Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g065680 Pisum sativum HOM05D003492 ORTHO05D005115 5.2e-66 254.2 126 100.0
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 1.3e-56 223.0 122 86.9
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 5.9e-54 214.2 122 83.6
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 3.3e-52 208.4 122 82.0
Ca_30996_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 3.3e-52 208.4 122 82.0
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 5.6e-52 207.6 122 80.3
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 1.6e-46 189.5 122 73.8
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 1.9e-44 182.6 122 71.3
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 4.3e-44 181.4 122 70.5
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 4.3e-44 181.4 122 70.5
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 4.0e-42 174.9 122 68.9
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 5.2e-42 174.5 122 69.7
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.2e-41 173.3 122 68.0
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 9.2e-39 163.7 144 59.0
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 9.2e-39 163.7 122 62.3
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 1.2e-38 163.3 122 61.5
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 1.2e-38 163.3 122 60.7
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 3.0e-37 158.7 122 59.8
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 3.0e-37 158.7 122 60.7
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 8.6e-37 157.1 122 59.0
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 8.6e-37 157.1 122 59.0
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 8.6e-37 157.1 122 59.8
CiPaw.01G300100 Carya illinoinensis HOM05D003492 ORTHO05D005115 1.5e-36 156.4 122 58.2
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 1.5e-36 156.4 122 62.3
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 1.5e-36 156.4 122 58.2
TAR623G0911 Trochodendron aralioides HOM05D003492 ORTHO05D005115 2.5e-36 155.6 122 59.8
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 4.3e-36 154.8 122 62.3
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 1.2e-35 153.3 122 61.5
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 1.2e-35 153.3 122 57.4
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 2.8e-35 152.1 122 59.8
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 3.6e-35 151.8 122 58.2
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 6.2e-35 151.0 123 56.9
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 8.1e-35 150.6 120 59.2
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 8.1e-35 150.6 122 58.2
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 1.4e-34 149.8 122 56.6
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 1.8e-34 149.4 122 58.2
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 5.2e-34 147.9 122 59.8
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 1.2e-33 146.7 123 56.1
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 2.6e-33 145.6 122 58.2
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 2.6e-33 145.6 122 55.7
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 4.4e-33 144.8 119 58.0
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 5.8e-33 144.4 121 57.9
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 7.6e-33 144.1 124 55.6
FAN03G1608 Fragaria x ananassa HOM05D003492 ORTHO05D005115 9.9e-33 143.7 120 57.5
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 1.3e-32 143.3 123 54.5
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 1.3e-32 143.3 120 57.5
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.7e-32 142.9 120 57.5
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.7e-32 142.9 120 57.5
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.7e-32 142.9 120 57.5
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 2.2e-32 142.5 122 54.9
CAN.G78.68 Capsicum annuum HOM05D003492 ORTHO05D005115 2.2e-32 142.5 121 53.7
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 2.2e-32 142.5 123 56.1
Duzib114G0096 Durio zibethinus HOM05D003492 ORTHO05D005115 2.9e-32 142.1 122 54.9
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 3.7e-32 141.7 122 52.5
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 1.9e-31 139.4 123 52.0
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.4e-31 139.0 121 53.7
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 4.1e-31 138.3 119 53.8
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 4.1e-31 138.3 122 50.8
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 9.2e-31 137.1 114 55.3
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 4.6e-30 134.8 118 52.5
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 1.0e-29 133.7 118 52.5
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 1.3e-29 133.3 124 53.2
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 7.3e-28 127.5 124 53.2
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 7.3e-28 127.5 126 51.6
Hma1.2p1_0235F.1_g098570 Hydrangea macrophylla HOM05D003492 ORTHO05D005115 2.8e-27 125.6 150 46.0
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 3.6e-27 125.2 126 51.6
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 4.7e-27 124.8 118 50.0
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 2.4e-26 122.5 123 52.0
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 2.4e-26 122.5 124 49.2
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 3.1e-26 122.1 123 52.0
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 4.0e-26 121.7 120 50.0
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 5.2e-26 121.3 122 51.6
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 6.8e-26 120.9 123 50.4
Peaxi162Scf00284g00912 Petunia axillaris HOM05D003492 ORTHO05D005115 8.9e-26 120.6 150 43.3
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 1.2e-25 120.2 123 48.8
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 2.0e-25 119.4 122 49.2
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 3.4e-25 118.6 123 49.6
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 5.8e-25 117.9 124 51.6
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 5.8e-25 117.9 96 58.3
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 7.6e-25 117.5 122 48.4
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 8.4e-24 114.0 123 49.6
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 8.4e-24 114.0 123 49.6
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 1.1e-23 113.6 125 50.4
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 3.2e-23 112.1 124 45.2
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 1.2e-22 110.2 121 46.3
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 2.7e-22 109.0 146 43.8
HPP92_012036 Vanilla planifolia HOM05D003492 ORTHO05D005115 4.6e-22 108.2 129 45.7
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 6.0e-22 107.8 138 44.9
Nitab4.5_0011089g0020 Nicotiana tabacum HOM05D003492 ORTHO05D005115 6.0e-22 107.8 128 46.1
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 7.8e-22 107.5 146 43.2
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 1.0e-21 107.1 122 45.1
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 1.4e-18 96.7 95 52.6
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 9.9e-17 90.5 89 51.7
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 1.7e-16 89.7 108 44.4
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 2.2e-16 89.4 126 43.7
DCAR_011824 Daucus carota HOM05D003492 ORTHO05D005115 8.4e-16 87.4 76 53.9
Lj8A65T40 Lonicera japonica HOM05D003492 ORTHO05D005115 1.1e-15 87.0 75 61.3
Actinidia00955 Actinidia chinensis HOM05D003492 ORTHO05D019467 1.2e-14 83.6 81 55.6
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 1.9e-07 59.7 89 34.8
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 7.1e-07 57.8 125 30.4
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 2.1e-06 56.2 56 39.3
Hund29345 Selenicereus undatus HOM05D003492 ORTHO05D005115 3.5e-06 55.5 44 47.7
SHI03338 Sapria himalayana HOM05D003492 ORTHO05D005115 7.9e-06 54.3 75 34.7


User provided reference genes

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