Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s4440g0080 Pisum sativum HOM05D002129 ORTHO05D002188 0.0e+00 1409.4 1001 100.0
TPR.G6696 Trifolium pratense HOM05D002129 ORTHO05D002188 2.0e-64 251.9 347 62.8
Ca_24520_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 3.3e-46 191.4 318 46.5
LjContig00312_ERROPOS870357g0010036 Lotus japonicus HOM05D002129 ORTHO05D002188 1.5e-35 156.0 280 40.7
Lalb_Chr05g0224251 Lupinus albus HOM05D002129 ORTHO05D002188 1.6e-24 119.4 275 33.1
TPR.G3398 Trifolium pratense HOM05D002129 ORTHO05D002188 6.7e-23 114.0 435 28.0
Ca_17496_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 2.8e-21 108.6 359 27.9
Lj4g0006933 Lotus japonicus HOM05D002129 ORTHO05D002188 1.4e-20 106.3 424 25.9
Glyma.05G215000 Glycine max HOM05D002129 ORTHO05D002188 2.0e-19 102.4 255 35.3
VMungo0251G1783 Vigna mungo HOM05D002129 ORTHO05D002188 2.6e-19 102.1 275 30.5
Lalb_Chr16g0376981 Lupinus albus HOM05D002129 ORTHO05D002188 5.8e-19 100.9 131 49.6
Glyma.08G021300 Glycine max HOM05D002129 ORTHO05D002188 1.3e-18 99.8 249 34.5
Phvul.002G296200 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 3.8e-18 98.2 361 31.9
Medtr8g099265 Medicago truncatula HOM05D002129 ORTHO05D002188 4.9e-18 97.8 387 31.5
arahy.Tifrunner.gnm1.ann1.X2XLI1 Arachis hypogaea HOM05D002129 ORTHO05D002188 1.0e-15 90.1 369 31.7
Psat7g027480 Pisum sativum HOM05D002129 ORTHO05D002188 2.3e-15 89.0 164 38.4
Thecc.03G293100 Theobroma cacao HOM05D002129 ORTHO05D002188 1.1e-14 86.7 261 31.4
Atru.chr9.2043 Acer truncatum HOM05D002129 ORTHO05D002188 2.8e-13 82.0 285 27.7
Duzib205G1563 Durio zibethinus HOM05D002129 ORTHO05D002188 2.8e-13 82.0 259 27.8
TWI15G0725 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 3.7e-13 81.6 279 29.7
PGSC0003DMG400004988 Solanum tuberosum HOM05D002129 ORTHO05D002188 8.1e-13 80.5 424 25.0
VMungo1215G3208 Vigna mungo HOM05D002129 ORTHO05D002188 4.0e-12 78.2 231 36.8
FAN18G1710 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.0e-11 75.9 320 26.2
CsaV3_4G006410 Cucumis sativus L. HOM05D002129 ORTHO05D002188 3.4e-11 75.1 267 25.5
FAN18G4347 Fragaria x ananassa HOM05D002129 ORTHO05D002188 3.4e-11 75.1 320 26.2
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 7.6e-11 73.9 311 26.7
Sopen12g028580 Solanum pennellii HOM05D002129 ORTHO05D002188 1.0e-10 73.6 444 24.3
AT5G41780 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 2.2e-10 72.4 329 24.6
MELO3C016309.2 Cucumis melo HOM05D002129 ORTHO05D002188 3.8e-10 71.6 267 25.1
CANSAT21G0822 Cannabis sativa HOM05D002129 ORTHO05D002188 1.1e-09 70.1 320 26.6
FvH4_5g04071 Fragaria vesca HOM05D002129 ORTHO05D002188 1.1e-09 70.1 511 21.9
RcHm_v2.0_Chr7g0195441 Rosa chinensis HOM05D002129 ORTHO05D002188 1.1e-09 70.1 277 28.2
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.4e-09 69.7 276 27.2
arahy.Tifrunner.gnm1.ann1.CM611Z Arachis hypogaea HOM05D002129 ORTHO05D002188 9.3e-09 67.0 258 26.0
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 9.3e-09 67.0 265 26.8
BcaC08g44555 Brassica carinata HOM05D002129 ORTHO05D002188 1.2e-08 66.6 165 35.2
BolC6t37201H Brassica oleracea HOM05D002129 ORTHO05D002188 1.6e-08 66.2 165 34.5
QL12p009828 Quercus lobata HOM05D002129 ORTHO05D002188 1.6e-08 66.2 132 37.9
QL12p010595 Quercus lobata HOM05D002129 ORTHO05D002188 1.6e-08 66.2 132 37.9
Duzib084G0477 Durio zibethinus HOM05D002129 ORTHO05D002188 2.1e-08 65.9 495 24.2
Solyc12g056060.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 2.1e-08 65.9 346 24.0
BcaB02g07879 Brassica carinata HOM05D002129 ORTHO05D002188 3.5e-08 65.1 171 32.7
Ciclev10024006m.g Citrus clementina HOM05D002129 ORTHO05D002188 3.5e-08 65.1 82 45.1
CSS0006894 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 6.0e-08 64.3 120 35.8
FAN04G1467 Fragaria x ananassa HOM05D002129 ORTHO05D002188 6.0e-08 64.3 502 22.1
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 6.0e-08 64.3 99 39.4
Duzib068G0910 Durio zibethinus HOM05D002129 ORTHO05D002188 7.9e-08 63.9 489 24.9
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 7.9e-08 63.9 293 28.3
Cpa.g.sc122.43 Carica papaya HOM05D002129 ORTHO05D002188 1.0e-07 63.5 506 24.3
BraA07t29778Z Brassica rapa HOM05D002129 ORTHO05D002188 2.3e-07 62.4 163 33.1
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.3e-07 62.4 166 33.1
A07p20910 Brassica napus HOM05D002129 ORTHO05D002188 3.9e-07 61.6 126 35.7
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 3.9e-07 61.6 166 33.1
Phvul.002G163000 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 3.9e-07 61.6 148 38.5
MSTRG.11936 Avicennia marina HOM05D002129 ORTHO05D002188 5.1e-07 61.2 163 31.3
BolC6t37202H Brassica oleracea HOM05D002129 ORTHO05D002188 5.1e-07 61.2 129 35.7
HanXRQChr10g0292651 Helianthus annuus HOM05D002129 ORTHO05D002188 5.1e-07 61.2 266 28.2
Peaxi162Scf00102g00176 Petunia axillaris HOM05D002129 ORTHO05D002188 5.1e-07 61.2 264 29.5
Lj8P210T83 Lonicera japonica HOM05D002129 ORTHO05D002188 6.7e-07 60.8 99 41.4
vmacro11445 Vaccinium macrocarpon HOM05D001971 ORTHO05D003057 6.7e-07 60.8 279 28.0
Oeu042385.1 Olea europaea HOM05D002129 ORTHO05D002188 8.7e-07 60.5 93 40.9
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 2.5e-06 58.9 57 50.9
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 3.3e-06 58.5 140 32.1
Gorai.004G135400 Gossypium raimondii HOM05D002129 ORTHO05D002188 3.3e-06 58.5 371 26.1
MD06G1102200 Malus domestica HOM05D002129 ORTHO05D002188 3.3e-06 58.5 477 24.7
QL02p031447 Quercus lobata HOM05D002129 ORTHO05D002188 9.6e-06 57.0 266 24.8
Sed0023438 Sechium edule HOM05D002129 ORTHO05D002188 9.6e-06 57.0 257 24.1


User provided reference genes

Program Settings