM05D001092 ORTHO05D000923 5.0e-62 241.9 142 71.8
Sabra01G0118800 Salix brachista HOM05D001092 ORTHO05D000923 6.6e-62 241.5 169 65.1
AT4G17140 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 1.1e-61 240.7 142 71.8
Dinv28897 Davidia involucrata HOM05D001092 ORTHO05D000923 1.1e-61 240.7 149 69.8
Nitab4.5_0006135g0030 Nicotiana tabacum HOM05D001092 ORTHO05D000923 1.1e-61 240.7 149 68.5
Oeu035103.1 Olea europaea HOM05D001092 ORTHO05D000923 1.5e-61 240.4 185 61.6
CAN.G1445.7 Capsicum annuum HOM05D001092 ORTHO05D000923 1.9e-61 240.0 149 67.1
Sc07g0009000 Simmondsia chinensis HOM05D001092 ORTHO05D000923 5.6e-61 238.4 150 68.7
Peaxi162Scf00084g00118 Petunia axillaris HOM05D001092 ORTHO05D000923 9.5e-61 237.7 149 66.4
GSVIVG01013270001 Vitis vinifera HOM05D001092 ORTHO05D000923 1.2e-60 237.3 149 69.1
Gohir.A03G003300 Gossypium hirsutum HOM05D001092 ORTHO05D000923 2.1e-60 236.5 149 66.4
Gorai.003G179200 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.4e-59 233.8 142 67.6
Thecc.03G236900 Theobroma cacao HOM05D001092 ORTHO05D000923 1.4e-59 233.8 142 69.7
Cc08_g01550 Coffea canephora HOM05D001092 ORTHO05D000923 3.1e-59 232.6 142 71.8
Gohir.D03G169032 Gossypium hirsutum HOM05D001092 ORTHO05D000923 5.2e-59 231.9 142 66.9
MSTRG.1961 Avicennia marina HOM05D001092 ORTHO05D000923 2.6e-58 229.6 150 68.0
PSO063G3710 Papaver somniferum HOM05D001092 ORTHO05D000923 2.6e-58 229.6 157 64.3
EL10Ac5g12216 Beta vulgaris HOM05D001092 ORTHO05D000923 4.4e-58 228.8 143 67.8
SHI07576 Sapria himalayana HOM05D001092 ORTHO05D000923 4.4e-58 228.8 141 68.8
HanXRQChr17g0535661 Helianthus annuus HOM05D001092 ORTHO05D000923 5.8e-58 228.4 142 69.7
Aqoxy3G02588 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 3.7e-57 225.7 142 67.6
Migut.E00810 Erythranthe guttata HOM05D001092 ORTHO05D000923 6.4e-57 224.9 148 67.6
Hund14463 Selenicereus undatus HOM05D001092 ORTHO05D000923 6.4e-57 224.9 157 64.3
AUR62007201 Chenopodium quinoa HOM05D001092 ORTHO05D000923 7.1e-56 221.5 150 65.3
MBI04_g20743_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 7.1e-56 221.5 142 63.4
SGA_v2.0_scaffold20G09243 Striga asiatica HOM05D001092 ORTHO05D000923 9.2e-56 221.1 144 66.7
DCAR_000729 Daucus carota HOM05D001092 ORTHO05D000923 1.6e-55 220.3 142 68.3
AUR62018801 Chenopodium quinoa HOM05D001092 ORTHO05D000923 2.1e-55 219.9 150 64.7
unitig_21.g20375 Utricularia gibba HOM05D001092 ORTHO05D000923 2.7e-55 219.5 142 67.6
Lsat_1_v5_gn_3_15901 Lactuca sativa HOM05D001092 ORTHO05D000923 7.8e-55 218.0 142 65.5
ECA246G3294 Erigeron canadensis HOM05D001092 ORTHO05D000923 8.6e-54 214.5 143 63.6
ATR0829G162 Amborella trichopoda HOM05D001092 ORTHO05D000923 1.5e-53 213.8 140 64.3
Ah.12g053800 Amaranthus hybridus HOM05D001092 ORTHO05D000923 3.3e-53 212.6 142 59.9
CDE02G0574 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 1.4e-51 207.2 142 59.9
HPP92_014878 Vanilla planifolia HOM05D001092 ORTHO05D000923 1.2e-50 204.1 201 47.3
ECA238G3986 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.5e-50 203.8 143 60.8
SEGI_12695 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 4.1e-48 195.7 143 56.6
THA.LOC104814451 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 4.1e-48 195.7 121 69.4
Os10g0565300 Oryza sativa ssp. japonica HOM05D001092 ORTHO05D000923 3.0e-46 189.5 210 46.2
Zm00001eb390790 Zea mays HOM05D001092 ORTHO05D000923 4.3e-45 185.7 140 55.7
Rhsim02G0045600 Rhododendron simsii HOM05D001092 ORTHO05D000923 4.0e-43 179.1 110 68.2
AagrBONN_evm.TU.Sc2ySwM_362.876 Anthoceros agrestis HOM05D001092 ORTHO05D000923 5.6e-37 158.7 140 50.7
Mapoly0105s0039 Marchantia polymorpha HOM05D001092 ORTHO05D000923 1.6e-36 157.1 146 45.9
Pp3c18_1370 Physcomitrium patens HOM05D001092 ORTHO05D000923 7.9e-31 138.3 143 43.4
Pp3c18_1376 Physcomitrium patens HOM05D001092 ORTHO05D000923 7.9e-31 138.3 143 43.4
SEGI_02242 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 5.1e-30 135.6 95 57.9
Pp3c22_21110 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.3e-28 131.0 141 44.0
SMO356G0258 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 3.8e-25 119.4 130 46.9
SEGI_16723 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 6.2e-20 102.1 135 37.0
AagrBONN_evm.TU.Sc2ySwM_362.1818 Anthoceros agrestis HOM05D001092 ORTHO05D000923 1.1e-19 101.3 128 36.7
Mapoly0076s0037 Marchantia polymorpha HOM05D001092 ORTHO05D000923 2.2e-17 93.6 129 34.9
SMO240G0011 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.5e-16 90.1 111 37.8
Pp3c9_20320 Physcomitrium patens HOM05D001092 ORTHO05D000923 4.2e-16 89.4 138 31.2
SMO340G0042 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 4.2e-16 89.4 130 33.8
HPP92_014922 Vanilla planifolia HOM05D001092 ORTHO05D000923 1.6e-15 87.4 169 31.4
Cpa.g.sc98.46 Carica papaya HOM05D001092 ORTHO05D000923 9.7e-13 78.2 128 34.4
Atru.chr9.1144 Acer truncatum HOM05D001092 ORTHO05D000923 1.3e-12 77.8 121 34.7
CBR_g4878 Chara braunii HOM05D001092 ORTHO05D000923 1.3e-12 77.8 139 32.4
CAN.G1445.6 Capsicum annuum HOM05D001092 ORTHO05D000923 6.3e-12 75.5 117 32.5
Haze_08330 Corylus avellana HOM05D001092 ORTHO05D000923 2.4e-11 73.6 117 31.6
Gohir.D03G169100 Gossypium hirsutum HOM05D001092 ORTHO05D000923 4.1e-11 72.8 119 32.8
Psat2g175240 Pisum sativum HOM05D001092 ORTHO05D000923 6.9e-11 72.0 119 33.6
A08p12900 Brassica napus HOM05D001092 ORTHO05D000923 9.0e-11 71.6 128 35.2
Ca_26022_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 2.0e-10 70.5 119 33.6
TAR629G2120 Trochodendron aralioides HOM05D001092 ORTHO05D000923 2.0e-10 70.5 114 32.5
Cre12.g483500 Chlamydomonas reinhardtii HOM05D001092 ORTHO05D000923 4.5e-10 69.3 164 29.3
Lj2A251G48 Lonicera japonica HOM05D001092 ORTHO05D000923 5.9e-10 68.9 118 31.4
Nn1g00699 Nelumbo nucifera HOM05D001092 ORTHO05D000923 5.9e-10 68.9 139 30.2
Glyma.11G039900 Glycine max HOM05D001092 ORTHO05D000923 1.0e-09 68.2 119 31.1
Rhsim11G0008400 Rhododendron simsii HOM05D001092 ORTHO05D000923 1.7e-09 67.4 118 32.2
Rhsim11G0008500 Rhododendron simsii HOM05D001092 ORTHO05D000923 6.5e-09 65.5 40 67.5
Oeu007576.1 Olea europaea HOM05D001092 ORTHO05D000923 1.4e-08 64.3 119 30.3
Thecc.04G308400 Theobroma cacao HOM05D001092 ORTHO05D000923 1.4e-08 64.3 147 30.6
Lalb_Chr13g0298791 Lupinus albus HOM05D001092 ORTHO05D000923 4.2e-08 62.8 151 30.5
Lalb_Chr12g0200731 Lupinus albus HOM05D001092 ORTHO05D000923 1.2e-07 61.2 147 29.9
Lj4g0014122 Lotus japonicus HOM05D001092 ORTHO05D000923 1.6e-07 60.8 145 29.7
MD16G1156400 Malus domestica HOM05D001092 ORTHO05D000923 1.6e-07 60.8 147 29.9
SEGI_28116 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 1.6e-07 60.8 126 32.5
SalBow8G3461 Salvia bowleyana HOM05D001092 ORTHO05D000923 3.6e-07 59.7 147 30.6
TPR.G12636 Trifolium pratense HOM05D001092 ORTHO05D000923 3.6e-07 59.7 145 27.6
vmacro07983 Vaccinium macrocarpon HOM05D001092 ORTHO05D000923 3.6e-07 59.7 147 29.9
PGR004G1484 Punica granatum HOM05D001092 ORTHO05D000923 6.1e-07 58.9 147 29.3
QL06p013490 Quercus lobata HOM05D001092 ORTHO05D000923 6.1e-07 58.9 147 29.9
arahy.Tifrunner.gnm1.ann1.NU1CTT Arachis hypogaea HOM05D001092 ORTHO05D000923 7.9e-07 58.5 151 28.5
HanXRQChr01g0031031 Helianthus annuus HOM05D001092 ORTHO05D000923 7.9e-07 58.5 147 29.9
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 7.9e-07 58.5 143 31.5
Phvul.003G119100 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 1.0e-06 58.2 147 28.6
THA.LOC104802610 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 1.0e-06 58.2 147 29.3
Aa31LG10G5640 Aethionema arabicum HOM05D001092 ORTHO05D000923 1.4e-06 57.8 147 29.3
Cc03_g00400 Coffea canephora HOM05D001092 ORTHO05D000923 1.4e-06 57.8 147 29.3
Atru.chr4.3076 Acer truncatum HOM05D001092 ORTHO05D000923 1.8e-06 57.4 148 29.1
CDE02G4159 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 2.3e-06 57.0 137 27.0
Rhsim04G0245300 Rhododendron simsii HOM05D001092 ORTHO05D000923 2.3e-06 57.0 148 30.4
Glyma.07G233100 Glycine max HOM05D001092 ORTHO05D000923 3.0e-06 56.6 145 27.6
COL.COLO4_06705 Corchorus olitorius HOM05D001092 ORTHO05D000923 3.9e-06 56.2 85 32.9
Haze_00820 Corylus avellana HOM05D001092 ORTHO05D000923 5.1e-06 55.8 152 29.6
Sp1g35040 Schrenkiella parvula HOM05D001092 ORTHO05D000923 5.1e-06 55.8 144 29.9
Lsat_1_v5_gn_1_40321 Lactuca sativa HOM05D001092 ORTHO05D000923 6.7e-06 55.5 147 27.2
MD13G1146800 Malus domestica HOM05D001092 ORTHO05D000923 6.7e-06 55.5 151 28.5
GSVIVG01017643001 Vitis vinifera HOM05D001092 ORTHO05D000923 6.7e-06 55.5 130 29.2
BcaC07g37172 Brassica carinata HOM05D001092 ORTHO05D000923 8.8e-06 55.1 139 30.2
A08p05240 Brassica napus HOM05D001092 ORTHO05D000923 8.8e-06 55.1 139 30.2
C08p05520 Brassica napus HOM05D001092 ORTHO05D000923 8.8e-06 55.1 139 30.2
BraA08t32540Z Brassica rapa HOM05D001092 ORTHO05D000923 8.8e-06 55.1 139 30.2


User provided reference genes

Program Settings