Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 1.8e-125 452.6 227 100.0
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 4.0e-109 398.3 227 87.2
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 2.1e-105 386.0 227 85.0
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.2e-102 376.7 227 83.3
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.0e-96 357.1 218 79.4
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 1.9e-95 352.8 223 79.4
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 1.3e-94 350.1 218 79.4
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 1.4e-93 346.7 222 78.8
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 5.3e-93 344.7 223 76.7
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 4.4e-92 341.7 223 75.8
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 7.1e-82 307.8 217 68.2
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 6.7e-80 301.2 217 68.7
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 1.1e-79 300.4 217 68.2
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 1.5e-79 300.1 217 67.3
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 9.6e-79 297.4 217 67.3
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 2.1e-78 296.2 215 66.0
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 6.2e-78 294.7 217 65.9
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.4e-77 293.5 217 65.4
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 3.1e-77 292.4 214 65.0
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.2e-76 290.4 214 64.5
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.5e-76 290.0 216 63.0
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 2.0e-76 289.7 214 64.5
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 2.6e-76 289.3 216 65.3
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 1.7e-75 286.6 216 66.7
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.4e-74 283.5 217 64.1
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 1.4e-74 283.5 219 63.0
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 1.9e-74 283.1 214 66.4
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 4.2e-74 282.0 217 64.1
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 7.1e-74 281.2 217 63.1
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.6e-73 280.0 217 64.5
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.7e-73 279.3 212 62.3
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 3.5e-73 278.9 217 62.2
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 6.0e-73 278.1 212 62.3
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 1.0e-72 277.3 214 62.1
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 1.5e-71 273.5 212 63.2
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 4.3e-71 271.9 138 98.6
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 1.6e-70 270.0 222 61.3
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 4.8e-70 268.5 217 60.8
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 6.2e-70 268.1 215 61.4
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.1e-69 267.3 221 60.6
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 1.1e-69 267.3 213 61.0
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 5.3e-69 265.0 213 61.0
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 6.9e-69 264.6 213 59.6
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 9.0e-69 264.2 217 61.3
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 1.2e-68 263.8 214 62.1
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 1.5e-68 263.5 219 59.4
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.4e-68 262.3 221 59.7
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 4.5e-68 261.9 206 62.1
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 5.8e-68 261.5 216 61.1
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 5.8e-68 261.5 214 60.3
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 1.0e-67 260.8 213 61.0
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 1.7e-67 260.0 217 62.7
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 2.9e-67 259.2 216 60.6
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 5.0e-67 258.5 209 58.9
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.6e-65 253.4 212 59.9
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 3.5e-65 252.3 220 57.7
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 7.9e-65 251.1 215 59.5
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.0e-64 250.8 218 58.3
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 1.0e-64 250.8 212 60.4
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.0e-64 250.8 218 61.5
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.3e-64 250.4 212 60.4
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.8e-64 250.0 214 60.7
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.3e-64 249.6 212 60.4
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 3.0e-64 249.2 212 60.8
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 5.1e-64 248.4 218 59.6
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 5.1e-64 248.4 213 58.2
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 5.1e-64 248.4 138 92.0
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 6.7e-64 248.1 215 59.1
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 6.7e-64 248.1 220 57.3
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 6.7e-64 248.1 215 58.6
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 6.7e-64 248.1 212 59.4
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 8.7e-64 247.7 215 58.1
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 1.1e-63 247.3 222 56.8
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 1.1e-63 247.3 222 56.8
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.1e-63 247.3 209 60.3
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.9e-63 246.5 215 58.6
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.9e-63 246.5 214 58.4
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 7.4e-63 244.6 220 57.3
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 7.4e-63 244.6 220 56.8
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 3.7e-62 242.3 220 53.6
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 1.4e-61 240.4 216 57.4
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.8e-61 240.0 214 58.4
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 2.4e-61 239.6 228 55.3
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.1e-61 239.2 214 58.4
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 5.3e-61 238.4 215 58.6
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 2.6e-60 236.1 181 65.7
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.3e-59 233.8 176 63.6
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 3.8e-59 232.3 205 58.5
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 7.2e-58 228.0 170 64.7
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 2.2e-54 216.5 210 52.4
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.8e-54 215.3 200 56.0
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 9.1e-53 211.1 143 76.2
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 1.4e-50 203.8 231 46.3
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.0e-48 197.6 219 48.4
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.4e-48 197.2 226 47.8
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 8.8e-48 194.5 217 46.5
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 4.4e-47 192.2 216 49.1
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 2.2e-46 189.9 216 46.8
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 6.3e-46 188.3 214 47.7
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 3.1e-45 186.0 219 42.9
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.0e-44 183.3 211 46.0
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 3.8e-43 179.1 212 44.8
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 4.7e-41 172.2 156 55.8
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 1.7e-38 163.7 154 48.7
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 5.3e-37 158.7 160 48.8
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.0e-35 154.5 151 47.7
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 1.1e-34 151.0 89 80.9
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 1.5e-31 140.6 142 54.9
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 9.8e-31 137.9 168 46.4
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 1.5e-23 114.0 92 55.4
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 3.4e-23 112.8 81 58.0
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 7.5e-23 111.7 83 67.5
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 3.7e-22 109.4 76 71.1
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 1.6e-17 94.0 79 55.7
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 2.3e-08 63.5 172 30.8
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 6.4e-06 55.5 161 28.0


User provided reference genes

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