Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s444g0080 Pisum sativum HOM05D002199 ORTHO05D007829 1.4e-69 266.2 133 100.0
Psat2g147400 Pisum sativum HOM05D000684 ORTHO05D022822 6.9e-69 263.8 132 99.2
Psat3g089560 Pisum sativum HOM05D002199 ORTHO05D007829 1.5e-63 246.1 132 93.9
Psat6g165880 Pisum sativum HOM05D002199 ORTHO05D007829 1.8e-48 196.1 123 82.9
Medtr1g088720 Medicago truncatula HOM05D002199 ORTHO05D007829 2.6e-36 155.6 128 67.2
TPR.G34015 Trifolium pratense HOM05D002199 ORTHO05D007829 6.3e-30 134.4 134 59.7
Ca_10349_v3 Cicer arietinum L. HOM05D002199 ORTHO05D007829 5.3e-29 131.3 121 62.8
Glyma.02G155200 Glycine max HOM05D002199 ORTHO05D007829 2.8e-22 109.0 131 48.1
VMungo0720G0513 Vigna mungo HOM05D002199 ORTHO05D007829 2.8e-22 109.0 119 51.3
Phvul.007G144100 Phaseolus vulgaris HOM05D002199 ORTHO05D007829 1.8e-21 106.3 129 50.4
arahy.Tifrunner.gnm1.ann1.Y4MBDE Arachis hypogaea HOM05D002199 ORTHO05D007829 2.4e-21 105.9 134 47.8
Glyma.10G019200 Glycine max HOM05D002199 ORTHO05D007829 3.1e-21 105.5 130 48.5
Lj5g0020775 Lotus japonicus HOM05D002199 ORTHO05D007829 3.8e-19 98.6 133 46.6
arahy.Tifrunner.gnm1.ann1.9JI5AA Arachis hypogaea HOM05D002199 ORTHO05D007829 6.6e-19 97.8 119 48.7
Lalb_Chr06g0163421 Lupinus albus HOM05D002199 ORTHO05D007829 1.6e-12 76.6 103 45.6
MD11G1305800 Malus domestica HOM05D002199 ORTHO05D007829 2.8e-09 65.9 109 38.5
Duzib138G0111 Durio zibethinus HOM05D002199 ORTHO05D007829 2.3e-08 62.8 81 44.4
Thecc.01G298000 Theobroma cacao HOM05D002199 ORTHO05D007829 2.3e-08 62.8 80 46.2
Manes.01G217500 Manihot esculenta HOM05D002199 ORTHO05D007829 8.9e-08 60.8 71 46.5
Sabra14G0097300 Salix brachista HOM05D002199 ORTHO05D007829 8.9e-08 60.8 94 39.4
CANSAT25G3595 Cannabis sativa HOM05D002199 ORTHO05D007829 2.0e-07 59.7 81 42.0
Potri.014G130800 Populus trichocarpa HOM05D002199 ORTHO05D007829 2.6e-07 59.3 96 38.5
CANSAT25G0223 Cannabis sativa HOM05D002199 ORTHO05D007829 7.5e-07 57.8 81 40.7
Gohir.A12G131500 Gossypium hirsutum HOM05D002199 ORTHO05D007829 9.8e-07 57.4 81 42.0
Haze_04909 Corylus avellana HOM05D002199 ORTHO05D007829 1.3e-06 57.0 95 38.9
Gorai.008G146300 Gossypium raimondii HOM05D002199 ORTHO05D007829 2.2e-06 56.2 98 39.8
Gohir.D12G135300 Gossypium hirsutum HOM05D002199 ORTHO05D007829 2.9e-06 55.8 96 40.6
Aqoxy5G01396 Aquilegia oxysepala HOM05D002199 ORTHO05D007829 4.9e-06 55.1 68 42.6


User provided reference genes

Program Settings