Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 1.1e-128 463.4 236 100.0
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 7.6e-119 430.6 236 93.6
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 6.9e-112 407.5 236 87.3
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 1.2e-111 406.8 236 87.7
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 4.4e-111 404.8 236 85.6
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 4.8e-105 384.8 210 92.4
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 1.4e-104 383.3 236 81.8
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 4.3e-98 361.7 235 77.4
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 6.2e-97 357.8 236 75.0
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 1.1e-96 357.1 213 84.0
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 2.4e-96 355.9 236 75.4
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 6.9e-96 354.4 233 74.7
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 1.5e-95 353.2 231 74.9
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 1.5e-95 353.2 236 73.7
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 2.0e-95 352.8 233 75.1
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 4.5e-95 351.7 233 73.4
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 5.8e-95 351.3 232 73.3
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 1.3e-94 350.1 234 73.1
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 2.9e-94 349.0 254 73.2
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 3.8e-94 348.6 235 72.8
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 4.9e-94 348.2 233 73.0
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 6.5e-94 347.8 234 73.9
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 6.5e-94 347.8 232 72.0
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.4e-93 346.7 232 72.8
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 4.2e-93 345.1 236 72.0
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 7.1e-93 344.4 236 72.0
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 9.3e-93 344.0 233 72.1
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 9.3e-93 344.0 233 70.8
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 1.2e-92 343.6 234 71.8
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.6e-92 343.2 226 74.8
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 2.7e-92 342.4 226 74.3
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 4.6e-92 341.7 234 70.9
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 6.0e-92 341.3 234 70.5
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 1.0e-91 340.5 236 70.3
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 1.3e-91 340.1 234 69.7
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 2.3e-91 339.3 234 70.5
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 2.3e-91 339.3 234 71.4
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 2.3e-91 339.3 236 72.0
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 2.3e-91 339.3 236 72.0
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 3.9e-91 338.6 235 68.9
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 3.9e-91 338.6 235 68.9
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 6.7e-91 337.8 247 69.2
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 6.7e-91 337.8 236 70.8
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 8.7e-91 337.4 382 52.4
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 1.1e-90 337.0 234 69.2
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 2.5e-90 335.9 234 68.8
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 2.5e-90 335.9 235 68.5
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 2.5e-90 335.9 235 68.5
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 2.5e-90 335.9 235 68.5
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 4.3e-90 335.1 233 69.1
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 4.3e-90 335.1 235 71.9
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 7.4e-90 334.3 235 69.4
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 1.3e-89 333.6 235 68.9
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 1.6e-89 333.2 233 70.0
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 1.6e-89 333.2 233 70.8
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 1.6e-89 333.2 233 70.4
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 1.6e-89 333.2 233 72.1
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 2.8e-89 332.4 233 70.4
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 8.2e-89 330.9 233 70.0
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.1e-88 330.5 255 65.9
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 1.8e-88 329.7 233 70.4
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 2.4e-88 329.3 234 69.7
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 4.1e-88 328.6 233 69.1
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 5.3e-88 328.2 232 66.4
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 5.3e-88 328.2 232 71.1
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 5.3e-88 328.2 232 69.0
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 6.9e-88 327.8 227 70.9
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 1.2e-87 327.0 236 69.1
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 1.2e-87 327.0 233 67.4
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 1.5e-87 326.6 233 69.1
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 2.6e-87 325.9 271 62.0
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 2.6e-87 325.9 233 68.7
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 4.5e-87 325.1 232 69.8
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 7.6e-87 324.3 403 49.1
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 5.0e-86 321.6 268 61.6
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 8.4e-86 320.9 226 69.9
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 1.4e-85 320.1 232 68.1
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 9.3e-85 317.4 228 66.7
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 1.2e-84 317.0 232 66.8
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 6.1e-84 314.7 228 68.0
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 7.9e-84 314.3 235 65.5
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 1.1e-82 310.5 232 65.9
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 3.3e-82 308.9 226 66.4
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 4.3e-82 308.5 226 66.8
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 1.6e-81 306.6 170 92.4
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 2.2e-81 306.2 245 64.9
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 2.2e-78 296.2 199 71.9
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 8.5e-78 294.3 221 64.7
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 5.1e-75 285.0 202 79.7
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 5.1e-75 285.0 237 63.3
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 6.1e-68 261.5 291 52.2
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 8.8e-67 257.7 234 58.1
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 3.3e-66 255.8 235 59.1
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 5.7e-66 255.0 222 57.7
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 2.8e-65 252.7 142 88.0
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 2.4e-64 249.6 234 56.4
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 3.1e-64 249.2 452 36.9
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 1.0e-62 244.2 223 56.1
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 1.7e-62 243.4 244 51.6
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 7.2e-61 238.0 142 78.2
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.2e-60 237.3 236 51.3
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 1.0e-59 234.2 142 78.9
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 3.3e-58 229.2 142 75.4
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 8.2e-57 224.6 210 62.9
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 4.5e-55 218.8 142 72.5
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 1.5e-50 203.8 209 57.4
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 2.6e-50 203.0 228 53.1
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 4.4e-50 202.2 128 75.0
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 3.4e-42 176.0 242 42.1
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 2.8e-36 156.4 80 97.5
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 3.0e-35 152.9 129 58.9
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 3.4e-34 149.4 141 55.3
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 6.4e-33 145.2 248 35.5
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 7.3e-29 131.7 105 60.0
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 7.3e-29 131.7 139 45.3
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 4.4e-26 122.5 101 62.4
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 6.0e-23 112.1 92 59.8
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 1.5e-18 97.4 55 85.5
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 5.4e-16 89.0 77 51.9
Psat2g069600 Pisum sativum HOM05D000263 ORTHO05D009363 3.9e-14 82.8 52 82.7
Potri.002G030701 Populus trichocarpa HOM05D001587 ORTHO05D014867 6.6e-14 82.0 108 44.4
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.1e-13 81.3 129 34.9
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.8e-11 72.0 58 60.3
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.8e-11 72.0 58 60.3
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.8e-11 72.0 58 60.3
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.8e-11 72.0 58 60.3
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.8e-11 72.0 58 60.3
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 6.8e-11 72.0 50 68.0
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 6.8e-11 72.0 50 68.0
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 8.9e-11 71.6 58 60.3
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.6e-10 70.1 58 58.6
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 4.4e-10 69.3 58 58.6
Sabra02G0024500 Salix brachista HOM05D001587 ORTHO05D037360 5.4e-08 62.4 38 68.4


User provided reference genes

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