Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g086480 Pisum sativum HOM05D003926 ORTHO05D005273 2.4e-81 305.4 153 100.0
Psat3g203080 Pisum sativum HOM05D003926 ORTHO05D005273 4.2e-54 214.9 114 95.6
TPR.G23405 Trifolium pratense HOM05D003926 ORTHO05D005273 5.2e-52 208.0 114 91.2
Ca_06914_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 4.4e-51 204.9 114 88.6
Ca_06916_v3 Cicer arietinum L. HOM05D003926 ORTHO05D005273 4.4e-51 204.9 114 88.6
Lj1g0000156 Lotus japonicus HOM05D003926 ORTHO05D005273 1.7e-50 203.0 114 88.6
Lj1g0024205 Lotus japonicus HOM05D003926 ORTHO05D005273 1.7e-50 203.0 114 88.6
Medtr7g017100 Medicago truncatula HOM05D003926 ORTHO05D005273 2.8e-50 202.2 120 85.0
Glyma.18G275200 Glycine max HOM05D003926 ORTHO05D005273 8.3e-50 200.7 114 86.8
Lalb_Chr21g0318281 Lupinus albus HOM05D003926 ORTHO05D005273 8.3e-50 200.7 114 87.7
arahy.Tifrunner.gnm1.ann1.FDTJ9Q Arachis hypogaea HOM05D003926 ORTHO05D005273 1.4e-49 199.9 114 86.8
arahy.Tifrunner.gnm1.ann1.IQIT5J Arachis hypogaea HOM05D003926 ORTHO05D005273 1.4e-49 199.9 114 86.8
Psat7g201760 Pisum sativum HOM05D003926 ORTHO05D005273 1.8e-49 199.5 114 87.7
Ciclev10010885m.g Citrus clementina HOM05D003926 ORTHO05D005273 2.4e-49 199.1 114 84.2
CiPaw.03G082600 Carya illinoinensis HOM05D003926 ORTHO05D005273 7.0e-49 197.6 127 78.7
Phvul.008G025700 Phaseolus vulgaris HOM05D003926 ORTHO05D005273 9.1e-49 197.2 114 86.0
Atru.chr8.620 Acer truncatum HOM05D003926 ORTHO05D005273 2.0e-48 196.1 114 82.5
Lj4C124T8 Lonicera japonica HOM05D003926 ORTHO05D005273 6.5e-47 191.0 114 78.9
QL02p065183 Quercus lobata HOM05D003926 ORTHO05D005273 8.5e-47 190.7 114 80.7
Cfa007698 Carpinus fangiana HOM05D003926 ORTHO05D005273 1.1e-46 190.3 114 80.7
COL.COLO4_10659 Corchorus olitorius HOM05D003926 ORTHO05D005273 1.1e-46 190.3 142 69.0
Haze_14378 Corylus avellana HOM05D003926 ORTHO05D005273 1.1e-46 190.3 114 80.7
TWI32G0285 Tripterygium wilfordii HOM05D003926 ORTHO05D005273 2.5e-46 189.1 114 78.1
Gohir.D07G186000 Gossypium hirsutum HOM05D003926 ORTHO05D005273 3.2e-46 188.7 114 79.8
Gorai.001G206500 Gossypium raimondii HOM05D003926 ORTHO05D005273 3.2e-46 188.7 114 79.8
Psat1g100800 Pisum sativum HOM05D003926 ORTHO05D005273 5.5e-46 188.0 114 82.5
Thecc.04G107500 Theobroma cacao HOM05D003926 ORTHO05D005273 5.5e-46 188.0 142 69.0
Dinv33870 Davidia involucrata HOM05D003926 ORTHO05D005273 7.2e-46 187.6 114 78.1
Sabra17G0086900 Salix brachista HOM05D003926 ORTHO05D005273 9.4e-46 187.2 114 77.2
Duzib211G0130 Durio zibethinus HOM05D003926 ORTHO05D005273 1.6e-45 186.4 142 67.6
Potri.017G101100 Populus trichocarpa HOM05D003926 ORTHO05D005273 1.6e-45 186.4 114 77.2
Prupe.3G248400 Prunus persica HOM05D003926 ORTHO05D005273 1.6e-45 186.4 114 77.2
FvH4_6g46320 Fragaria vesca HOM05D003926 ORTHO05D005273 3.6e-45 185.3 114 77.2
Gohir.A07G178700 Gossypium hirsutum HOM05D003926 ORTHO05D005273 3.6e-45 185.3 114 78.1
Gohir.A07G179100 Gossypium hirsutum HOM05D003926 ORTHO05D005273 3.6e-45 185.3 114 78.1
Lalb_Chr06g0174881 Lupinus albus HOM05D003926 ORTHO05D005273 6.1e-45 184.5 114 80.7
Rhsim10G0059600 Rhododendron simsii HOM05D003926 ORTHO05D005273 6.1e-45 184.5 114 74.6
RcHm_v2.0_Chr2g0164791 Rosa chinensis HOM05D003926 ORTHO05D005273 1.0e-44 183.7 114 77.2
Dinv34905 Davidia involucrata HOM05D003926 ORTHO05D005273 1.8e-44 183.0 114 76.3
CANSAT64G0948 Cannabis sativa HOM05D003926 ORTHO05D005273 2.3e-44 182.6 127 71.7
MD09G1075600 Malus domestica HOM05D003926 ORTHO05D005273 2.3e-44 182.6 120 74.2
Hund16238 Selenicereus undatus HOM05D003926 ORTHO05D005273 3.0e-44 182.2 114 78.1
Actinidia18083 Actinidia chinensis HOM05D003926 ORTHO05D005273 6.8e-44 181.0 114 75.4
HanXRQChr15g0464821 Helianthus annuus HOM05D003926 ORTHO05D005273 8.8e-44 180.6 114 75.4
Manes.02G059900 Manihot esculenta HOM05D003926 ORTHO05D005273 8.8e-44 180.6 114 77.2
CSS0002647 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 1.2e-43 180.3 114 74.6
CSS0025257 Camellia sinensis var. sinensis HOM05D003926 ORTHO05D005273 1.2e-43 180.3 114 74.6
Duzib133G0169 Durio zibethinus HOM05D003926 ORTHO05D005273 1.2e-43 180.3 114 78.1
ClCG11G004990 Citrullus lanatus HOM05D003926 ORTHO05D005273 1.5e-43 179.9 114 75.4
MD17G1066300 Malus domestica HOM05D003926 ORTHO05D005273 5.7e-43 177.9 114 75.4
MELO3C022053.2 Cucumis melo HOM05D003926 ORTHO05D005273 7.5e-43 177.6 114 74.6
CsaV3_5G038720 Cucumis sativus L. HOM05D003926 ORTHO05D005273 7.5e-43 177.6 114 74.6
AUR62009475 Chenopodium quinoa HOM05D003926 ORTHO05D005273 9.8e-43 177.2 114 75.4
AUR62023153 Chenopodium quinoa HOM05D003926 ORTHO05D005273 9.8e-43 177.2 114 74.6
vmacro05610 Vaccinium macrocarpon HOM05D003926 ORTHO05D005273 1.7e-42 176.4 114 71.9
Sed0020046 Sechium edule HOM05D003926 ORTHO05D005273 2.2e-42 176.0 114 72.8
Peaxi162Scf00020g02342 Petunia axillaris HOM05D003926 ORTHO05D005273 2.8e-42 175.6 120 70.0
ECA232G4780 Erigeron canadensis HOM05D003926 ORTHO05D005273 6.3e-42 174.5 114 71.1
CAN.G497.55 Capsicum annuum HOM05D003926 ORTHO05D005273 1.4e-41 173.3 120 68.3
PGR004G0818 Punica granatum HOM05D003926 ORTHO05D005273 1.8e-41 172.9 114 71.9
Ah.16g101010 Amaranthus hybridus HOM05D003926 ORTHO05D005273 4.1e-41 171.8 114 72.8
DCAR_011007 Daucus carota HOM05D003926 ORTHO05D005273 4.1e-41 171.8 114 70.2
Lsat_1_v5_gn_4_173381 Lactuca sativa HOM05D003926 ORTHO05D005273 4.1e-41 171.8 114 71.1
Nn3g17538 Nelumbo nucifera HOM05D003926 ORTHO05D005273 4.1e-41 171.8 116 71.6
EL10Ac2g04434 Beta vulgaris HOM05D003926 ORTHO05D005273 1.2e-40 170.2 114 72.8
TAR374G0863 Trochodendron aralioides HOM05D003926 ORTHO05D005273 1.2e-40 170.2 115 72.2
MSTRG.23855 Avicennia marina HOM05D003926 ORTHO05D005273 1.6e-40 169.9 120 65.0
AT3G02260 Arabidopsis thaliana HOM05D003926 ORTHO05D005273 3.5e-40 168.7 114 67.5
Sopen02g034050 Solanum pennellii HOM05D003926 ORTHO05D005273 3.5e-40 168.7 120 66.7
PGSC0003DMG401001381 Solanum tuberosum HOM05D003926 ORTHO05D005273 4.5e-40 168.3 120 66.7
AL3G11530 Arabidopsis lyrata HOM05D003926 ORTHO05D005273 1.3e-39 166.8 114 66.7
Aqoxy3G03752 Aquilegia oxysepala HOM05D003926 ORTHO05D005273 1.7e-39 166.4 116 69.0
Sc14g0004890 Simmondsia chinensis HOM05D003926 ORTHO05D005273 1.7e-39 166.4 114 68.4
Cc07_g04520 Coffea canephora HOM05D003926 ORTHO05D005273 2.3e-39 166.0 120 65.8
ATR1101G059 Amborella trichopoda HOM05D003926 ORTHO05D005273 2.9e-39 165.6 116 68.1
CARHR076230 Cardamine hirsuta HOM05D003926 ORTHO05D005273 3.8e-39 165.2 114 66.7
Migut.H00584 Erythranthe guttata HOM05D003926 ORTHO05D005273 3.8e-39 165.2 127 61.4
A05p45150 Brassica napus HOM05D003926 ORTHO05D005273 5.0e-39 164.9 114 66.7
BraA05t23147Z Brassica rapa HOM05D003926 ORTHO05D005273 5.0e-39 164.9 114 66.7
THA.LOC104802985 Tarenaya hassleriana HOM05D003926 ORTHO05D005273 5.0e-39 164.9 114 68.4
C09p75640 Brassica napus HOM05D003926 ORTHO05D005273 6.6e-39 164.5 114 66.7
BolC5t35094H Brassica oleracea HOM05D003926 ORTHO05D005273 6.6e-39 164.5 114 66.7
Solyc02g089260.4 Solanum lycopersicum HOM05D003926 ORTHO05D005273 6.6e-39 164.5 120 65.8
PSO063G5950 Papaver somniferum HOM05D003926 ORTHO05D005273 8.6e-39 164.1 116 69.8
PSO782G5674 Papaver somniferum HOM05D003926 ORTHO05D005273 8.6e-39 164.1 116 69.8
SGA_v2.0_scaffold52G19072 Striga asiatica HOM05D003926 ORTHO05D005273 8.6e-39 164.1 120 65.0
Eucgr.I02068 Eucalyptus grandis HOM05D003926 ORTHO05D005273 1.1e-38 163.7 114 71.9
ATR0691G267 Amborella trichopoda HOM05D003926 ORTHO05D005273 1.5e-38 163.3 116 67.2
Thhalv10019869m.g Eutrema salsugineum HOM05D003926 ORTHO05D005273 1.5e-38 163.3 114 65.8
Aa31LG5G12790 Aethionema arabicum HOM05D003926 ORTHO05D005273 2.5e-38 162.5 114 64.9
Carub.0003s0138 Capsella rubella HOM05D003926 ORTHO05D005273 2.5e-38 162.5 114 65.8
MBI15_g05000_MAGBIO Magnolia biondii HOM05D003926 ORTHO05D005273 2.5e-38 162.5 116 69.0
Sp3g01330 Schrenkiella parvula HOM05D003926 ORTHO05D005273 4.3e-38 161.8 114 64.9
TAR622G1093 Trochodendron aralioides HOM05D003926 ORTHO05D005273 8.0e-37 157.5 114 68.4
SHI25822 Sapria himalayana HOM05D003926 ORTHO05D005273 1.4e-36 156.8 114 65.8
Os09g0247700 Oryza sativa ssp. japonica HOM05D003926 ORTHO05D005273 4.0e-36 155.2 116 62.1
GSVIVG01036538001 Vitis vinifera HOM05D003926 ORTHO05D005273 1.2e-35 153.7 91 81.3
Zm00001eb308350 Zea mays HOM05D003926 ORTHO05D005273 4.9e-34 148.3 117 58.1
CDE01G0304 Ceratophyllum demersum HOM05D003926 ORTHO05D005273 1.2e-32 143.7 116 59.5
SEGI_07483 Sequoiadendron giganteum HOM05D003926 ORTHO05D005273 3.9e-31 138.7 116 57.8
Psat4g186360 Pisum sativum HOM05D003926 ORTHO05D005273 3.2e-25 119.0 73 86.3
Pp3c7_7030 Physcomitrium patens HOM05D003926 ORTHO05D005273 2.0e-24 116.3 118 53.4
Pp3c11_22340 Physcomitrium patens HOM05D003926 ORTHO05D005273 2.8e-21 105.9 121 47.9
Mapoly0031s0115 Marchantia polymorpha HOM05D003926 ORTHO05D005273 1.4e-20 103.6 98 51.0
Psat7g201680 Pisum sativum HOM05D003926 ORTHO05D005273 1.4e-20 103.6 114 54.4
SMO361G0659 Selaginella moellendorffii HOM05D003926 ORTHO05D005273 6.4e-18 94.7 98 48.0
Glyma.08G252600 Glycine max HOM05D003926 ORTHO05D005273 2.5e-14 82.8 49 83.7
AagrBONN_evm.TU.Sc2ySwM_344.3761 Anthoceros agrestis HOM05D003926 ORTHO05D005273 3.6e-13 79.0 82 48.8
CBR_g24086 Chara braunii HOM05D003926 ORTHO05D000048 1.1e-12 77.4 115 38.3
Rhsim05G0129300 Rhododendron simsii HOM05D003926 ORTHO05D005273 6.4e-10 68.2 46 67.4


User provided reference genes

Program Settings