Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.3e-246 855.9 426 100.0
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 4.9e-225 784.3 426 90.4
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 4.7e-220 767.7 420 90.0
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 4.9e-217 757.7 426 87.6
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 3.5e-215 751.5 428 86.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.1e-213 746.5 426 85.4
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 7.3e-213 743.8 426 85.0
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 7.5e-210 733.8 423 84.4
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.4e-208 729.6 412 86.7
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 8.1e-196 687.2 427 80.3
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.1e-189 666.8 428 76.6
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.8e-187 659.4 434 75.6
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 6.9e-187 657.5 423 76.6
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 9.0e-187 657.1 427 76.3
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 1.5e-186 656.4 429 76.5
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 4.5e-186 654.8 425 75.8
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 2.9e-185 652.1 426 75.4
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 8.4e-185 650.6 427 75.2
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.1e-184 650.2 418 75.6
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 4.2e-184 648.3 423 75.2
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 5.4e-184 647.9 423 74.7
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.1e-183 646.0 423 74.7
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.7e-183 645.6 427 75.4
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 4.6e-183 644.8 421 74.8
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 6.0e-183 644.4 431 73.3
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.8e-182 642.9 427 74.2
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.3e-182 642.5 421 74.8
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.1e-182 641.3 427 73.8
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 6.7e-182 641.0 427 74.0
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 8.7e-182 640.6 422 74.4
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.5e-181 639.8 426 74.4
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 2.5e-181 639.0 430 73.7
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 5.6e-181 637.9 430 73.7
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 7.4e-181 637.5 427 72.8
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 9.6e-181 637.1 430 73.7
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 6.2e-180 634.4 428 72.9
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 1.2e-178 630.2 421 73.6
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 1.2e-178 630.2 421 73.6
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 3.4e-178 628.6 458 68.1
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 5.8e-178 627.9 421 72.0
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 7.6e-178 627.5 426 71.1
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 3.2e-176 622.1 430 70.2
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.0e-174 617.1 427 71.0
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.0e-174 617.1 424 71.5
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.3e-174 616.7 425 71.3
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 2.3e-174 615.9 421 72.2
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 3.0e-174 615.5 427 71.0
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 5.1e-174 614.8 428 70.1
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 6.7e-174 614.4 428 72.0
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 6.7e-174 614.4 439 70.4
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 8.7e-174 614.0 425 70.8
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.5e-173 612.5 427 70.3
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.8e-172 609.0 432 68.3
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 6.2e-172 607.8 428 71.3
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 8.2e-172 607.4 428 71.3
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.8e-171 606.3 428 70.8
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 2.4e-171 605.9 428 71.5
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 2.4e-171 605.9 422 70.4
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 5.3e-171 604.7 428 69.4
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 6.9e-171 604.4 421 69.1
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 9.0e-171 604.0 422 71.1
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.5e-170 603.2 423 68.3
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 2.6e-170 602.4 419 70.6
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 4.5e-170 601.7 421 69.4
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 4.5e-170 601.7 427 68.9
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.3e-169 600.1 421 69.4
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.7e-169 599.7 418 69.1
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.9e-169 599.0 421 70.5
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 4.9e-169 598.2 422 69.2
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.9e-168 596.3 422 69.4
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 2.5e-168 595.9 424 68.9
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 2.5e-168 595.9 424 68.9
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 4.2e-168 595.1 421 69.6
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 5.5e-168 594.7 422 69.7
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 5.5e-168 594.7 422 69.2
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.1e-168 594.3 422 69.0
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.7e-167 592.4 421 68.6
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 6.0e-167 591.3 421 69.1
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 7.9e-167 590.9 430 68.6
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.0e-166 589.0 445 66.1
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 3.9e-166 588.6 418 69.6
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 5.7e-165 584.7 430 68.1
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.3e-164 583.6 466 63.5
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 4.8e-164 581.6 424 68.9
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.1e-163 580.5 447 65.1
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.8e-163 579.7 426 66.4
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 9.0e-163 577.4 424 68.4
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.5e-162 576.6 424 68.6
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.9e-162 574.7 418 65.6
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 7.6e-162 574.3 424 68.4
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.0e-161 573.9 418 67.9
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.3e-161 573.5 531 58.6
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 8.5e-161 570.9 418 64.8
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.5e-160 569.3 418 67.5
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 5.1e-158 561.6 418 66.5
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 3.1e-155 552.4 427 63.0
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 5.5e-152 541.6 419 65.2
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 2.3e-150 536.2 421 62.7
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 2.6e-149 532.7 423 59.3
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 6.3e-148 528.1 415 61.7
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 2.2e-145 519.6 427 59.5
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 3.2e-144 515.8 334 76.0
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 8.2e-140 501.1 421 57.0
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 5.0e-137 491.9 429 57.3
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.2e-133 480.7 420 59.0
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 5.7e-133 478.4 355 65.6
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 2.8e-132 476.1 422 55.7
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.6e-130 470.3 429 53.1
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.7e-129 466.8 429 57.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 8.0e-127 458.0 290 75.2
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 2.4e-123 446.4 434 56.2
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 8.6e-121 438.0 353 63.7
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 4.7e-119 432.2 425 48.9
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 8.9e-118 427.9 275 76.0
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 5.0e-113 412.1 426 53.1
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 2.1e-111 406.8 269 74.7
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 1.1e-86 324.7 193 81.3
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 1.5e-85 320.9 442 42.1
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 3.9e-73 279.6 234 57.3
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.3e-68 264.6 291 51.2
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 4.0e-62 243.0 183 67.2
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 8.5e-44 182.2 137 68.6
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 2.8e-31 140.6 101 64.4
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.4e-30 138.3 91 69.2
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 7.0e-30 136.0 95 67.4
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 1.8e-25 121.3 97 59.8
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.6e-10 71.6 360 23.9
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 4.0e-09 67.0 101 43.6
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 2.2e-07 61.2 41 65.9


User provided reference genes

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