Gene: AT3G02260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G02260
  • Transcript Identifier AT3G02260.2
  • Gene Type Coding gene
  • Location Chr3 : 431152-448489 : negative

Gene Family Information

  • ID HOM05D003926
  • #Genes/#Species 177/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G02260.2
  • symbol BIG
  • Alias ASA1,ATTENUATED SHADE AVOIDANCE 1,CRM1,CORYMBOSA1,DOC1,DARK OVER-EXPRESSION OF CAB 1,LPR1,LOW PHOSPHATE-RESISTANT ROOT 1,TIR3,TRANSPORT INHIBITOR RESPONSE 3,UMB1,UMBRELLA 1
  • uniprot Q9SRU2

Descriptions

  • Description auxin transport protein (BIG)
  • Computational description BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009640
IMP
Gene Ontologyphotomorphogenesis1
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0009926
IDA
IBA
Gene Ontologyauxin polar transport2 3
GO:0009620
IMP
Gene Ontologyresponse to fungus4
GO:0048281
IMP
Gene Ontologyinflorescence morphogenesis5
GO:0009826
IMP
Gene Ontologyunidimensional cell growth5
GO:0048364
IMP
Gene Ontologyroot development6
GO:0010311
IMP
Gene Ontologylateral root formation6
GO:0009733
IMP
Gene Ontologyresponse to auxin2
GO:0048283
IMP
Gene Ontologyindeterminate inflorescence morphogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
IBA
Gene Ontologyplasmodesma3 7
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
IBA
Gene Ontologycytosol3 8
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000433 Zinc finger, ZZ-type
IPR043145 Zinc finger, ZZ-type superfamily
IPR003126 Zinc finger, UBR-type
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
IPR036322 WD40-repeat-containing domain superfamily
IPR025704 E3 ubiquitin ligase, UBR4
Mapman id Description
11.2.4.1.3 Phytohormone action.auxin.transport.polar auxin transport.regulatory protein (BIG)