Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g079600 Pisum sativum HOM05D001934 ORTHO05D003002 1.4e-57 226.1 113 100.0
Psat7g123280 Pisum sativum HOM05D002801 ORTHO05D003002 3.0e-33 145.2 284 37.0
Psat4g125720 Pisum sativum HOM05D002801 ORTHO05D003002 1.0e-20 103.6 60 81.7
Psat4g113080 Pisum sativum HOM05D002801 ORTHO05D003002 6.6e-20 100.9 59 79.7
Ca_22518_v3 Cicer arietinum L. HOM05D002801 ORTHO05D003002 9.2e-14 80.5 53 69.8
Psat7g191720 Pisum sativum HOM05D001934 ORTHO05D002139 1.6e-13 79.7 39 94.9
TPR.G24800 Trifolium pratense HOM05D002801 ORTHO05D003002 1.2e-10 70.1 53 64.2
Medtr8g069965 Medicago truncatula HOM05D002801 ORTHO05D003002 3.6e-10 68.6 52 63.5
Medtr4g057345 Medicago truncatula HOM05D001934 ORTHO05D002139 6.2e-10 67.8 39 76.9
Lj3g0025418 Lotus japonicus HOM05D001934 ORTHO05D002139 1.8e-09 66.2 39 76.9
Lj4g0021696 Lotus japonicus HOM05D002801 ORTHO05D003002 2.3e-09 65.9 53 56.6
TPR.G36794 Trifolium pratense HOM05D001934 ORTHO05D002139 2.3e-09 65.9 56 62.5
arahy.Tifrunner.gnm1.ann1.Z70S0B Arachis hypogaea HOM05D001934 ORTHO05D002139 2.0e-08 62.8 37 75.7
Medtr4g057340 Medicago truncatula HOM05D001934 ORTHO05D002139 2.0e-08 62.8 39 69.2
arahy.Tifrunner.gnm1.ann1.489L6Z Arachis hypogaea HOM05D001934 ORTHO05D002139 2.6e-08 62.4 42 69.0
arahy.Tifrunner.gnm1.ann1.CF9NWX Arachis hypogaea HOM05D001934 ORTHO05D002139 2.6e-08 62.4 42 69.0
arahy.Tifrunner.gnm1.ann1.E6T32I Arachis hypogaea HOM05D001934 ORTHO05D002139 2.6e-08 62.4 37 75.7
Ca_19318_v3 Cicer arietinum L. HOM05D001934 ORTHO05D002139 4.4e-08 61.6 39 69.2
Phvul.011G085900 Phaseolus vulgaris HOM05D001934 ORTHO05D002139 4.4e-08 61.6 49 61.2
VMungo1127G0172 Vigna mungo HOM05D001934 ORTHO05D002139 9.9e-08 60.5 46 60.9
Lalb_Chr19g0136941 Lupinus albus HOM05D001934 ORTHO05D002139 1.3e-07 60.1 57 57.9
Glyma.02G048100 Glycine max HOM05D002801 ORTHO05D003002 2.2e-07 59.3 52 55.8
Glyma.12G080900 Glycine max HOM05D001934 ORTHO05D002139 2.2e-07 59.3 46 58.7
Phvul.005G021200 Phaseolus vulgaris HOM05D001934 ORTHO05D002139 2.2e-07 59.3 39 64.1
BcaB07g34055 Brassica carinata HOM05D001934 ORTHO05D002139 6.4e-07 57.8 57 52.6
BraA09t41940Z Brassica rapa HOM05D001934 ORTHO05D002139 6.4e-07 57.8 39 61.5
Gohir.D03G139300 Gossypium hirsutum HOM05D001934 ORTHO05D002139 6.4e-07 57.8 45 62.2
Gorai.003G146000 Gossypium raimondii HOM05D001934 ORTHO05D002139 6.4e-07 57.8 45 62.2
Sp1g06770 Schrenkiella parvula HOM05D001934 ORTHO05D002139 6.4e-07 57.8 39 61.5
A06p05190 Brassica napus HOM05D001934 ORTHO05D002139 8.3e-07 57.4 39 61.5
C05p06240 Brassica napus HOM05D001934 ORTHO05D002139 8.3e-07 57.4 39 61.5
BraA06t23726Z Brassica rapa HOM05D001934 ORTHO05D002139 8.3e-07 57.4 39 61.5
AL1G56130 Arabidopsis lyrata HOM05D001934 ORTHO05D002139 1.1e-06 57.0 39 61.5
BcaC05g24731 Brassica carinata HOM05D001934 ORTHO05D002139 1.1e-06 57.0 39 61.5
BolC5t29379H Brassica oleracea HOM05D001934 ORTHO05D002139 1.1e-06 57.0 39 61.5
Gohir.A03G029300 Gossypium hirsutum HOM05D001934 ORTHO05D002139 1.1e-06 57.0 39 64.1
Atru.chr3.3525 Acer truncatum HOM05D001934 ORTHO05D002139 1.4e-06 56.6 58 55.2
AL1G18510 Arabidopsis lyrata HOM05D001934 ORTHO05D002139 1.4e-06 56.6 39 61.5
BcaC07g41965 Brassica carinata HOM05D001934 ORTHO05D002139 1.4e-06 56.6 57 49.1
A09p66010 Brassica napus HOM05D001934 ORTHO05D002139 1.4e-06 56.6 57 49.1
CARHR007940 Cardamine hirsuta HOM05D001934 ORTHO05D002139 1.4e-06 56.6 58 50.0
Thecc.09G350700 Theobroma cacao HOM05D001934 ORTHO05D002139 1.4e-06 56.6 39 64.1
Ca_04368_v3 Cicer arietinum L. HOM05D001934 ORTHO05D002139 1.9e-06 56.2 37 70.3
Thhalv10006843m.g Eutrema salsugineum HOM05D001934 ORTHO05D002139 2.4e-06 55.8 39 59.0
C08p50170 Brassica napus HOM05D001934 ORTHO05D002139 3.2e-06 55.5 57 49.1
BolC8t52546H Brassica oleracea HOM05D001934 ORTHO05D002139 3.2e-06 55.5 57 49.1
Carub.0001s0748 Capsella rubella HOM05D001934 ORTHO05D002139 4.1e-06 55.1 39 59.0
COL.COLO4_11104 Corchorus olitorius HOM05D001934 ORTHO05D002139 5.4e-06 54.7 39 61.5
AT1G08130 Arabidopsis thaliana HOM05D001934 ORTHO05D002139 7.1e-06 54.3 39 56.4
Duzib150G0588 Durio zibethinus HOM05D001934 ORTHO05D002139 7.1e-06 54.3 61 49.2
Glyma.16G128300 Glycine max HOM05D002801 ORTHO05D003002 7.1e-06 54.3 52 51.9


User provided reference genes

Program Settings