Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g148640 Pisum sativum HOM05D002163 ORTHO05D002944 2.3e-307 1058.1 557 100.0
Psat4g030600 Pisum sativum HOM05D002163 ORTHO05D002386 1.8e-65 254.6 166 83.7
Psat3g106000 Pisum sativum HOM05D000936 ORTHO05D005107 9.1e-46 189.1 112 87.5
Psat4g064240 Pisum sativum HOM05D004114 ORTHO05D004667 5.5e-43 179.9 269 45.7
Ca_21577_v3 Cicer arietinum L. HOM05D002163 ORTHO05D002386 5.1e-41 173.3 145 68.3
Psat3g062040 Pisum sativum HOM05D000127 ORTHO05D001869 1.5e-40 171.8 269 45.0
Medtr4g117570 Medicago truncatula HOM05D002163 ORTHO05D002386 5.7e-40 169.9 174 59.2
Lj4g0028246 Lotus japonicus HOM05D002163 ORTHO05D002386 7.9e-34 149.4 166 59.0
TPR.G20137 Trifolium pratense HOM05D002163 ORTHO05D002386 4.1e-30 137.1 167 54.5
Psat7g166160 Pisum sativum HOM05D004563 ORTHO05D002944 6.5e-28 129.8 110 69.1
Glyma.17G019100 Glycine max HOM05D002163 ORTHO05D002386 8.5e-28 129.4 138 57.2
Psat0s439g0040 Pisum sativum HOM05D001046 ORTHO05D005883 1.9e-27 128.3 73 87.7
Glyma.07G255200 Glycine max HOM05D002163 ORTHO05D002386 1.6e-26 125.2 186 45.2
arahy.Tifrunner.gnm1.ann1.V0GQ55 Arachis hypogaea HOM05D002163 ORTHO05D002386 4.4e-24 117.1 135 52.6
arahy.Tifrunner.gnm1.ann1.6H6MU0 Arachis hypogaea HOM05D002163 ORTHO05D002386 9.7e-24 115.9 148 50.0
Psat7g129560 Pisum sativum HOM05D002984 ORTHO05D003561 9.7e-24 115.9 68 83.8
VMungo1215G0347 Vigna mungo HOM05D002163 ORTHO05D002386 3.7e-23 114.0 190 45.3
Psat0s2371g0040 Pisum sativum HOM05D000434 ORTHO05D006824 9.1e-22 109.4 73 80.8
Glyma.15G102100 Glycine max HOM05D002163 ORTHO05D002386 7.7e-21 106.3 166 43.4
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 1.0e-20 105.9 67 82.1
Psat5g209640 Pisum sativum HOM05D000434 ORTHO05D007220 3.2e-19 100.9 270 31.9
Ca_00609_v3 Cicer arietinum L. HOM05D002163 ORTHO05D002386 4.2e-19 100.5 146 47.9
Phvul.003G096200 Phaseolus vulgaris HOM05D002163 ORTHO05D002386 5.5e-19 100.1 136 50.0
TPR.G28917 Trifolium pratense HOM05D002163 ORTHO05D002386 7.2e-19 99.8 129 49.6
Glyma.13G210700 Glycine max HOM05D002163 ORTHO05D002386 1.2e-18 99.0 150 42.0
Lalb_Chr20g0118331 Lupinus albus HOM05D002163 ORTHO05D002386 1.2e-18 99.0 133 48.9
Psat3g036640 Pisum sativum HOM05D002451 ORTHO05D005601 4.7e-18 97.1 61 80.3
Psat4g171400 Pisum sativum HOM05D002451 ORTHO05D005601 4.7e-18 97.1 61 80.3
Psat0s171g0040 Pisum sativum HOM05D000434 ORTHO05D007220 1.2e-16 92.4 62 75.8
Medtr1g090340 Medicago truncatula HOM05D003044 ORTHO05D001869 1.5e-16 92.0 59 78.0
TPR.G13387 Trifolium pratense HOM05D003044 ORTHO05D001869 7.5e-16 89.7 60 76.7
FvH4_4g14200 Fragaria vesca HOM05D002163 ORTHO05D002386 3.7e-15 87.4 114 51.8
Phvul.006G155700 Phaseolus vulgaris HOM05D002163 ORTHO05D002386 3.7e-15 87.4 114 49.1
FAN12G2278 Fragaria x ananassa HOM05D002163 ORTHO05D002386 6.3e-15 86.7 112 49.1
FAN22G0102 Fragaria x ananassa HOM05D002163 ORTHO05D002386 8.3e-15 86.3 145 44.1
MD13G1180700 Malus domestica HOM05D002163 ORTHO05D002386 1.8e-14 85.1 187 35.8
Lalb_Chr07g0177421 Lupinus albus HOM05D002163 ORTHO05D002386 2.4e-14 84.7 96 54.2
Psat1g184880 Pisum sativum HOM05D002163 ORTHO05D002386 1.2e-13 82.4 84 56.0
Haze_00985 Corylus avellana HOM05D002163 ORTHO05D002386 1.6e-13 82.0 114 44.7
Ca_10422_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 2.7e-13 81.3 70 62.9
Glyma.20G195200 Glycine max HOM05D003044 ORTHO05D001869 4.5e-13 80.5 64 68.8
CiPaw.02G090500 Carya illinoinensis HOM05D002163 ORTHO05D002386 1.0e-12 79.3 123 43.1
Potri.010G029200 Populus trichocarpa HOM05D002163 ORTHO05D002386 1.0e-12 79.3 189 34.4
Glyma.10G194700 Glycine max HOM05D003044 ORTHO05D001869 1.3e-12 79.0 58 70.7
Cfa015556 Carpinus fangiana HOM05D002163 ORTHO05D002386 2.3e-12 78.2 85 51.8
RcHm_v2.0_Chr4g0419001 Rosa chinensis HOM05D002163 ORTHO05D002386 2.3e-12 78.2 146 42.5
Gohir.D10G150800 Gossypium hirsutum HOM05D002163 ORTHO05D002386 2.9e-12 77.8 148 35.8
QL06p005887 Quercus lobata HOM05D002163 ORTHO05D002386 6.5e-12 76.6 83 51.8
AT3G23540 Arabidopsis thaliana HOM05D002163 ORTHO05D002386 8.6e-12 76.3 146 37.7
Cpa.g.sc16.49 Carica papaya HOM05D002163 ORTHO05D002386 8.6e-12 76.3 85 52.9
CiPaw.01G158100 Carya illinoinensis HOM05D002163 ORTHO05D002386 8.6e-12 76.3 110 46.4
Ciclev10004606m.g Citrus clementina HOM05D002163 ORTHO05D002386 8.6e-12 76.3 122 43.4
Duzib151G1139 Durio zibethinus HOM05D002163 ORTHO05D002386 8.6e-12 76.3 91 50.5
Thecc.04G219300 Theobroma cacao HOM05D002163 ORTHO05D002386 8.6e-12 76.3 92 47.8
Ca_10372_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.1e-11 75.9 73 60.3
Gorai.011G168000 Gossypium raimondii HOM05D002163 ORTHO05D002386 1.1e-11 75.9 148 35.8
Manes.03G186500 Manihot esculenta HOM05D002163 ORTHO05D002386 1.1e-11 75.9 114 47.4
Psat7g178440 Pisum sativum HOM05D004890 ORTHO05D005869 4.2e-11 73.9 41 90.2
Potri.008G200400 Populus trichocarpa HOM05D002163 ORTHO05D002386 4.2e-11 73.9 193 33.7
TAR362G0597 Trochodendron aralioides HOM05D002163 ORTHO05D002386 4.2e-11 73.9 73 57.5
AL3G38200 Arabidopsis lyrata HOM05D002163 ORTHO05D002386 5.5e-11 73.6 148 39.9
VMungo0720G0604 Vigna mungo HOM05D003044 ORTHO05D001869 5.5e-11 73.6 64 64.1
Aqoxy2G03228 Aquilegia oxysepala HOM05D002163 ORTHO05D002386 7.2e-11 73.2 165 33.3
MD16G1181400 Malus domestica HOM05D002163 ORTHO05D002386 1.6e-10 72.0 86 51.2
Prupe.1G148800 Prunus persica HOM05D002163 ORTHO05D002386 1.6e-10 72.0 174 35.1
Carub.0003s2374 Capsella rubella HOM05D002163 ORTHO05D002386 2.1e-10 71.6 66 57.6
Lj6g0027793 Lotus japonicus HOM05D002163 ORTHO05D002386 2.8e-10 71.2 100 44.0
Manes.15G021600 Manihot esculenta HOM05D002163 ORTHO05D002386 2.8e-10 71.2 130 39.2
TWI73G1105 Tripterygium wilfordii HOM05D002163 ORTHO05D002386 4.7e-10 70.5 86 50.0
Lj5g0009221 Lotus japonicus HOM05D003044 ORTHO05D001869 6.1e-10 70.1 69 60.9
TWI53G0188 Tripterygium wilfordii HOM05D002163 ORTHO05D002386 6.1e-10 70.1 67 58.2
CARHR099440 Cardamine hirsuta HOM05D002163 ORTHO05D002386 8.0e-10 69.7 51 64.7
Nn4g26155 Nelumbo nucifera HOM05D002163 ORTHO05D002386 8.0e-10 69.7 107 43.9
Sabra10G0011900 Salix brachista HOM05D002163 ORTHO05D002386 8.0e-10 69.7 112 45.5
Medtr2g021260 Medicago truncatula HOM05D002163 ORTHO05D002386 1.0e-09 69.3 112 43.8
Psat5g059840 Pisum sativum HOM05D000434 ORTHO05D007220 1.0e-09 69.3 49 77.6
AT4G14290 Arabidopsis thaliana HOM05D002163 ORTHO05D002386 2.3e-09 68.2 72 52.8
THA.LOC104808656 Tarenaya hassleriana HOM05D002163 ORTHO05D002386 2.3e-09 68.2 128 43.8
arahy.Tifrunner.gnm1.ann1.LT40GI Arachis hypogaea HOM05D002163 ORTHO05D002386 3.0e-09 67.8 110 44.5
Ca_18997_v3 Cicer arietinum L. HOM05D004890 ORTHO05D005869 3.0e-09 67.8 40 82.5
Lalb_Chr01g0010681 Lupinus albus HOM05D003044 ORTHO05D001869 3.0e-09 67.8 66 57.6
Carub.0007s2802 Capsella rubella HOM05D002163 ORTHO05D002386 4.0e-09 67.4 70 52.9
GSVIVG01017869001 Vitis vinifera HOM05D002163 ORTHO05D002386 4.0e-09 67.4 72 54.2
CSS0016196 Camellia sinensis var. sinensis HOM05D002163 ORTHO05D002386 5.2e-09 67.0 172 32.6
Sed0008129 Sechium edule HOM05D002163 ORTHO05D002386 5.2e-09 67.0 120 39.2
ClCG06G005700 Citrullus lanatus HOM05D002163 ORTHO05D002386 6.8e-09 66.6 93 45.2
CsaV3_6G005450 Cucumis sativus L. HOM05D002163 ORTHO05D002386 6.8e-09 66.6 127 38.6
Medtr4g075520 Medicago truncatula HOM05D004890 ORTHO05D005869 6.8e-09 66.6 63 63.5
Aa31LG9G3080 Aethionema arabicum HOM05D002163 ORTHO05D002386 8.8e-09 66.2 69 53.6
Thhalv10020399m.g Eutrema salsugineum HOM05D002163 ORTHO05D002386 1.2e-08 65.9 50 70.0
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 1.2e-08 65.9 73 57.5
arahy.Tifrunner.gnm1.ann1.7I5575 Arachis hypogaea HOM05D002163 ORTHO05D002386 1.5e-08 65.5 140 36.4
HanXRQChr10g0310201 Helianthus annuus HOM05D002163 ORTHO05D002386 1.5e-08 65.5 89 46.1
AL7G42000 Arabidopsis lyrata HOM05D002163 ORTHO05D002386 2.0e-08 65.1 70 51.4
BcaB02g08621 Brassica carinata HOM05D002163 ORTHO05D002386 2.0e-08 65.1 103 41.7
C03p76890 Brassica napus HOM05D002163 ORTHO05D002386 2.0e-08 65.1 66 57.6
Thhalv10024836m.g Eutrema salsugineum HOM05D002163 ORTHO05D002386 2.0e-08 65.1 86 45.3
Glyma.04G137300 Glycine max HOM05D002163 ORTHO05D002386 2.0e-08 65.1 38 81.6
Lalb_Chr02g0150891 Lupinus albus HOM05D003044 ORTHO05D001869 2.0e-08 65.1 57 61.4
PGR004G1581 Punica granatum HOM05D002163 ORTHO05D002386 2.0e-08 65.1 175 32.0
MSTRG.21828 Avicennia marina HOM05D002163 ORTHO05D002386 2.6e-08 64.7 198 27.8
BolC3t19944H Brassica oleracea HOM05D002163 ORTHO05D002386 2.6e-08 64.7 66 57.6
Dinv44468 Davidia involucrata HOM05D002163 ORTHO05D002386 2.6e-08 64.7 170 34.1
A07p08850 Brassica napus HOM05D002163 ORTHO05D002386 3.4e-08 64.3 60 61.7
BraA07t28676Z Brassica rapa HOM05D002163 ORTHO05D002386 3.4e-08 64.3 60 61.7
CANSAT78G1916 Cannabis sativa HOM05D002163 ORTHO05D002386 4.4e-08 63.9 132 35.6
MELO3C021392.2 Cucumis melo HOM05D002163 ORTHO05D002386 4.4e-08 63.9 147 34.7
CARHR220470 Cardamine hirsuta HOM05D002163 ORTHO05D002386 5.7e-08 63.5 126 38.9
Phvul.007G233800 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 5.7e-08 63.5 67 55.2
BraA04t16471Z Brassica rapa HOM05D002163 ORTHO05D002386 7.5e-08 63.2 177 32.8
Cc03_g02950 Coffea canephora HOM05D002163 ORTHO05D002386 7.5e-08 63.2 114 34.2
Oeu023654.1 Olea europaea HOM05D002163 ORTHO05D002386 7.5e-08 63.2 65 50.8
Oeu037670.3 Olea europaea HOM05D002163 ORTHO05D002386 7.5e-08 63.2 92 41.3
Solyc01g080270.3 Solanum lycopersicum HOM05D002163 ORTHO05D002386 7.5e-08 63.2 49 59.2
Sopen01g032060 Solanum pennellii HOM05D002163 ORTHO05D002386 7.5e-08 63.2 49 59.2
Glyma.10G120200 Glycine max HOM05D003044 ORTHO05D001869 9.8e-08 62.8 60 60.0
Lalb_Chr21g0312741 Lupinus albus HOM05D003044 ORTHO05D001869 9.8e-08 62.8 68 57.4
PGR031G2583 Punica granatum HOM05D002163 ORTHO05D002386 9.8e-08 62.8 99 40.4
Sp3g21200 Schrenkiella parvula HOM05D002163 ORTHO05D002386 9.8e-08 62.8 125 40.8
Peaxi162Scf00095g00087 Petunia axillaris HOM05D002163 ORTHO05D002386 1.3e-07 62.4 118 37.3
BcaC02g09336 Brassica carinata HOM05D002163 ORTHO05D002386 1.7e-07 62.0 175 32.6
A08p24320 Brassica napus HOM05D002163 ORTHO05D002386 1.7e-07 62.0 69 53.6
BraA08t34387Z Brassica rapa HOM05D002163 ORTHO05D002386 1.7e-07 62.0 69 53.6
AUR62022512 Chenopodium quinoa HOM05D002163 ORTHO05D002386 1.7e-07 62.0 126 34.1
Eucgr.B01162 Eucalyptus grandis HOM05D002163 ORTHO05D002386 1.7e-07 62.0 87 48.3
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 1.7e-07 62.0 61 59.0
A04p07830 Brassica napus HOM05D002163 ORTHO05D002386 2.2e-07 61.6 177 32.8
C04p41460 Brassica napus HOM05D002163 ORTHO05D002386 2.2e-07 61.6 175 32.6
Nn1g02133 Nelumbo nucifera HOM05D002163 ORTHO05D002386 2.2e-07 61.6 72 47.2
Nitab4.5_0006569g0040 Nicotiana tabacum HOM05D002163 ORTHO05D002386 2.2e-07 61.6 113 37.2
BolC4t25728H Brassica oleracea HOM05D002163 ORTHO05D002386 2.8e-07 61.2 175 32.6
Duzib212G0564 Durio zibethinus HOM05D002163 ORTHO05D002386 3.7e-07 60.8 92 43.5
Glyma.20G070600 Glycine max HOM05D003044 ORTHO05D001869 3.7e-07 60.8 51 62.7
BcaB04g20445 Brassica carinata HOM05D002163 ORTHO05D002386 4.9e-07 60.5 58 58.6
Lj6C664T14 Lonicera japonica HOM05D002163 ORTHO05D002386 4.9e-07 60.5 73 47.9
AUR62038384 Chenopodium quinoa HOM05D002163 ORTHO05D002386 6.3e-07 60.1 126 34.1
Sp7g12300 Schrenkiella parvula HOM05D002163 ORTHO05D002386 6.3e-07 60.1 82 47.6
Actinidia23464 Actinidia chinensis HOM05D002163 ORTHO05D002386 8.3e-07 59.7 117 33.3
Ca_18140_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 8.3e-07 59.7 69 59.4
Migut.N00141 Erythranthe guttata HOM05D002163 ORTHO05D002386 8.3e-07 59.7 56 51.8
Sc19g0004670 Simmondsia chinensis HOM05D002163 ORTHO05D002386 8.3e-07 59.7 164 32.3
CSS0044955 Camellia sinensis var. sinensis HOM05D002163 ORTHO05D002386 1.1e-06 59.3 130 34.6
VMungo0540G1913 Vigna mungo HOM05D002163 ORTHO05D002386 1.1e-06 59.3 143 38.5
Aa31LG8G9990 Aethionema arabicum HOM05D002163 ORTHO05D002386 1.4e-06 58.9 90 41.1
Psat6g049400 Pisum sativum HOM05D003044 ORTHO05D001869 1.4e-06 58.9 76 52.6
BcaC06g35538 Brassica carinata HOM05D002163 ORTHO05D002386 1.8e-06 58.5 174 31.0
C07p13710 Brassica napus HOM05D002163 ORTHO05D002386 1.8e-06 58.5 174 31.0
BolC7t41866H Brassica oleracea HOM05D002163 ORTHO05D002386 1.8e-06 58.5 174 31.0
CiPaw.14G036200 Carya illinoinensis HOM05D003044 ORTHO05D001869 1.8e-06 58.5 73 46.6
Hma1.2p1_0511F.1_g169150 Hydrangea macrophylla HOM05D002163 ORTHO05D002386 1.8e-06 58.5 113 37.2
Lsat_1_v5_gn_5_78420 Lactuca sativa HOM05D002163 ORTHO05D002386 1.8e-06 58.5 47 61.7
CAN.G522.7 Capsicum annuum HOM05D002163 ORTHO05D002386 2.4e-06 58.2 127 37.0
Cfa010501 Carpinus fangiana HOM05D003044 ORTHO05D001869 2.4e-06 58.2 57 54.4
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 2.4e-06 58.2 57 54.4
DCAR_000334 Daucus carota HOM05D002163 ORTHO05D002386 2.4e-06 58.2 62 43.5
TPR.G17158 Trifolium pratense HOM05D004890 ORTHO05D005869 2.4e-06 58.2 41 75.6
EL10As19g24188 Beta vulgaris HOM05D002163 ORTHO05D002386 3.1e-06 57.8 127 34.6
Duzib128G0650 Durio zibethinus HOM05D003044 ORTHO05D001869 3.1e-06 57.8 56 55.4
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 3.1e-06 57.8 67 50.7
PSO407G0235 Papaver somniferum HOM05D002163 ORTHO05D002386 4.1e-06 57.4 53 49.1
MSTRG.24761 Avicennia marina HOM05D002163 ORTHO05D002386 9.2e-06 56.2 49 53.1
A01p31530 Brassica napus HOM05D002163 ORTHO05D002386 9.2e-06 56.2 58 55.2
C01p40230 Brassica napus HOM05D002163 ORTHO05D002386 9.2e-06 56.2 58 55.2
BolC1t03984H Brassica oleracea HOM05D002163 ORTHO05D002386 9.2e-06 56.2 58 55.2
BraA01t03283Z Brassica rapa HOM05D002163 ORTHO05D002386 9.2e-06 56.2 58 55.2
TPR.G30391 Trifolium pratense HOM05D004563 ORTHO05D002944 9.2e-06 56.2 84 51.2


User provided reference genes

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