Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g163960 Pisum sativum HOM05D004807 ORTHO05D005915 7.4e-77 290.4 143 100.0
Psat7g139360 Pisum sativum HOM05D004807 ORTHO05D005915 1.2e-66 256.5 143 91.6
Psat0s2035g0040 Pisum sativum HOM05D004807 ORTHO05D005915 3.0e-62 241.9 132 88.6
Medtr7g107350 Medicago truncatula HOM05D004807 ORTHO05D005915 4.7e-55 218.0 128 81.2
TPR.G32304 Trifolium pratense HOM05D004807 ORTHO05D005915 5.7e-53 211.1 132 76.5
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 4.8e-52 208.0 133 76.7
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 3.1e-51 205.3 132 71.2
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 1.7e-49 199.5 132 69.7
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 1.9e-48 196.1 132 68.9
Glyma.03G206600 Glycine max HOM05D004807 ORTHO05D005915 2.5e-48 195.7 132 70.5
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 4.7e-47 191.4 132 69.7
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 3.7e-44 181.8 132 68.2
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 3.1e-43 178.7 134 64.9
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 5.4e-43 177.9 134 64.2
Ciclev10011020m.g Citrus clementina HOM05D004807 ORTHO05D005915 2.3e-41 172.6 133 59.4
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 2.9e-41 172.2 133 58.6
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 3.8e-41 171.8 132 59.8
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 5.2e-38 161.4 132 56.1
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 1.2e-37 160.2 132 54.5
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 4.4e-37 158.3 132 56.1
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 1.7e-36 156.4 132 53.8
CSS0045552 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 8.3e-36 154.1 138 53.6
Haze_20076 Corylus avellana HOM05D004807 ORTHO05D005915 1.8e-35 152.9 129 55.0
CARHR086510 Cardamine hirsuta HOM05D004807 ORTHO05D005915 2.4e-35 152.5 133 51.9
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 5.4e-35 151.4 140 53.6
AL3G23560 Arabidopsis lyrata HOM05D004807 ORTHO05D005915 9.2e-35 150.6 132 50.0
Aa31LG3G5560 Aethionema arabicum HOM05D004807 ORTHO05D005915 1.2e-34 150.2 133 49.6
BcaC05g29309 Brassica carinata HOM05D004807 ORTHO05D005915 2.0e-34 149.4 134 50.7
BolC5t34266H Brassica oleracea HOM05D004807 ORTHO05D005915 2.0e-34 149.4 134 50.7
Carub.0003s1129 Capsella rubella HOM05D004807 ORTHO05D005915 2.0e-34 149.4 129 51.2
A05p37420 Brassica napus HOM05D004807 ORTHO05D005915 2.7e-34 149.1 134 50.7
BraA05t22540Z Brassica rapa HOM05D004807 ORTHO05D005915 2.7e-34 149.1 134 50.7
BcaB06g25560 Brassica carinata HOM05D004807 ORTHO05D005915 5.9e-34 147.9 129 51.2
C05p55980 Brassica napus HOM05D004807 ORTHO05D005915 5.9e-34 147.9 134 50.0
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 7.8e-34 147.5 130 53.8
Eucgr.K01882 Eucalyptus grandis HOM05D004807 ORTHO05D005915 1.7e-33 146.4 133 52.6
Thhalv10019900m.g Eutrema salsugineum HOM05D004807 ORTHO05D005915 1.7e-33 146.4 133 50.4
THA.LOC104826780 Tarenaya hassleriana HOM05D004807 ORTHO05D005915 1.7e-33 146.4 133 49.6
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 3.8e-33 145.2 131 51.9
BcaB04g18703 Brassica carinata HOM05D004807 ORTHO05D005915 6.6e-33 144.4 129 51.9
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 8.6e-33 144.1 132 50.8
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 8.6e-33 144.1 137 52.6
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 8.6e-33 144.1 136 51.5
Sp3g10180 Schrenkiella parvula HOM05D004807 ORTHO05D005915 8.6e-33 144.1 129 51.9
AT3G11960 Arabidopsis thaliana HOM05D004807 ORTHO05D005915 1.5e-32 143.3 137 48.9
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 1.5e-32 143.3 132 50.8
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 1.5e-32 143.3 132 50.8
vmacro12557 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 2.5e-32 142.5 127 53.5
ECA238G3196 Erigeron canadensis HOM05D004807 ORTHO05D005915 3.3e-32 142.1 137 52.6
Potri.006G197200 Populus trichocarpa HOM05D004807 ORTHO05D005915 3.3e-32 142.1 132 53.0
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 5.6e-32 141.4 130 51.5
Psat3g169960 Pisum sativum HOM05D002132 ORTHO05D009901 5.6e-32 141.4 80 88.8
SHI30024 Sapria himalayana HOM05D004807 ORTHO05D005915 5.6e-32 141.4 132 52.3
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 5.6e-32 141.4 133 51.9
A03p37390 Brassica napus HOM05D004807 ORTHO05D005915 1.2e-31 140.2 130 52.3
BraA03t12900Z Brassica rapa HOM05D004807 ORTHO05D005915 1.2e-31 140.2 130 52.3
Sabra06G0151700 Salix brachista HOM05D004807 ORTHO05D005915 2.1e-31 139.4 132 51.5
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 2.8e-31 139.0 133 50.4
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 1.4e-30 136.7 137 50.4
BcaC01g04068 Brassica carinata HOM05D004807 ORTHO05D005915 1.8e-30 136.3 130 50.8
BolC3t16806H Brassica oleracea HOM05D004807 ORTHO05D005915 1.8e-30 136.3 130 50.8
C03p45390 Brassica napus HOM05D004807 ORTHO05D005915 2.3e-30 136.0 130 50.0
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 2.3e-30 136.0 135 52.6
FAN05G1427 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.3e-30 136.0 135 52.6
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.3e-30 136.0 135 52.6
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.3e-30 136.0 135 52.6
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 5.2e-30 134.8 139 50.4
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 6.8e-30 134.4 133 48.1
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 6.8e-30 134.4 133 48.9
FAN09G2962 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.2e-29 133.7 135 51.9
PGR142G0165 Punica granatum HOM05D004807 ORTHO05D005915 1.2e-29 133.7 127 51.2
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.5e-29 133.3 135 51.9
Oeu046734.3 Olea europaea HOM05D004807 ORTHO05D005915 5.8e-29 131.3 140 50.0
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 2.2e-28 129.4 111 55.0
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 2.2e-28 129.4 136 50.7
DCAR_017047 Daucus carota HOM05D004807 ORTHO05D005915 3.7e-28 128.6 141 46.1
Nitab4.5_0001079g0110 Nicotiana tabacum HOM05D004807 ORTHO05D005915 1.4e-27 126.7 136 44.9
Nitab4.5_0005684g0020 Nicotiana tabacum HOM05D004807 ORTHO05D005915 1.4e-27 126.7 136 44.9
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 1.4e-27 126.7 135 48.9
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 4.1e-27 125.2 130 46.2
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 5.4e-27 124.8 140 46.4
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 7.0e-27 124.4 114 50.9
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 2.0e-26 122.9 147 46.9
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 1.7e-25 119.8 136 43.4
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 5.6e-24 114.8 143 43.4
Actinidia22073 Actinidia chinensis HOM05D004807 ORTHO05D005915 9.5e-24 114.0 133 45.9
MSTRG.19928 Avicennia marina HOM05D004807 ORTHO05D005915 9.5e-24 114.0 143 44.1
EL10Ac3g06848 Beta vulgaris HOM05D004807 ORTHO05D005915 2.1e-23 112.8 140 44.3
CDE05G3662 Ceratophyllum demersum HOM05D004807 ORTHO05D005915 2.1e-23 112.8 136 45.6
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 2.1e-23 112.8 143 42.0
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 6.2e-23 111.3 143 42.7
AUR62032732 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.1e-22 110.5 140 43.6
AUR62026870 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.4e-22 110.2 140 42.9
AUR62015288 Chenopodium quinoa HOM05D004807 ORTHO05D005915 2.3e-22 109.4 140 42.9
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 3.1e-22 109.0 132 39.4
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 8.9e-22 107.5 129 45.7
Hund19221 Selenicereus undatus HOM05D004807 ORTHO05D005915 1.2e-21 107.1 135 44.4
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 1.5e-21 106.7 132 38.6
Ah.04g153050 Amaranthus hybridus HOM05D004807 ORTHO05D005915 3.4e-21 105.5 144 41.0
unitig_0.g511 Utricularia gibba HOM05D004807 ORTHO05D005915 4.9e-20 101.7 139 42.4
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 6.4e-20 101.3 135 43.0
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 1.1e-19 100.5 135 43.0
CsaV3_7G005530 Cucumis sativus L. HOM05D004807 ORTHO05D005915 1.0e-17 94.0 92 50.0
FAN14G5853 Fragaria x ananassa HOM05D004807 ORTHO05D005915 3.0e-17 92.4 129 43.4
Os07g0203700 Oryza sativa ssp. japonica HOM05D004807 ORTHO05D005915 2.3e-14 82.8 120 40.0
Zm00001eb302880 Zea mays HOM05D004807 ORTHO05D005915 5.2e-14 81.6 120 36.7
Cpa.g.sc85.17 Carica papaya HOM05D004807 ORTHO05D005915 4.4e-13 78.6 70 50.0
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 1.1e-11 73.9 131 36.6
MELO3C009593.2 Cucumis melo HOM05D004807 ORTHO05D005915 1.7e-09 66.6 65 49.2


User provided reference genes

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