Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 9.5e-119 430.3 227 100.0
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 2.6e-108 395.6 227 93.0
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 1.3e-107 393.3 227 91.6
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 1.9e-106 389.4 227 90.3
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.5e-100 369.8 227 85.9
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 2.6e-100 369.0 227 86.3
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 7.6e-100 367.5 227 85.0
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 7.6e-100 367.5 227 85.5
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 6.4e-99 364.4 225 85.8
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 6.4e-99 364.4 225 85.8
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 6.4e-99 364.4 225 85.8
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 3.3e-95 352.1 228 83.3
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 5.6e-95 351.3 226 81.0
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 6.2e-94 347.8 228 82.5
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 4.4e-92 341.7 225 78.7
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 1.3e-91 340.1 227 77.5
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 2.2e-91 339.3 227 76.2
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 1.4e-90 336.7 227 76.2
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 5.4e-90 334.7 227 77.5
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 5.4e-90 334.7 227 76.2
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 9.3e-90 334.0 224 76.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 6.0e-89 331.3 227 76.2
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 3.0e-88 328.9 227 76.7
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 3.9e-88 328.6 227 76.7
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 5.1e-88 328.2 227 76.2
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 8.7e-88 327.4 227 76.2
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 1.9e-87 326.2 227 75.3
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.9e-87 326.2 227 75.3
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 2.5e-87 325.9 227 75.3
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.3e-87 325.1 227 75.8
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 9.6e-87 323.9 227 74.9
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 1.6e-86 323.2 227 75.8
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 2.8e-86 322.4 227 74.0
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 4.8e-86 321.6 217 79.7
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 6.2e-86 321.2 221 75.1
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 1.1e-85 320.5 227 74.0
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 1.8e-85 319.7 227 75.3
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.8e-85 319.7 227 73.6
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 3.1e-85 318.9 227 73.1
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 1.2e-84 317.0 225 72.9
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 1.5e-84 316.6 227 72.7
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 1.5e-84 316.6 227 73.6
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 2.0e-84 316.2 227 73.6
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 3.4e-84 315.5 224 71.9
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 5.8e-84 314.7 224 71.9
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 7.6e-84 314.3 227 73.1
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 7.6e-84 314.3 227 72.7
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 9.9e-84 313.9 227 74.0
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.7e-83 313.2 225 72.9
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.7e-83 313.2 224 70.5
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 3.8e-83 312.0 225 71.6
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 8.4e-83 310.8 227 72.2
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 8.4e-83 310.8 227 70.9
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.4e-82 310.1 225 72.9
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 1.4e-82 310.1 237 68.8
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.9e-82 309.7 224 71.9
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 3.2e-82 308.9 227 70.5
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 3.2e-82 308.9 227 70.5
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 5.4e-82 308.1 227 70.5
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 5.4e-82 308.1 242 69.0
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 9.3e-82 307.4 227 70.9
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 2.7e-81 305.8 227 70.5
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 6.0e-81 304.7 225 71.1
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.0e-80 303.9 250 64.4
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 1.3e-80 303.5 227 70.0
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 3.0e-80 302.4 224 70.1
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 3.9e-80 302.0 210 74.8
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 6.7e-80 301.2 227 69.6
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 6.7e-80 301.2 260 63.8
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 8.7e-80 300.8 221 70.6
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 3.3e-79 298.9 207 74.9
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 5.6e-79 298.1 267 61.8
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 1.6e-78 296.6 227 68.7
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 1.6e-78 296.6 227 68.7
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 2.1e-78 296.2 225 70.7
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 8.1e-78 294.3 227 68.3
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 8.1e-78 294.3 227 68.3
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 8.1e-78 294.3 227 68.3
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.4e-77 293.5 234 67.5
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 4.0e-77 292.0 210 72.4
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 4.0e-77 292.0 227 69.6
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 5.3e-77 291.6 227 69.2
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.5e-76 290.0 224 68.3
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 3.8e-75 285.4 225 68.4
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 4.9e-75 285.0 224 68.8
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 6.5e-75 284.6 227 66.1
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 1.9e-74 283.1 241 64.7
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 5.5e-74 281.6 227 68.7
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 9.3e-74 280.8 194 76.8
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 3.5e-73 278.9 224 67.4
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 1.0e-72 277.3 227 65.6
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.0e-72 277.3 203 71.4
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.5e-71 273.5 227 66.5
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 6.9e-69 264.6 195 72.3
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 5.0e-67 258.5 222 62.2
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 2.5e-66 256.1 198 68.7
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 7.1e-66 254.6 214 62.6
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 2.3e-64 249.6 207 62.8
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.1e-63 247.3 193 67.9
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 2.8e-62 242.7 222 59.0
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 2.8e-62 242.7 222 59.0
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 6.3e-62 241.5 222 58.6
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 5.9e-60 235.0 223 57.8
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 7.9e-57 224.6 221 55.2
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 8.2e-54 214.5 218 53.2
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 1.4e-48 197.2 213 51.6
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 1.8e-45 186.8 139 69.8
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 6.5e-43 178.3 159 64.2
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 1.8e-37 160.2 196 45.9
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 8.5e-35 151.4 210 47.1
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.0e-28 130.2 163 50.3
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.0e-27 127.9 99 68.7
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 2.2e-27 126.7 95 66.3
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 7.5e-15 85.1 220 28.2
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 8.3e-14 81.6 194 29.9
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 1.5e-10 70.9 109 47.7
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 4.7e-09 65.9 210 33.3
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 6.2e-09 65.5 218 26.1
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 6.4e-06 55.5 35 77.1


User provided reference genes

Program Settings