Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3401g0080 Pisum sativum HOM05D001104 ORTHO05D006624 3.6e-117 424.9 207 100.0
Psat1g057160 Pisum sativum HOM05D001104 ORTHO05D006624 1.6e-72 276.6 145 94.5
Medtr6g007040 Medicago truncatula HOM05D001104 ORTHO05D006624 2.2e-69 266.2 145 89.7
arahy.Tifrunner.gnm1.ann1.PA6DSG Arachis hypogaea HOM05D001104 ORTHO05D006624 2.4e-68 262.7 145 87.6
Ca_04192_v3 Cicer arietinum L. HOM05D001104 ORTHO05D006624 4.1e-68 261.9 145 87.6
Phvul.004G013700 Phaseolus vulgaris HOM05D001104 ORTHO05D006624 4.5e-67 258.5 145 86.2
Lj2g0012499 Lotus japonicus HOM05D001104 ORTHO05D006624 1.3e-66 256.9 145 85.5
VMungo0464G0407 Vigna mungo HOM05D001104 ORTHO05D006624 6.5e-66 254.6 145 84.1
arahy.Tifrunner.gnm1.ann1.S5BZSG Arachis hypogaea HOM05D001104 ORTHO05D006624 9.4e-65 250.8 165 77.0
Glyma.19G007900 Glycine max HOM05D001104 ORTHO05D006624 1.0e-63 247.3 145 82.1
Lalb_Chr06g0176011 Lupinus albus HOM05D001104 ORTHO05D006624 3.0e-63 245.7 145 80.0
Potri.001G348700 Populus trichocarpa HOM05D001104 ORTHO05D006624 2.0e-59 233.0 145 77.9
Cpa.g.sc215.8 Carica papaya HOM05D001104 ORTHO05D006624 1.0e-58 230.7 145 75.2
Sed0005946 Sechium edule HOM05D001104 ORTHO05D006624 2.2e-58 229.6 145 76.6
Ciclev10015353m.g Citrus clementina HOM05D001104 ORTHO05D006624 5.0e-58 228.4 145 74.5
TWI12G0063 Tripterygium wilfordii HOM05D001104 ORTHO05D006624 5.0e-58 228.4 145 75.2
MELO3C021546.2 Cucumis melo HOM05D001104 ORTHO05D006624 1.5e-57 226.9 147 76.9
CiPaw.03G038600 Carya illinoinensis HOM05D001104 ORTHO05D006624 1.9e-57 226.5 145 74.5
CsaV3_5G027380 Cucumis sativus L. HOM05D001104 ORTHO05D006624 2.5e-57 226.1 147 76.2
Atru.chr6.2305 Acer truncatum HOM05D001104 ORTHO05D006624 9.4e-57 224.2 145 73.8
ClCG09G018970 Citrullus lanatus HOM05D001104 ORTHO05D006624 1.6e-56 223.4 141 75.9
Dinv35069 Davidia involucrata HOM05D001104 ORTHO05D006624 2.1e-56 223.0 145 73.8
Cc07_g02180 Coffea canephora HOM05D001104 ORTHO05D006624 2.7e-56 222.6 145 73.8
Duzib147G0036 Durio zibethinus HOM05D001104 ORTHO05D006624 3.6e-56 222.2 145 73.8
Manes.17G117000 Manihot esculenta HOM05D001104 ORTHO05D006624 3.6e-56 222.2 145 73.8
Thecc.04G010000 Theobroma cacao HOM05D001104 ORTHO05D006624 8.0e-56 221.1 145 73.1
Peaxi162Scf00933g00005 Petunia axillaris HOM05D001104 ORTHO05D006624 1.0e-55 220.7 145 71.7
CAN.G973.9 Capsicum annuum HOM05D001104 ORTHO05D006624 1.4e-55 220.3 145 71.7
Nitab4.5_0001709g0040 Nicotiana tabacum HOM05D001104 ORTHO05D006624 1.4e-55 220.3 145 71.7
CSS0024274 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.8e-55 219.9 145 72.4
CSS0039746 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.8e-55 219.9 145 72.4
Prupe.3G285400 Prunus persica HOM05D001104 ORTHO05D006624 1.8e-55 219.9 154 70.1
Hma1.2p1_0993F.1_g245480 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 3.0e-55 219.2 145 73.1
Rhsim10G0021500 Rhododendron simsii HOM05D001104 ORTHO05D006624 3.0e-55 219.2 145 73.1
Eucgr.I01793 Eucalyptus grandis HOM05D001104 ORTHO05D006624 4.0e-55 218.8 145 72.4
MSTRG.15512 Avicennia marina HOM05D001104 ORTHO05D006624 5.2e-55 218.4 145 70.3
Haze_14675 Corylus avellana HOM05D001104 ORTHO05D006624 5.2e-55 218.4 145 73.8
Actinidia35743 Actinidia chinensis HOM05D001104 ORTHO05D006624 8.8e-55 217.6 145 71.0
Lj7C592G4 Lonicera japonica HOM05D001104 ORTHO05D006624 8.8e-55 217.6 141 73.0
Solyc02g067740.4 Solanum lycopersicum HOM05D001104 ORTHO05D006624 8.8e-55 217.6 146 71.9
Sopen02g016860 Solanum pennellii HOM05D001104 ORTHO05D006624 8.8e-55 217.6 146 71.9
GSVIVG01032469001 Vitis vinifera HOM05D001104 ORTHO05D006624 1.2e-54 217.2 145 71.0
Actinidia06020 Actinidia chinensis HOM05D001104 ORTHO05D006624 2.0e-54 216.5 145 71.7
ECA238G2799 Erigeron canadensis HOM05D001104 ORTHO05D006624 2.6e-54 216.1 145 70.3
PGSC0003DMG400006955 Solanum tuberosum HOM05D001104 ORTHO05D006624 2.6e-54 216.1 146 71.9
Gohir.D07G227400 Gossypium hirsutum HOM05D001104 ORTHO05D006624 4.4e-54 215.3 145 71.0
Gorai.001G262300 Gossypium raimondii HOM05D001104 ORTHO05D006624 4.4e-54 215.3 145 71.0
vmacro05831 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 4.4e-54 215.3 141 73.0
Migut.H00115 Erythranthe guttata HOM05D001104 ORTHO05D006624 5.7e-54 214.9 145 69.7
Dinv33487 Davidia involucrata HOM05D001104 ORTHO05D006624 7.5e-54 214.5 145 70.3
QL02p076349 Quercus lobata HOM05D001104 ORTHO05D006624 7.5e-54 214.5 145 71.0
TAR374G1405 Trochodendron aralioides HOM05D001104 ORTHO05D006624 9.8e-54 214.2 145 69.7
Nn4g22776 Nelumbo nucifera HOM05D001104 ORTHO05D006624 1.3e-53 213.8 145 69.0
PSO017G6424 Papaver somniferum HOM05D001104 ORTHO05D006624 1.7e-53 213.4 145 71.0
CANSAT64G0855 Cannabis sativa HOM05D001104 ORTHO05D006624 3.7e-53 212.2 145 72.4
COL.COLO4_28978 Corchorus olitorius HOM05D001104 ORTHO05D006624 3.7e-53 212.2 146 72.6
Nitab4.5_0001125g0070 Nicotiana tabacum HOM05D001104 ORTHO05D006624 3.7e-53 212.2 146 71.2
PSO478G3469 Papaver somniferum HOM05D001104 ORTHO05D006624 4.8e-53 211.8 145 70.3
CARHR149500 Cardamine hirsuta HOM05D001104 ORTHO05D006624 6.3e-53 211.5 145 68.3
MD09G1032600 Malus domestica HOM05D001104 ORTHO05D006624 8.3e-53 211.1 166 63.3
Oeu062922.1 Olea europaea HOM05D001104 ORTHO05D006624 8.3e-53 211.1 145 67.6
Aa31LG2G4840 Aethionema arabicum HOM05D001104 ORTHO05D006285 1.1e-52 210.7 180 60.0
Gohir.A07G220700 Gossypium hirsutum HOM05D001104 ORTHO05D006624 1.4e-52 210.3 145 69.7
RcHm_v2.0_Chr2g0171701 Rosa chinensis HOM05D001104 ORTHO05D006624 1.4e-52 210.3 160 67.5
MD17G1034200 Malus domestica HOM05D001104 ORTHO05D006624 2.4e-52 209.5 166 63.3
DCAR_011201 Daucus carota HOM05D001104 ORTHO05D006624 5.4e-52 208.4 145 66.9
THA.LOC104825337 Tarenaya hassleriana HOM05D001104 ORTHO05D006624 5.4e-52 208.4 145 67.6
Sp2g16980 Schrenkiella parvula HOM05D001104 ORTHO05D006624 1.2e-51 207.2 145 68.3
ECA232G2826 Erigeron canadensis HOM05D001104 ORTHO05D006624 1.6e-51 206.8 145 66.9
SalBow1G5303 Salvia bowleyana HOM05D001104 ORTHO05D006624 2.7e-51 206.1 145 65.5
AT3G27930 Arabidopsis thaliana HOM05D001104 ORTHO05D006624 4.5e-51 205.3 145 68.3
MBI16_g05636_MAGBIO Magnolia biondii HOM05D001104 ORTHO05D006624 5.9e-51 204.9 155 62.6
BcaC06g33770 Brassica carinata HOM05D001104 ORTHO05D006624 7.7e-51 204.5 145 66.9
C07p37130 Brassica napus HOM05D001104 ORTHO05D006624 7.7e-51 204.5 145 66.9
unitig_899.g15491 Utricularia gibba HOM05D000928 ORTHO05D001186 7.7e-51 204.5 173 56.6
HanXRQChr14g0450311 Helianthus annuus HOM05D001104 ORTHO05D006624 1.0e-50 204.1 145 66.2
AL5G17430 Arabidopsis lyrata HOM05D001104 ORTHO05D006624 1.7e-50 203.4 145 66.9
BcaC06g30950 Brassica carinata HOM05D001104 ORTHO05D006624 1.7e-50 203.4 145 66.9
Thhalv10004293m.g Eutrema salsugineum HOM05D001104 ORTHO05D006624 1.7e-50 203.4 145 69.0
Carub.0005s0650 Capsella rubella HOM05D001104 ORTHO05D006624 3.8e-50 202.2 145 65.5
Hma1.2p1_3249F.1_g334430 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 6.5e-50 201.4 137 70.8
HanXRQChr09g0266171 Helianthus annuus HOM05D001104 ORTHO05D006624 8.6e-50 201.1 145 65.5
FAN05G2035 Fragaria x ananassa HOM05D001104 ORTHO05D006624 1.1e-49 200.7 160 62.5
FvH4_6g50760 Fragaria vesca HOM05D001104 ORTHO05D006624 1.5e-49 200.3 160 63.1
FAN14G0697 Fragaria x ananassa HOM05D001104 ORTHO05D006624 1.5e-49 200.3 160 63.1
Lsat_1_v5_gn_4_182480 Lactuca sativa HOM05D001104 ORTHO05D006624 1.9e-49 199.9 147 65.3
PGR142G0881 Punica granatum HOM05D001104 ORTHO05D006624 5.5e-49 198.4 148 66.2
EL10Ac4g08579 Beta vulgaris HOM05D001104 ORTHO05D006624 1.6e-48 196.8 145 61.4
DCAR_015045 Daucus carota HOM05D001104 ORTHO05D006624 2.8e-48 196.1 145 62.8
ATR0730G148 Amborella trichopoda HOM05D001104 ORTHO05D006624 4.7e-48 195.3 145 64.1
Hund10304 Selenicereus undatus HOM05D001104 ORTHO05D006624 6.1e-48 194.9 145 61.4
Cfa007422 Carpinus fangiana HOM05D001104 ORTHO05D006624 1.4e-47 193.7 132 72.7
Aqoxy3G01030 Aquilegia oxysepala HOM05D001104 ORTHO05D006624 2.6e-46 189.5 145 64.1
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 4.9e-45 185.3 139 65.5
CSS0016338 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 6.3e-45 184.9 135 66.7
AUR62029365 Chenopodium quinoa HOM05D001104 ORTHO05D006624 1.1e-44 184.1 137 61.3
Os05g0577800 Oryza sativa ssp. japonica HOM05D001104 ORTHO05D006624 1.4e-44 183.7 155 55.5
Zm00001eb344500 Zea mays HOM05D001104 ORTHO05D006624 3.1e-44 182.6 156 56.4
CDE06G1183 Ceratophyllum demersum HOM05D001104 ORTHO05D006624 1.6e-43 180.3 164 54.9
Oeu043054.1 Olea europaea HOM05D001104 ORTHO05D006285 8.6e-42 174.5 140 62.1
vmacro18250 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 1.9e-41 173.3 119 66.4
Rhsim08G0054100 Rhododendron simsii HOM05D001104 ORTHO05D006285 1.6e-40 170.2 115 68.7
A02p35680 Brassica napus HOM05D001104 ORTHO05D006624 4.1e-36 155.6 142 55.6
BolC2t11515H Brassica oleracea HOM05D001104 ORTHO05D006624 5.4e-36 155.2 113 65.5
A06p40780 Brassica napus HOM05D001104 ORTHO05D006624 1.2e-35 154.1 99 70.7
SGA_v2.0_scaffold135G34875 Striga asiatica HOM05D001104 ORTHO05D006624 1.6e-35 153.7 111 65.8
BraA02t08570Z Brassica rapa HOM05D001104 ORTHO05D006624 3.5e-35 152.5 99 70.7
Psat1g219520 Pisum sativum HOM05D001104 ORTHO05D006624 8.6e-34 147.9 87 86.2
Pp3c25_9610 Physcomitrium patens HOM05D001104 ORTHO05D006624 1.5e-33 147.1 149 48.3
AagrBONN_evm.TU.Sc2ySwM_340.221 Anthoceros agrestis HOM05D001104 ORTHO05D006624 1.9e-33 146.7 148 48.0
HPP92_024321 Vanilla planifolia HOM05D001104 ORTHO05D006285 5.6e-33 145.2 112 59.8
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 1.6e-32 143.7 140 53.6
Os05g0577900 Oryza sativa ssp. japonica HOM05D001104 ORTHO05D006624 1.5e-30 137.1 145 45.5
FAN02G3192 Fragaria x ananassa HOM05D001104 ORTHO05D006624 2.9e-29 132.9 215 40.5
CSS0012459 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.3e-26 124.0 136 47.8
Sc03g0007930 Simmondsia chinensis HOM05D001104 ORTHO05D006624 5.1e-26 122.1 87 64.4
HanXRQChr06g0175561 Helianthus annuus HOM05D001104 ORTHO05D006624 2.5e-25 119.8 87 63.2
AUR62043218 Chenopodium quinoa HOM05D001104 ORTHO05D006624 1.1e-23 114.4 91 57.1
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 3.1e-23 112.8 148 42.6
Actinidia36089 Actinidia chinensis HOM05D001104 ORTHO05D006624 2.7e-19 99.8 68 67.6
TPR.G18830 Trifolium pratense HOM05D001104 ORTHO05D006624 2.0e-14 83.6 44 93.2
Thecc.04G111800 Theobroma cacao HOM05D001104 ORTHO05D006624 2.9e-13 79.7 64 56.2
Oeu043225.1 Olea europaea HOM05D003428 ORTHO05D006624 1.2e-11 74.3 58 60.3
Oeu051906.1 Olea europaea HOM05D003428 ORTHO05D006624 1.2e-11 74.3 58 60.3
Glyma.05G007402 Glycine max HOM05D001104 ORTHO05D006624 7.3e-09 65.1 40 82.5
SEGI_37884 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 7.6e-06 55.1 68 41.2


User provided reference genes

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