Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s8568g0080 Pisum sativum HOM05D003353 ORTHO05D003751 2.3e-44 181.8 90 100.0
Psat1g059480 Pisum sativum HOM05D003353 ORTHO05D003751 5.4e-41 170.6 88 95.5
TPR.G2281 Trifolium pratense HOM05D003353 ORTHO05D003751 8.6e-31 136.7 88 80.7
Lj2g0012220 Lotus japonicus HOM05D003353 ORTHO05D003751 4.0e-20 101.3 88 61.4
Phvul.004G017600 Phaseolus vulgaris HOM05D003353 ORTHO05D003751 1.3e-18 96.3 88 58.0
Glyma.19G010200 Glycine max HOM05D003353 ORTHO05D003751 1.7e-18 95.9 88 60.2
Glyma.13G170000 Glycine max HOM05D003353 ORTHO05D003751 2.2e-18 95.5 86 59.3
VMungo0464G0152 Vigna mungo HOM05D003353 ORTHO05D003751 8.4e-18 93.6 88 58.0
Medtr6g007650 Medicago truncatula HOM05D003353 ORTHO05D003751 2.1e-16 89.0 86 58.1
Lalb_Chr06g0176091 Lupinus albus HOM05D003353 ORTHO05D003751 1.3e-15 86.3 90 55.6
Lalb_Chr02g0160051 Lupinus albus HOM05D003353 ORTHO05D003751 6.2e-13 77.4 90 55.6
Lalb_Chr02g0160241 Lupinus albus HOM05D003353 ORTHO05D003751 6.2e-13 77.4 90 55.6
arahy.Tifrunner.gnm1.ann1.50RNEG Arachis hypogaea HOM05D003353 ORTHO05D003751 1.4e-12 76.3 88 46.6
arahy.Tifrunner.gnm1.ann1.S45US4 Arachis hypogaea HOM05D003353 ORTHO05D003751 1.4e-12 76.3 88 46.6
Prupe.3G283100 Prunus persica HOM05D003353 ORTHO05D003751 2.4e-09 65.5 97 42.3
Psat0s1953g0200 Pisum sativum HOM05D003353 ORTHO05D003751 5.4e-09 64.3 88 45.5
CiPaw.03G037100 Carya illinoinensis HOM05D003353 ORTHO05D003751 7.8e-08 60.5 99 45.5
QL02p076799 Quercus lobata HOM05D003353 ORTHO05D003751 7.8e-08 60.5 93 44.1
Cfa007435 Carpinus fangiana HOM05D003353 ORTHO05D003751 1.3e-07 59.7 95 42.1
Haze_14661 Corylus avellana HOM05D003353 ORTHO05D003751 2.3e-07 58.9 95 42.1
MD17G1035500 Malus domestica HOM05D003353 ORTHO05D003751 3.9e-07 58.2 97 41.2
RcHm_v2.0_Chr2g0171081 Rosa chinensis HOM05D003353 ORTHO05D003751 3.9e-07 58.2 97 38.1
CiPaw.04G024200 Carya illinoinensis HOM05D003353 ORTHO05D003751 6.6e-07 57.4 97 40.2
Lalb_Chr21g0319411 Lupinus albus HOM05D003353 ORTHO05D003751 6.6e-07 57.4 76 42.1
Atru.chr6.2192 Acer truncatum HOM05D003353 ORTHO05D003751 1.1e-06 56.6 89 41.6


User provided reference genes

Program Settings