Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s760g0040 Pisum sativum HOM05D003919 ORTHO05D004906 8.5e-75 283.5 135 100.0
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 6.0e-52 207.6 217 53.0
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 1.7e-46 189.5 217 49.8
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 3.5e-44 181.8 217 47.0
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 6.0e-44 181.0 217 46.5
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 1.0e-43 180.3 217 47.0
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 1.0e-43 180.3 216 47.7
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 2.3e-43 179.1 217 46.5
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 3.3e-42 175.3 217 45.6
Psat1g148120 Pisum sativum HOM05D003919 ORTHO05D002405 3.4e-39 165.2 87 87.4
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 5.4e-37 157.9 217 41.5
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 1.2e-36 156.8 217 41.5
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 4.6e-36 154.8 217 41.5
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 7.8e-36 154.1 217 39.6
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.0e-35 153.7 217 39.6
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 3.9e-35 151.8 217 39.6
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 3.9e-35 151.8 217 39.6
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 8.6e-35 150.6 215 40.5
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 1.1e-34 150.2 217 39.6
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 1.9e-34 149.4 217 41.5
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 4.3e-34 148.3 216 39.8
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 5.6e-34 147.9 215 40.5
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 7.3e-34 147.5 215 40.5
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 1.2e-33 146.7 214 41.1
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.4e-32 143.3 215 39.1
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 1.4e-32 143.3 214 39.3
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 1.4e-32 143.3 215 39.5
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.8e-32 142.9 215 39.1
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 1.2e-31 140.2 217 37.3
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 1.2e-31 140.2 216 38.4
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 1.2e-31 140.2 212 39.6
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 1.5e-31 139.8 215 38.1
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 2.6e-31 139.0 215 37.7
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 4.4e-31 138.3 216 38.0
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 9.9e-31 137.1 214 38.3
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 1.3e-30 136.7 217 38.2
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 2.2e-30 136.0 218 37.2
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 3.8e-30 135.2 216 37.0
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 3.8e-30 135.2 215 38.6
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 4.9e-30 134.8 216 36.6
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 8.4e-30 134.0 217 36.4
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 1.4e-29 133.3 218 39.0
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 1.4e-29 133.3 216 38.0
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 1.4e-29 133.3 216 35.6
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 3.2e-29 132.1 210 38.1
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 4.2e-29 131.7 216 37.0
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 4.2e-29 131.7 216 37.0
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 5.4e-29 131.3 216 38.0
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 5.4e-29 131.3 214 36.4
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 1.2e-28 130.2 214 37.4
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 2.1e-28 129.4 217 36.9
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 3.5e-28 128.6 214 36.0
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 3.5e-28 128.6 216 36.1
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 3.5e-28 128.6 214 36.0
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 4.6e-28 128.3 214 35.5
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 6.0e-28 127.9 216 35.2
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 7.8e-28 127.5 214 36.0
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 7.8e-28 127.5 214 35.5
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 7.8e-28 127.5 214 36.9
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 1.3e-27 126.7 217 36.9
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 1.7e-27 126.3 214 36.0
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 2.3e-27 125.9 214 35.0
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 2.3e-27 125.9 217 35.0
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 6.6e-27 124.4 91 65.9
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 8.7e-27 124.0 214 35.0
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 8.7e-27 124.0 214 35.0
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 8.7e-27 124.0 214 35.0
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 8.7e-27 124.0 214 35.0
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 1.9e-26 122.9 217 34.1
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 9.6e-26 120.6 217 33.6
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 2.1e-25 119.4 216 34.7
CDE08G0032 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 3.6e-25 118.6 214 32.7
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 6.2e-25 117.9 213 35.7
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 8.1e-25 117.5 217 34.1
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 8.1e-25 117.5 217 34.1
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 1.1e-24 117.1 214 33.2
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 1.1e-24 117.1 218 33.0
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 6.9e-24 114.4 215 34.9
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 9.0e-24 114.0 229 31.9
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 5.8e-23 111.3 210 33.3
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 6.4e-22 107.8 209 32.5
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 1.1e-21 107.1 216 32.9
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 3.2e-21 105.5 211 32.7
HPP92_012877 Vanilla planifolia HOM05D003919 ORTHO05D004906 5.4e-21 104.8 88 55.7
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 1.0e-19 100.5 91 50.5
Psat7g249360 Pisum sativum HOM05D001947 ORTHO05D021361 5.3e-16 88.2 41 97.6
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 2.4e-13 79.3 100 45.0
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 3.2e-13 79.0 100 42.0
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 4.6e-12 75.1 38 84.2
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 1.5e-10 70.1 100 40.0
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 1.9e-10 69.7 100 42.0


User provided reference genes

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